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March 22, 2019 14:05
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Save & load from a pandas DataFrame/Series
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import numpy.lib | |
import numpy as np | |
import pandas as pd | |
import cPickle as pickle | |
def save_pandas(fname, data): | |
'''Save DataFrame or Series | |
Parameters | |
---------- | |
fname : str | |
filename to use | |
data: Pandas DataFrame or Series | |
''' | |
np.save(open(fname, 'w'), data) | |
if len(data.shape) == 2: | |
meta = data.index,data.columns | |
elif len(data.shape) == 1: | |
meta = (data.index,) | |
else: | |
raise ValueError('save_pandas: Cannot save this type') | |
s = pickle.dumps(meta) | |
s = s.encode('string_escape') | |
with open(fname, 'a') as f: | |
f.seek(0, 2) | |
f.write(s) | |
def load_pandas(fname, mmap_mode='r'): | |
'''Load DataFrame or Series | |
Parameters | |
---------- | |
fname : str | |
filename | |
mmap_mode : str, optional | |
Same as numpy.load option | |
''' | |
values = np.load(fname, mmap_mode=mmap_mode) | |
with open(fname) as f: | |
numpy.lib.format.read_magic(f) | |
numpy.lib.format.read_array_header_1_0(f) | |
f.seek(values.dtype.alignment*values.size, 1) | |
meta = pickle.loads(f.readline().decode('string_escape')) | |
if len(meta) == 2: | |
return pd.DataFrame(values, index=meta[0], columns=meta[1]) | |
elif len(meta) == 1: | |
return pd.Series(values, index=meta[0]) |
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