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00-cavadas-et-al-2016-supplements.md

Cavadas et al., Scientific Reports, 2016 Supplements

This gist pre-processes supplementary data from Cavadas et al. paper in Scientific Reports, citation below:

Cavadas, M.A.S., Mesnieres, M., Crifo, B., Manresa, M.C., Selfridge, A.C., Keogh, C.E., Fabian, Z., Scholz, C.C., Nolan, K.A., Rocha, L.M.A., et al. (2016). REST is a hypoxia-responsive transcriptional repressor. Sci Rep-Uk 6, 31355

Each of the notebooks downloads the data directly from the journal, converts it into an easier-to-work tsv format, and augments it with uniprot, ensembl and entrez identifiers.

The notebooks make extensive use of MyGene.info which can be cited as:

Xin, J., Mark, A., Afrasiabi, C., Tsueng, G., Juchler, M., Gopal, N., Stupp, G., Putman, T., Ainscough, B., Griffith, O., Torkamani, A., Whetzel, P., Mungall, C., Mooney, S., Su, A., Wu, C. (2016). High-performance web services for querying gene and variant annotation Genome Biology 17(1), 91. https://dx.doi.org/10.1186/s13059-016-0953-9

See individual notebooks for more info.

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Cavadas et al., Scientific Reports, 2016 - Suppl. Table 5.ipynb
{
"cells": [
{
"cell_type": "markdown",
"id": "1b95ef81",
"metadata": {},
"source": [
"# Cavadas et al. 2016 - Suppl. Table 5\n",
"\n",
"This notebook augments the data in Suppl. Table 5 of (Cavadas, 2016) which lists REST-responsive genes in HEK293 cells which are induced in hypoxia.\n",
"\n",
"The genes were matched based on their symbols (as provided by Cavadas et al.), or, in cases where that failed, on their Aliases. In case where one symbol mapped to multiple ensembl/uniprot IDs, the mappings were concatenated with a semicolon (;).\n",
"\n",
"References:\n",
"\n",
"- (Cavadas, 2016): Cavadas, M.A.S., Mesnieres, M., Crifo, B., Manresa, M.C., Selfridge, A.C., Keogh, C.E., Fabian, Z., Scholz, C.C., Nolan, K.A., Rocha, L.M.A., et al. (2016). REST is a hypoxia-responsive transcriptional repressor. Sci Rep-Uk 6, 31355.\n",
"- (Xin, 2016): Xin, J., Mark, A., Afrasiabi, C., Tsueng, G., Juchler, M., Gopal, N., Stupp, G., Putman, T., Ainscough, B., Griffith, O., Torkamani, A., Whetzel, P., Mungall, C., Mooney, S., Su, A., Wu, C. (2016). High-performance web services for querying gene and variant annotation Genome Biology 17(1), 91. https://dx.doi.org/10.1186/s13059-016-0953-9"
]
},
{
"cell_type": "code",
"execution_count": 1,
"id": "7d523b97",
"metadata": {},
"outputs": [],
"source": [
"%config InlineBackend.figure_format = 'retina'\n",
"%matplotlib inline\n",
"import os\n",
"import pandas as pd\n",
"import numpy as np\n",
"import seaborn as sns\n",
"from matplotlib import pyplot as plt\n",
"from tqdm import tqdm\n",
"sns.set_palette('Dark2')\n",
"sns.set_style({'axes.axisbelow': True, 'axes.edgecolor': '.15', 'axes.facecolor': 'white',\n",
" 'axes.grid': True, 'axes.labelcolor': '.15', 'axes.linewidth': 1.25, \n",
" 'figure.facecolor': 'white', 'font.family': ['sans-serif'], 'grid.color': '.15',\n",
" 'grid.linestyle': ':', 'grid.alpha': .5, 'image.cmap': 'Greys', \n",
" 'legend.frameon': False, 'legend.numpoints': 1, 'legend.scatterpoints': 1,\n",
" 'lines.solid_capstyle': 'round', 'axes.spines.right': False, 'axes.spines.top': False, \n",
" 'text.color': '.15', 'xtick.top': False, 'ytick.right': False, 'xtick.color': '.15',\n",
" 'xtick.direction': 'out', 'xtick.major.size': 6, 'xtick.minor.size': 3,\n",
" 'ytick.color': '.15', 'ytick.direction': 'out', 'ytick.major.size': 6,'ytick.minor.size': 3})\n",
"sns.set_context('talk')\n",
"\n",
"#http://phyletica.org/matplotlib-fonts/\n",
"import matplotlib\n",
"matplotlib.rcParams['pdf.fonttype'] = 42\n",
"matplotlib.rcParams['ps.fonttype'] = 42"
]
},
{
"cell_type": "markdown",
"id": "a34e6d7a",
"metadata": {},
"source": [
"Download Supplemental Table 5 straight from [Scientific Reports](https://www.nature.com/articles/srep31355#Sec26)"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "91330b4a",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"--2021-04-06 20:52:36-- https://static-content.springer.com/esm/art%3A10.1038%2Fsrep31355/MediaObjects/41598_2016_BFsrep31355_MOESM33_ESM.xls\n",
"Resolving static-content.springer.com (static-content.springer.com)... 151.101.112.95\n",
"Connecting to static-content.springer.com (static-content.springer.com)|151.101.112.95|:443... connected.\n",
