luispedro

name: ngless-bench-env
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- subread=1.6.1=0
- bottle=0.12.13=py36_0
- jug=1.6.5=py_0
- pyyaml=3.12=py36_1

luispedro

Verifying that +luispedro is my openname (Bitcoin username). https://onename.com/luispedro

luispedro

luispedro

import numpy.lib
import numpy as np
import pandas as pd
import cPickle as pickle

def save_pandas(fname, data):
    '''Save DataFrame or Series

    Parameters
    ----------

luispedro

import mahotas as mh
from jug import TaskGenerator
from glob import glob

@TaskGenerator
def method1(image):
    image = mh.imread(image)[:,:,0]
    image  = mh.gaussian_filter(image, 2)
    binimage = (image > image.mean())
    labeled, _ = mh.label(binimage)

luispedro

#include <sys/time.h>

#include <utility>
#include <iostream>
#include <complex>
#include <cstdio>
#include <cstdlib>
#include <eigen3/Eigen/Dense>

using namespace Eigen;

luispedro

import numpy as np
from matplotlib import pyplot as plt
def irs_paid(val):
    paid = 0
    def sub0(y, x):
        if (val <= y): return 0;
        if (val < x): return val - y;
        return x - y;
    return sub0(0,7000)*0.145 + sub0(7000,20000)*0.285 + sub0(20000,40000)*0.37 + sub0(40000,80000)*0.45 + (val - 80000 if (val > 80000) else 0) * 0.48;

luispedro

import numpy as np
from matplotlib import pyplot as plt

#### From XKCD plot generator
"""
XKCD plot generator
-------------------
Author: Jake Vanderplas

This is a script that will take any matplotlib line diagram, and convert it

luispedro

# UPDATE IN 2020
# You almost always will want to use the version at
# https://github.com/luispedro/imread, which is
# up-to-date and works with Python 3





# Copyright: Luis Pedro Coelho <[email protected]>, 2012

luispedro

#vim: set ts=4 sts=4 expandtab sw=4:
from sys import argv
import matplotlib as mpl
import matplotlib.pyplot as plt
from math import sqrt
mpl.rcdefaults()

_golden_mean = (sqrt(5)-1.)/2.

bronzetan = '#BD3600'