"HTTP request sent, awaiting response... 200 OK\n",
"Length: 30720 (30K) [application/octet-stream]\n",
"Saving to: ‘cavadas-et-al-2016-suppl-table-5.xls’\n",
"\n",
"cavadas-et-al-2016- 100%[===================>] 30,00K --.-KB/s in 0,008s \n",
"\n",
"2021-04-06 20:52:36 (3,49 MB/s) - ‘cavadas-et-al-2016-suppl-table-5.xls’ saved [30720/30720]\n",
"\n"
]
}
],
"source": [
"!wget https://static-content.springer.com/esm/art%3A10.1038%2Fsrep31355/MediaObjects/41598_2016_BFsrep31355_MOESM33_ESM.xls -O cavadas-et-al-2016-suppl-table-5.xls"
]
},
{
"cell_type": "markdown",
"id": "2939d032",
"metadata": {},
"source": [
"Read the data in pandas"
]
},
{
"cell_type": "code",
"execution_count": 3,
"id": "0b39183c",
"metadata": {},
"outputs": [],
"source": [
"cavadas_et_al_results = pd.read_excel('cavadas-et-al-2016-suppl-table-5.xls', skiprows=4)\n",
"cavadas_et_al_results = cavadas_et_al_results.dropna(axis=1, how='all') #drop empty columns\n",
"new_columns = ['gene_id']\n",
"new_columns += [f'ctrl_rnai_1pct_vs_21pct_{c}' for c in ['edger_log2_fc', 'edger_q', 'cuffdiff_log2_fc', 'cuffdiff_q']]\n",
"new_columns += [f'rest_rnai_1pct_vs_21pct_{c}' for c in ['edger_log2_fc', 'edger_q', 'cuffdiff_log2_fc', 'cuffdiff_q']]\n",
"new_columns += [f'rest_rnai_1pct_vs_ctrl_1pct_{c}' for c in ['edger_log2_fc', 'edger_q', 'cuffdiff_log2_fc', 'cuffdiff_q']]\n",
"\n",
"cavadas_et_al_results.columns = new_columns\n",
"cavadas_et_al_results = cavadas_et_al_results.set_index('gene_id')"
]
},
{
"cell_type": "code",
"execution_count": 4,
"id": "37a258a1",
"metadata": {},
"outputs": [
{
"data": {
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" <tbody>\n",
" <tr>\n",
" <th>ACSL6</th>\n",
" <td>0.693035</td>\n",
" <td>0.003538</td>\n",
" <td>0.780701</td>\n",
" <td>7.263680e-04</td>\n",
" <td>1.401302</td>\n",
" <td>2.032425e-12</td>\n",
" <td>1.35732</td>\n",
" <td>0.000297</td>\n",
" <td>0.652839</td>\n",
" <td>0.003688</td>\n",
" <td>0.620602</td>\n",
" <td>3.199196e-02</td>\n",
" </tr>\n",
" <tr>\n",
" <th>BSN</th>\n",
" <td>1.112460</td>\n",
" <td>0.000909</td>\n",
" <td>1.099282</td>\n",
" <td>2.182676e-04</td>\n",
" <td>2.630058</td>\n",
" <td>2.177764e-23</td>\n",
" <td>2.63468</td>\n",
" <td>0.000297</td>\n",
" <td>1.510280</td>\n",
" <td>0.003688</td>\n",
" <td>1.530775</td>\n",
" <td>2.831440e-08</td>\n",
" </tr>\n",
" <tr>\n",
" <th>CACNA1B</th>\n",
" <td>0.671965</td>\n",
" <td>0.004034</td>\n",
" <td>0.747851</td>\n",
" <td>2.959385e-03</td>\n",
" <td>2.788085</td>\n",
" <td>8.261890e-59</td>\n",
" <td>2.87760</td>\n",
" <td>0.000297</td>\n",
" <td>2.194900</td>\n",
" <td>0.003688</td>\n",
" <td>2.040234</td>\n",
" <td>2.517821e-37</td>\n",
" </tr>\n",
" <tr>\n",
" <th>CDK5R2</th>\n",
" <td>0.906606</td>\n",
" <td>0.010604</td>\n",
" <td>0.995753</td>\n",
" <td>3.212454e-02</td>\n",
" <td>2.747189</td>\n",
" <td>1.457558e-22</td>\n",
" <td>2.69818</td>\n",
" <td>0.000297</td>\n",
" <td>1.781610</td>\n",
" <td>0.003688</td>\n",
" <td>1.751436</td>\n",
" <td>3.841797e-12</td>\n",
" </tr>\n",
" <tr>\n",
" <th>DLGAP3</th>\n",
" <td>0.752587</td>\n",
" <td>0.000909</td>\n",
" <td>0.694043</td>\n",
" <td>9.614567e-03</td>\n",
" <td>2.155980</td>\n",
" <td>2.843907e-30</td>\n",
" <td>2.09444</td>\n",
" <td>0.000297</td>\n",
" <td>1.332100</td>\n",
" <td>0.003688</td>\n",
" <td>1.461937</td>\n",
" <td>4.783860e-16</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FBXO41</th>\n",
" <td>1.031050</td>\n",
" <td>0.000909</td>\n",
" <td>0.948953</td>\n",
" <td>5.459367e-09</td>\n",
" <td>1.587736</td>\n",
" <td>1.200640e-26</td>\n",
" <td>1.63260</td>\n",
" <td>0.000297</td>\n",
" <td>0.590333</td>\n",
" <td>0.003688</td>\n",
" <td>0.638783</td>\n",
" <td>2.413352e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FNDC5</th>\n",
" <td>0.899575</td>\n",
" <td>0.000909</td>\n",
" <td>0.906137</td>\n",
" <td>5.380895e-05</td>\n",
" <td>1.722907</td>\n",
" <td>8.803560e-22</td>\n",
" <td>1.69674</td>\n",
" <td>0.000297</td>\n",
" <td>0.786390</td>\n",
" <td>0.003688</td>\n",
" <td>0.816770</td>\n",
" <td>7.937957e-06</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FSTL4</th>\n",
" <td>0.673053</td>\n",
" <td>0.013110</td>\n",
" <td>0.739232</td>\n",
" <td>3.237984e-02</td>\n",
" <td>1.900756</td>\n",
" <td>6.090909e-16</td>\n",
" <td>1.88138</td>\n",
" <td>0.000297</td>\n",
" <td>1.196870</td>\n",
" <td>0.003688</td>\n",
" <td>1.161524</td>\n",
" <td>6.264628e-07</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GABBR2</th>\n",
" <td>0.640786</td>\n",
" <td>0.004546</td>\n",
" <td>0.645720</td>\n",
" <td>3.119686e-03</td>\n",
" <td>1.406621</td>\n",
" <td>4.255258e-15</td>\n",
" <td>1.34725</td>\n",
" <td>0.000297</td>\n",
" <td>0.695420</td>\n",
" <td>0.003688</td>\n",
" <td>0.760901</td>\n",
" <td>2.351245e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GPR153</th>\n",
" <td>0.705581</td>\n",
" <td>0.000909</td>\n",
" <td>0.667895</td>\n",
" <td>3.105876e-05</td>\n",
" <td>1.254204</td>\n",
" <td>9.336971e-20</td>\n",
" <td>1.18264</td>\n",
" <td>0.000297</td>\n",
" <td>0.466654</td>\n",
" <td>0.029808</td>\n",
" <td>0.586308</td>\n",
" <td>2.421624e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GPRIN1</th>\n",
" <td>0.478252</td>\n",
" <td>0.022322</td>\n",
" <td>0.477798</td>\n",
" <td>5.594201e-04</td>\n",
" <td>1.239415</td>\n",
" <td>2.815636e-26</td>\n",
" <td>1.21924</td>\n",
" <td>0.000297</td>\n",
" <td>0.730595</td>\n",
" <td>0.003688</td>\n",
" <td>0.761617</td>\n",
" <td>6.955227e-10</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNB1</th>\n",
" <td>1.319140</td>\n",
" <td>0.000909</td>\n",
" <td>0.900296</td>\n",
" <td>4.169021e-02</td>\n",
" <td>2.826425</td>\n",
" <td>7.985477e-25</td>\n",
" <td>3.12326</td>\n",
" <td>0.000297</td>\n",
" <td>1.793330</td>\n",
" <td>0.003688</td>\n",
" <td>1.926129</td>\n",
" <td>2.675223e-14</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNC3</th>\n",
" <td>1.435230</td>\n",
" <td>0.000909</td>\n",
" <td>1.371845</td>\n",
" <td>1.568677e-06</td>\n",
" <td>2.441793</td>\n",
" <td>2.662866e-22</td>\n",
" <td>2.43875</td>\n",
" <td>0.000297</td>\n",
" <td>0.991693</td>\n",
" <td>0.003688</td>\n",
" <td>1.069948</td>\n",
" <td>9.471922e-05</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNH2</th>\n",
" <td>0.579627</td>\n",
" <td>0.008653</td>\n",
" <td>0.490217</td>\n",
" <td>2.227335e-02</td>\n",
" <td>1.013771</td>\n",
" <td>5.168378e-09</td>\n",
" <td>1.08432</td>\n",
" <td>0.000297</td>\n",
" <td>0.494435</td>\n",
" <td>0.025866</td>\n",
" <td>0.523554</td>\n",
" <td>4.206006e-02</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNK12</th>\n",
" <td>1.335300</td>\n",
" <td>0.035775</td>\n",
" <td>1.463659</td>\n",
" <td>2.169996e-02</td>\n",
" <td>3.262093</td>\n",
" <td>1.246370e-16</td>\n",
" <td>3.38070</td>\n",
" <td>0.000297</td>\n",
" <td>2.035020</td>\n",
" <td>0.003688</td>\n",
" <td>1.798434</td>\n",
" <td>1.954618e-07</td>\n",
" </tr>\n",
" <tr>\n",
" <th>MMP24</th>\n",
" <td>0.474043</td>\n",
" <td>0.048878</td>\n",
" <td>0.515980</td>\n",
" <td>1.132582e-02</td>\n",
" <td>2.435291</td>\n",
" <td>1.100123e-68</td>\n",
" <td>2.52971</td>\n",
" <td>0.000297</td>\n",
" <td>2.045560</td>\n",
" <td>0.003688</td>\n",
" <td>1.919311</td>\n",
" <td>8.883964e-48</td>\n",
" </tr>\n",
" <tr>\n",
" <th>OGDHL</th>\n",
" <td>0.695533</td>\n",
" <td>0.000909</td>\n",
" <td>0.588846</td>\n",
" <td>7.989685e-05</td>\n",
" <td>1.144678</td>\n",
" <td>6.688624e-19</td>\n",
" <td>1.20615</td>\n",
" <td>0.000297</td>\n",
" <td>0.500505</td>\n",
" <td>0.012767</td>\n",
" <td>0.555831</td>\n",
" <td>2.431304e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>PCDH10</th>\n",
" <td>0.940026</td>\n",
" <td>0.000909</td>\n",
" <td>0.901610</td>\n",
" <td>4.529861e-08</td>\n",
" <td>1.551918</td>\n",
" <td>3.237937e-24</td>\n",
" <td>1.57690</td>\n",
" <td>0.000297</td>\n",
" <td>0.625683</td>\n",
" <td>0.003688</td>\n",
" <td>0.650308</td>\n",
" <td>5.404578e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>PHF21B</th>\n",
" <td>0.956119</td>\n",
" <td>0.000909</td>\n",
" <td>0.910720</td>\n",
" <td>2.396220e-10</td>\n",
" <td>1.533464</td>\n",
" <td>1.873001e-32</td>\n",
" <td>1.62192</td>\n",
" <td>0.000297</td>\n",
" <td>0.655629</td>\n",
" <td>0.003688</td>\n",
" <td>0.622744</td>\n",
" <td>9.211815e-06</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SCAMP5</th>\n",
" <td>0.624796</td>\n",
" <td>0.000909</td>\n",
" <td>0.641946</td>\n",
" <td>2.544391e-06</td>\n",
" <td>1.522203</td>\n",
" <td>2.034301e-38</td>\n",
" <td>1.51348</td>\n",
" <td>0.000297</td>\n",
" <td>0.878038</td>\n",
" <td>0.003688</td>\n",
" <td>0.880257</td>\n",
" <td>1.326498e-13</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SCN3B</th>\n",
" <td>0.872131</td>\n",
" <td>0.000909</td>\n",
" <td>0.927798</td>\n",
" <td>2.143974e-03</td>\n",
" <td>2.218313</td>\n",
" <td>1.026760e-22</td>\n",
" <td>2.18769</td>\n",
" <td>0.000297</td>\n",
" <td>1.304940</td>\n",
" <td>0.003688</td>\n",
" <td>1.290515</td>\n",
" <td>4.203802e-09</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC16A9</th>\n",
" <td>0.499922</td>\n",
" <td>0.025529</td>\n",
" <td>0.433671</td>\n",
" <td>1.867624e-02</td>\n",
" <td>1.147731</td>\n",
" <td>3.695734e-16</td>\n",
" <td>1.11560</td>\n",
" <td>0.000297</td>\n",
" <td>0.604635</td>\n",
" <td>0.003688</td>\n",
" <td>0.714061</td>\n",
" <td>2.535538e-06</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC2A3</th>\n",
" <td>1.306540</td>\n",
" <td>0.000909</td>\n",
" <td>1.320867</td>\n",
" <td>5.702228e-19</td>\n",
" <td>1.775198</td>\n",
" <td>6.543914e-38</td>\n",
" <td>1.81367</td>\n",
" <td>0.000297</td>\n",
" <td>0.496610</td>\n",
" <td>0.010110</td>\n",
" <td>0.454331</td>\n",
" <td>8.410604e-03</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC6A17</th>\n",
" <td>0.817272</td>\n",
" <td>0.000909</td>\n",
" <td>0.611181</td>\n",
" <td>1.617834e-02</td>\n",
" <td>1.273070</td>\n",
" <td>8.440338e-11</td>\n",
" <td>1.46602</td>\n",
" <td>0.000297</td>\n",
" <td>0.637613</td>\n",
" <td>0.003688</td>\n",
" <td>0.661889</td>\n",
" <td>6.528871e-03</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SYP</th>\n",
" <td>0.528723</td>\n",
" <td>0.011246</td>\n",
" <td>0.545551</td>\n",
" <td>1.136552e-03</td>\n",
" <td>1.875860</td>\n",
" <td>1.724697e-44</td>\n",
" <td>1.88800</td>\n",
" <td>0.000297</td>\n",
" <td>1.349150</td>\n",
" <td>0.003688</td>\n",
" <td>1.330308</td>\n",
" <td>1.010528e-23</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM145</th>\n",
" <td>0.716700</td>\n",
" <td>0.002966</td>\n",
" <td>0.648081</td>\n",
" <td>2.498289e-03</td>\n",
" <td>1.958799</td>\n",
" <td>6.128832e-34</td>\n",
" <td>1.97304</td>\n",
" <td>0.000297</td>\n",
" <td>1.245750</td>\n",
" <td>0.003688</td>\n",
" <td>1.310718</td>\n",
" <td>5.504090e-17</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM179</th>\n",
" <td>1.318500</td>\n",
" <td>0.008246</td>\n",
" <td>1.227620</td>\n",
" <td>1.794627e-02</td>\n",
" <td>2.372037</td>\n",
" <td>2.433588e-10</td>\n",
" <td>2.59425</td>\n",
" <td>0.000297</td>\n",
" <td>1.264340</td>\n",
" <td>0.003688</td>\n",
" <td>1.144417</td>\n",
" <td>6.849633e-03</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM198</th>\n",
" <td>0.529671</td>\n",
" <td>0.022554</td>\n",
" <td>0.558512</td>\n",
" <td>8.561365e-03</td>\n",
" <td>1.752023</td>\n",
" <td>1.329830e-28</td>\n",
" <td>1.72965</td>\n",
" <td>0.000297</td>\n",
" <td>1.189730</td>\n",
" <td>0.003688</td>\n",
" <td>1.193511</td>\n",
" <td>1.932551e-14</td>\n",
" </tr>\n",
" <tr>\n",
" <th>VSTM2L</th>\n",
" <td>0.994718</td>\n",
" <td>0.000909</td>\n",
" <td>0.894290</td>\n",
" <td>3.940652e-03</td>\n",
" <td>2.004282</td>\n",
" <td>9.405065e-17</td>\n",
" <td>2.06225</td>\n",
" <td>0.000297</td>\n",
" <td>1.057880</td>\n",
" <td>0.003688</td>\n",
" <td>1.109992</td>\n",
" <td>1.140924e-05</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" ctrl_rnai_1pct_vs_21pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.693035 \n",
"BSN 1.112460 \n",
"CACNA1B 0.671965 \n",
"CDK5R2 0.906606 \n",
"DLGAP3 0.752587 \n",
"FBXO41 1.031050 \n",
"FNDC5 0.899575 \n",
"FSTL4 0.673053 \n",
"GABBR2 0.640786 \n",
"GPR153 0.705581 \n",
"GPRIN1 0.478252 \n",
"KCNB1 1.319140 \n",
"KCNC3 1.435230 \n",
"KCNH2 0.579627 \n",
"KCNK12 1.335300 \n",
"MMP24 0.474043 \n",
"OGDHL 0.695533 \n",
"PCDH10 0.940026 \n",
"PHF21B 0.956119 \n",
"SCAMP5 0.624796 \n",
"SCN3B 0.872131 \n",
"SLC16A9 0.499922 \n",
"SLC2A3 1.306540 \n",
"SLC6A17 0.817272 \n",
"SYP 0.528723 \n",
"TMEM145 0.716700 \n",
"TMEM179 1.318500 \n",
"TMEM198 0.529671 \n",
"VSTM2L 0.994718 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_edger_q \\\n",
"gene_id \n",
"ACSL6 0.003538 \n",
"BSN 0.000909 \n",
"CACNA1B 0.004034 \n",
"CDK5R2 0.010604 \n",
"DLGAP3 0.000909 \n",
"FBXO41 0.000909 \n",
"FNDC5 0.000909 \n",
"FSTL4 0.013110 \n",
"GABBR2 0.004546 \n",
"GPR153 0.000909 \n",
"GPRIN1 0.022322 \n",
"KCNB1 0.000909 \n",
"KCNC3 0.000909 \n",
"KCNH2 0.008653 \n",
"KCNK12 0.035775 \n",
"MMP24 0.048878 \n",
"OGDHL 0.000909 \n",
"PCDH10 0.000909 \n",
"PHF21B 0.000909 \n",
"SCAMP5 0.000909 \n",
"SCN3B 0.000909 \n",
"SLC16A9 0.025529 \n",
"SLC2A3 0.000909 \n",
"SLC6A17 0.000909 \n",
"SYP 0.011246 \n",
"TMEM145 0.002966 \n",
"TMEM179 0.008246 \n",
"TMEM198 0.022554 \n",
"VSTM2L 0.000909 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.780701 \n",
"BSN 1.099282 \n",
"CACNA1B 0.747851 \n",
"CDK5R2 0.995753 \n",
"DLGAP3 0.694043 \n",
"FBXO41 0.948953 \n",
"FNDC5 0.906137 \n",
"FSTL4 0.739232 \n",
"GABBR2 0.645720 \n",
"GPR153 0.667895 \n",
"GPRIN1 0.477798 \n",
"KCNB1 0.900296 \n",
"KCNC3 1.371845 \n",
"KCNH2 0.490217 \n",
"KCNK12 1.463659 \n",
"MMP24 0.515980 \n",
"OGDHL 0.588846 \n",
"PCDH10 0.901610 \n",
"PHF21B 0.910720 \n",
"SCAMP5 0.641946 \n",
"SCN3B 0.927798 \n",
"SLC16A9 0.433671 \n",
"SLC2A3 1.320867 \n",
"SLC6A17 0.611181 \n",
"SYP 0.545551 \n",
"TMEM145 0.648081 \n",
"TMEM179 1.227620 \n",
"TMEM198 0.558512 \n",
"VSTM2L 0.894290 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_cuffdiff_q \\\n",
"gene_id \n",
"ACSL6 7.263680e-04 \n",
"BSN 2.182676e-04 \n",
"CACNA1B 2.959385e-03 \n",
"CDK5R2 3.212454e-02 \n",
"DLGAP3 9.614567e-03 \n",
"FBXO41 5.459367e-09 \n",
"FNDC5 5.380895e-05 \n",
"FSTL4 3.237984e-02 \n",
"GABBR2 3.119686e-03 \n",
"GPR153 3.105876e-05 \n",
"GPRIN1 5.594201e-04 \n",
"KCNB1 4.169021e-02 \n",
"KCNC3 1.568677e-06 \n",
"KCNH2 2.227335e-02 \n",
"KCNK12 2.169996e-02 \n",
"MMP24 1.132582e-02 \n",
"OGDHL 7.989685e-05 \n",
"PCDH10 4.529861e-08 \n",
"PHF21B 2.396220e-10 \n",
"SCAMP5 2.544391e-06 \n",
"SCN3B 2.143974e-03 \n",
"SLC16A9 1.867624e-02 \n",
"SLC2A3 5.702228e-19 \n",
"SLC6A17 1.617834e-02 \n",
"SYP 1.136552e-03 \n",
"TMEM145 2.498289e-03 \n",
"TMEM179 1.794627e-02 \n",
"TMEM198 8.561365e-03 \n",
"VSTM2L 3.940652e-03 \n",
"\n",
" rest_rnai_1pct_vs_21pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 1.401302 \n",
"BSN 2.630058 \n",
"CACNA1B 2.788085 \n",
"CDK5R2 2.747189 \n",
"DLGAP3 2.155980 \n",
"FBXO41 1.587736 \n",
"FNDC5 1.722907 \n",
"FSTL4 1.900756 \n",
"GABBR2 1.406621 \n",
"GPR153 1.254204 \n",
"GPRIN1 1.239415 \n",
"KCNB1 2.826425 \n",
"KCNC3 2.441793 \n",
"KCNH2 1.013771 \n",
"KCNK12 3.262093 \n",
"MMP24 2.435291 \n",
"OGDHL 1.144678 \n",
"PCDH10 1.551918 \n",
"PHF21B 1.533464 \n",
"SCAMP5 1.522203 \n",
"SCN3B 2.218313 \n",
"SLC16A9 1.147731 \n",
"SLC2A3 1.775198 \n",
"SLC6A17 1.273070 \n",
"SYP 1.875860 \n",
"TMEM145 1.958799 \n",
"TMEM179 2.372037 \n",
"TMEM198 1.752023 \n",
"VSTM2L 2.004282 \n",
"\n",
" rest_rnai_1pct_vs_21pct_edger_q \\\n",
"gene_id \n",
"ACSL6 2.032425e-12 \n",
"BSN 2.177764e-23 \n",
"CACNA1B 8.261890e-59 \n",
"CDK5R2 1.457558e-22 \n",
"DLGAP3 2.843907e-30 \n",
"FBXO41 1.200640e-26 \n",
"FNDC5 8.803560e-22 \n",
"FSTL4 6.090909e-16 \n",
"GABBR2 4.255258e-15 \n",
"GPR153 9.336971e-20 \n",
"GPRIN1 2.815636e-26 \n",
"KCNB1 7.985477e-25 \n",
"KCNC3 2.662866e-22 \n",
"KCNH2 5.168378e-09 \n",
"KCNK12 1.246370e-16 \n",
"MMP24 1.100123e-68 \n",
"OGDHL 6.688624e-19 \n",
"PCDH10 3.237937e-24 \n",
"PHF21B 1.873001e-32 \n",
"SCAMP5 2.034301e-38 \n",
"SCN3B 1.026760e-22 \n",
"SLC16A9 3.695734e-16 \n",
"SLC2A3 6.543914e-38 \n",
"SLC6A17 8.440338e-11 \n",
"SYP 1.724697e-44 \n",
"TMEM145 6.128832e-34 \n",
"TMEM179 2.433588e-10 \n",
"TMEM198 1.329830e-28 \n",
"VSTM2L 9.405065e-17 \n",
"\n",
" rest_rnai_1pct_vs_21pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 1.35732 \n",
"BSN 2.63468 \n",
"CACNA1B 2.87760 \n",
"CDK5R2 2.69818 \n",
"DLGAP3 2.09444 \n",
"FBXO41 1.63260 \n",
"FNDC5 1.69674 \n",
"FSTL4 1.88138 \n",
"GABBR2 1.34725 \n",
"GPR153 1.18264 \n",
"GPRIN1 1.21924 \n",
"KCNB1 3.12326 \n",
"KCNC3 2.43875 \n",
"KCNH2 1.08432 \n",
"KCNK12 3.38070 \n",
"MMP24 2.52971 \n",
"OGDHL 1.20615 \n",
"PCDH10 1.57690 \n",
"PHF21B 1.62192 \n",
"SCAMP5 1.51348 \n",
"SCN3B 2.18769 \n",
"SLC16A9 1.11560 \n",
"SLC2A3 1.81367 \n",
"SLC6A17 1.46602 \n",
"SYP 1.88800 \n",
"TMEM145 1.97304 \n",
"TMEM179 2.59425 \n",
"TMEM198 1.72965 \n",
"VSTM2L 2.06225 \n",
"\n",
" rest_rnai_1pct_vs_21pct_cuffdiff_q \\\n",
"gene_id \n",
"ACSL6 0.000297 \n",
"BSN 0.000297 \n",
"CACNA1B 0.000297 \n",
"CDK5R2 0.000297 \n",
"DLGAP3 0.000297 \n",
"FBXO41 0.000297 \n",
"FNDC5 0.000297 \n",
"FSTL4 0.000297 \n",
"GABBR2 0.000297 \n",
"GPR153 0.000297 \n",
"GPRIN1 0.000297 \n",
"KCNB1 0.000297 \n",
"KCNC3 0.000297 \n",
"KCNH2 0.000297 \n",
"KCNK12 0.000297 \n",
"MMP24 0.000297 \n",
"OGDHL 0.000297 \n",
"PCDH10 0.000297 \n",
"PHF21B 0.000297 \n",
"SCAMP5 0.000297 \n",
"SCN3B 0.000297 \n",
"SLC16A9 0.000297 \n",
"SLC2A3 0.000297 \n",
"SLC6A17 0.000297 \n",
"SYP 0.000297 \n",
"TMEM145 0.000297 \n",
"TMEM179 0.000297 \n",
"TMEM198 0.000297 \n",
"VSTM2L 0.000297 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.652839 \n",
"BSN 1.510280 \n",
"CACNA1B 2.194900 \n",
"CDK5R2 1.781610 \n",
"DLGAP3 1.332100 \n",
"FBXO41 0.590333 \n",
"FNDC5 0.786390 \n",
"FSTL4 1.196870 \n",
"GABBR2 0.695420 \n",
"GPR153 0.466654 \n",
"GPRIN1 0.730595 \n",
"KCNB1 1.793330 \n",
"KCNC3 0.991693 \n",
"KCNH2 0.494435 \n",
"KCNK12 2.035020 \n",
"MMP24 2.045560 \n",
"OGDHL 0.500505 \n",
"PCDH10 0.625683 \n",
"PHF21B 0.655629 \n",
"SCAMP5 0.878038 \n",
"SCN3B 1.304940 \n",
"SLC16A9 0.604635 \n",
"SLC2A3 0.496610 \n",
"SLC6A17 0.637613 \n",
"SYP 1.349150 \n",
"TMEM145 1.245750 \n",
"TMEM179 1.264340 \n",
"TMEM198 1.189730 \n",
"VSTM2L 1.057880 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_edger_q \\\n",
"gene_id \n",
"ACSL6 0.003688 \n",
"BSN 0.003688 \n",
"CACNA1B 0.003688 \n",
"CDK5R2 0.003688 \n",
"DLGAP3 0.003688 \n",
"FBXO41 0.003688 \n",
"FNDC5 0.003688 \n",
"FSTL4 0.003688 \n",
"GABBR2 0.003688 \n",
"GPR153 0.029808 \n",
"GPRIN1 0.003688 \n",
"KCNB1 0.003688 \n",
"KCNC3 0.003688 \n",
"KCNH2 0.025866 \n",
"KCNK12 0.003688 \n",
"MMP24 0.003688 \n",
"OGDHL 0.012767 \n",
"PCDH10 0.003688 \n",
"PHF21B 0.003688 \n",
"SCAMP5 0.003688 \n",
"SCN3B 0.003688 \n",
"SLC16A9 0.003688 \n",
"SLC2A3 0.010110 \n",
"SLC6A17 0.003688 \n",
"SYP 0.003688 \n",
"TMEM145 0.003688 \n",
"TMEM179 0.003688 \n",
"TMEM198 0.003688 \n",
"VSTM2L 0.003688 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.620602 \n",
"BSN 1.530775 \n",
"CACNA1B 2.040234 \n",
"CDK5R2 1.751436 \n",
"DLGAP3 1.461937 \n",
"FBXO41 0.638783 \n",
"FNDC5 0.816770 \n",
"FSTL4 1.161524 \n",
"GABBR2 0.760901 \n",
"GPR153 0.586308 \n",
"GPRIN1 0.761617 \n",
"KCNB1 1.926129 \n",
"KCNC3 1.069948 \n",
"KCNH2 0.523554 \n",
"KCNK12 1.798434 \n",
"MMP24 1.919311 \n",
"OGDHL 0.555831 \n",
"PCDH10 0.650308 \n",
"PHF21B 0.622744 \n",
"SCAMP5 0.880257 \n",
"SCN3B 1.290515 \n",
"SLC16A9 0.714061 \n",
"SLC2A3 0.454331 \n",
"SLC6A17 0.661889 \n",
"SYP 1.330308 \n",
"TMEM145 1.310718 \n",
"TMEM179 1.144417 \n",
"TMEM198 1.193511 \n",
"VSTM2L 1.109992 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_q \n",
"gene_id \n",
"ACSL6 3.199196e-02 \n",
"BSN 2.831440e-08 \n",
"CACNA1B 2.517821e-37 \n",
"CDK5R2 3.841797e-12 \n",
"DLGAP3 4.783860e-16 \n",
"FBXO41 2.413352e-04 \n",
"FNDC5 7.937957e-06 \n",
"FSTL4 6.264628e-07 \n",
"GABBR2 2.351245e-04 \n",
"GPR153 2.421624e-04 \n",
"GPRIN1 6.955227e-10 \n",
"KCNB1 2.675223e-14 \n",
"KCNC3 9.471922e-05 \n",
"KCNH2 4.206006e-02 \n",
"KCNK12 1.954618e-07 \n",
"MMP24 8.883964e-48 \n",
"OGDHL 2.431304e-04 \n",
"PCDH10 5.404578e-04 \n",
"PHF21B 9.211815e-06 \n",
"SCAMP5 1.326498e-13 \n",
"SCN3B 4.203802e-09 \n",
"SLC16A9 2.535538e-06 \n",
"SLC2A3 8.410604e-03 \n",
"SLC6A17 6.528871e-03 \n",
"SYP 1.010528e-23 \n",
"TMEM145 5.504090e-17 \n",
"TMEM179 6.849633e-03 \n",
"TMEM198 1.932551e-14 \n",
"VSTM2L 1.140924e-05 "
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"cavadas_et_al_results"
]
},
{
"cell_type": "code",
"execution_count": 5,
"id": "0ac7a4aa",
"metadata": {},
"outputs": [],
"source": [
"# There should be 29 genes in this file\n",
"assert len(cavadas_et_al_results) == 29"
]
},
{
"cell_type": "code",
"execution_count": 6,
"id": "a2bbea05",
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
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" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_edger_log2_fc</th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_edger_q</th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_cuffdiff_log2_fc</th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_cuffdiff_q</th>\n",
" <th>rest_rnai_1pct_vs_21pct_edger_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_21pct_edger_q</th>\n",
" <th>rest_rnai_1pct_vs_21pct_cuffdiff_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_21pct_cuffdiff_q</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_edger_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_edger_q</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_q</th>\n",
" </tr>\n",
" <tr>\n",
" <th>gene_id</th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>ACSL6</th>\n",
" <td>0.693035</td>\n",
" <td>0.003538</td>\n",
" <td>0.780701</td>\n",
" <td>7.263680e-04</td>\n",
" <td>1.401302</td>\n",
" <td>2.032425e-12</td>\n",
" <td>1.35732</td>\n",
" <td>0.000297</td>\n",
" <td>0.652839</td>\n",
" <td>0.003688</td>\n",
" <td>0.620602</td>\n",
" <td>3.199196e-02</td>\n",
" </tr>\n",
" <tr>\n",
" <th>BSN</th>\n",
" <td>1.112460</td>\n",
" <td>0.000909</td>\n",
" <td>1.099282</td>\n",
" <td>2.182676e-04</td>\n",
" <td>2.630058</td>\n",
" <td>2.177764e-23</td>\n",
" <td>2.63468</td>\n",
" <td>0.000297</td>\n",
" <td>1.510280</td>\n",
" <td>0.003688</td>\n",
" <td>1.530775</td>\n",
" <td>2.831440e-08</td>\n",
" </tr>\n",
" <tr>\n",
" <th>CACNA1B</th>\n",
" <td>0.671965</td>\n",
" <td>0.004034</td>\n",
" <td>0.747851</td>\n",
" <td>2.959385e-03</td>\n",
" <td>2.788085</td>\n",
" <td>8.261890e-59</td>\n",
" <td>2.87760</td>\n",
" <td>0.000297</td>\n",
" <td>2.194900</td>\n",
" <td>0.003688</td>\n",
" <td>2.040234</td>\n",
" <td>2.517821e-37</td>\n",
" </tr>\n",
" <tr>\n",
" <th>CDK5R2</th>\n",
" <td>0.906606</td>\n",
" <td>0.010604</td>\n",
" <td>0.995753</td>\n",
" <td>3.212454e-02</td>\n",
" <td>2.747189</td>\n",
" <td>1.457558e-22</td>\n",
" <td>2.69818</td>\n",
" <td>0.000297</td>\n",
" <td>1.781610</td>\n",
" <td>0.003688</td>\n",
" <td>1.751436</td>\n",
" <td>3.841797e-12</td>\n",
" </tr>\n",
" <tr>\n",
" <th>DLGAP3</th>\n",
" <td>0.752587</td>\n",
" <td>0.000909</td>\n",
" <td>0.694043</td>\n",
" <td>9.614567e-03</td>\n",
" <td>2.155980</td>\n",
" <td>2.843907e-30</td>\n",
" <td>2.09444</td>\n",
" <td>0.000297</td>\n",
" <td>1.332100</td>\n",
" <td>0.003688</td>\n",
" <td>1.461937</td>\n",
" <td>4.783860e-16</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FBXO41</th>\n",
" <td>1.031050</td>\n",
" <td>0.000909</td>\n",
" <td>0.948953</td>\n",
" <td>5.459367e-09</td>\n",
" <td>1.587736</td>\n",
" <td>1.200640e-26</td>\n",
" <td>1.63260</td>\n",
" <td>0.000297</td>\n",
" <td>0.590333</td>\n",
" <td>0.003688</td>\n",
" <td>0.638783</td>\n",
" <td>2.413352e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FNDC5</th>\n",
" <td>0.899575</td>\n",
" <td>0.000909</td>\n",
" <td>0.906137</td>\n",
" <td>5.380895e-05</td>\n",
" <td>1.722907</td>\n",
" <td>8.803560e-22</td>\n",
" <td>1.69674</td>\n",
" <td>0.000297</td>\n",
" <td>0.786390</td>\n",
" <td>0.003688</td>\n",
" <td>0.816770</td>\n",
" <td>7.937957e-06</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FSTL4</th>\n",
" <td>0.673053</td>\n",
" <td>0.013110</td>\n",
" <td>0.739232</td>\n",
" <td>3.237984e-02</td>\n",
" <td>1.900756</td>\n",
" <td>6.090909e-16</td>\n",
" <td>1.88138</td>\n",
" <td>0.000297</td>\n",
" <td>1.196870</td>\n",
" <td>0.003688</td>\n",
" <td>1.161524</td>\n",
" <td>6.264628e-07</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GABBR2</th>\n",
" <td>0.640786</td>\n",
" <td>0.004546</td>\n",
" <td>0.645720</td>\n",
" <td>3.119686e-03</td>\n",
" <td>1.406621</td>\n",
" <td>4.255258e-15</td>\n",
" <td>1.34725</td>\n",
" <td>0.000297</td>\n",
" <td>0.695420</td>\n",
" <td>0.003688</td>\n",
" <td>0.760901</td>\n",
" <td>2.351245e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GPR153</th>\n",
" <td>0.705581</td>\n",
" <td>0.000909</td>\n",
" <td>0.667895</td>\n",
" <td>3.105876e-05</td>\n",
" <td>1.254204</td>\n",
" <td>9.336971e-20</td>\n",
" <td>1.18264</td>\n",
" <td>0.000297</td>\n",
" <td>0.466654</td>\n",
" <td>0.029808</td>\n",
" <td>0.586308</td>\n",
" <td>2.421624e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GPRIN1</th>\n",
" <td>0.478252</td>\n",
" <td>0.022322</td>\n",
" <td>0.477798</td>\n",
" <td>5.594201e-04</td>\n",
" <td>1.239415</td>\n",
" <td>2.815636e-26</td>\n",
" <td>1.21924</td>\n",
" <td>0.000297</td>\n",
" <td>0.730595</td>\n",
" <td>0.003688</td>\n",
" <td>0.761617</td>\n",
" <td>6.955227e-10</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNB1</th>\n",
" <td>1.319140</td>\n",
" <td>0.000909</td>\n",
" <td>0.900296</td>\n",
" <td>4.169021e-02</td>\n",
" <td>2.826425</td>\n",
" <td>7.985477e-25</td>\n",
" <td>3.12326</td>\n",
" <td>0.000297</td>\n",
" <td>1.793330</td>\n",
" <td>0.003688</td>\n",
" <td>1.926129</td>\n",
" <td>2.675223e-14</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNC3</th>\n",
" <td>1.435230</td>\n",
" <td>0.000909</td>\n",
" <td>1.371845</td>\n",
" <td>1.568677e-06</td>\n",
" <td>2.441793</td>\n",
" <td>2.662866e-22</td>\n",
" <td>2.43875</td>\n",
" <td>0.000297</td>\n",
" <td>0.991693</td>\n",
" <td>0.003688</td>\n",
" <td>1.069948</td>\n",
" <td>9.471922e-05</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNH2</th>\n",
" <td>0.579627</td>\n",
" <td>0.008653</td>\n",
" <td>0.490217</td>\n",
" <td>2.227335e-02</td>\n",
" <td>1.013771</td>\n",
" <td>5.168378e-09</td>\n",
" <td>1.08432</td>\n",
" <td>0.000297</td>\n",
" <td>0.494435</td>\n",
" <td>0.025866</td>\n",
" <td>0.523554</td>\n",
" <td>4.206006e-02</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNK12</th>\n",
" <td>1.335300</td>\n",
" <td>0.035775</td>\n",
" <td>1.463659</td>\n",
" <td>2.169996e-02</td>\n",
" <td>3.262093</td>\n",
" <td>1.246370e-16</td>\n",
" <td>3.38070</td>\n",
" <td>0.000297</td>\n",
" <td>2.035020</td>\n",
" <td>0.003688</td>\n",
" <td>1.798434</td>\n",
" <td>1.954618e-07</td>\n",
" </tr>\n",
" <tr>\n",
" <th>MMP24</th>\n",
" <td>0.474043</td>\n",
" <td>0.048878</td>\n",
" <td>0.515980</td>\n",
" <td>1.132582e-02</td>\n",
" <td>2.435291</td>\n",
" <td>1.100123e-68</td>\n",
" <td>2.52971</td>\n",
" <td>0.000297</td>\n",
" <td>2.045560</td>\n",
" <td>0.003688</td>\n",
" <td>1.919311</td>\n",
" <td>8.883964e-48</td>\n",
" </tr>\n",
" <tr>\n",
" <th>OGDHL</th>\n",
" <td>0.695533</td>\n",
" <td>0.000909</td>\n",
" <td>0.588846</td>\n",
" <td>7.989685e-05</td>\n",
" <td>1.144678</td>\n",
" <td>6.688624e-19</td>\n",
" <td>1.20615</td>\n",
" <td>0.000297</td>\n",
" <td>0.500505</td>\n",
" <td>0.012767</td>\n",
" <td>0.555831</td>\n",
" <td>2.431304e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>PCDH10</th>\n",
" <td>0.940026</td>\n",
" <td>0.000909</td>\n",
" <td>0.901610</td>\n",
" <td>4.529861e-08</td>\n",
" <td>1.551918</td>\n",
" <td>3.237937e-24</td>\n",
" <td>1.57690</td>\n",
" <td>0.000297</td>\n",
" <td>0.625683</td>\n",
" <td>0.003688</td>\n",
" <td>0.650308</td>\n",
" <td>5.404578e-04</td>\n",
" </tr>\n",
" <tr>\n",
" <th>PHF21B</th>\n",
" <td>0.956119</td>\n",
" <td>0.000909</td>\n",
" <td>0.910720</td>\n",
" <td>2.396220e-10</td>\n",
" <td>1.533464</td>\n",
" <td>1.873001e-32</td>\n",
" <td>1.62192</td>\n",
" <td>0.000297</td>\n",
" <td>0.655629</td>\n",
" <td>0.003688</td>\n",
" <td>0.622744</td>\n",
" <td>9.211815e-06</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SCAMP5</th>\n",
" <td>0.624796</td>\n",
" <td>0.000909</td>\n",
" <td>0.641946</td>\n",
" <td>2.544391e-06</td>\n",
" <td>1.522203</td>\n",
" <td>2.034301e-38</td>\n",
" <td>1.51348</td>\n",
" <td>0.000297</td>\n",
" <td>0.878038</td>\n",
" <td>0.003688</td>\n",
" <td>0.880257</td>\n",
" <td>1.326498e-13</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SCN3B</th>\n",
" <td>0.872131</td>\n",
" <td>0.000909</td>\n",
" <td>0.927798</td>\n",
" <td>2.143974e-03</td>\n",
" <td>2.218313</td>\n",
" <td>1.026760e-22</td>\n",
" <td>2.18769</td>\n",
" <td>0.000297</td>\n",
" <td>1.304940</td>\n",
" <td>0.003688</td>\n",
" <td>1.290515</td>\n",
" <td>4.203802e-09</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC16A9</th>\n",
" <td>0.499922</td>\n",
" <td>0.025529</td>\n",
" <td>0.433671</td>\n",
" <td>1.867624e-02</td>\n",
" <td>1.147731</td>\n",
" <td>3.695734e-16</td>\n",
" <td>1.11560</td>\n",
" <td>0.000297</td>\n",
" <td>0.604635</td>\n",
" <td>0.003688</td>\n",
" <td>0.714061</td>\n",
" <td>2.535538e-06</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC2A3</th>\n",
" <td>1.306540</td>\n",
" <td>0.000909</td>\n",
" <td>1.320867</td>\n",
" <td>5.702228e-19</td>\n",
" <td>1.775198</td>\n",
" <td>6.543914e-38</td>\n",
" <td>1.81367</td>\n",
" <td>0.000297</td>\n",
" <td>0.496610</td>\n",
" <td>0.010110</td>\n",
" <td>0.454331</td>\n",
" <td>8.410604e-03</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC6A17</th>\n",
" <td>0.817272</td>\n",
" <td>0.000909</td>\n",
" <td>0.611181</td>\n",
" <td>1.617834e-02</td>\n",
" <td>1.273070</td>\n",
" <td>8.440338e-11</td>\n",
" <td>1.46602</td>\n",
" <td>0.000297</td>\n",
" <td>0.637613</td>\n",
" <td>0.003688</td>\n",
" <td>0.661889</td>\n",
" <td>6.528871e-03</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SYP</th>\n",
" <td>0.528723</td>\n",
" <td>0.011246</td>\n",
" <td>0.545551</td>\n",
" <td>1.136552e-03</td>\n",
" <td>1.875860</td>\n",
" <td>1.724697e-44</td>\n",
" <td>1.88800</td>\n",
" <td>0.000297</td>\n",
" <td>1.349150</td>\n",
" <td>0.003688</td>\n",
" <td>1.330308</td>\n",
" <td>1.010528e-23</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM145</th>\n",
" <td>0.716700</td>\n",
" <td>0.002966</td>\n",
" <td>0.648081</td>\n",
" <td>2.498289e-03</td>\n",
" <td>1.958799</td>\n",
" <td>6.128832e-34</td>\n",
" <td>1.97304</td>\n",
" <td>0.000297</td>\n",
" <td>1.245750</td>\n",
" <td>0.003688</td>\n",
" <td>1.310718</td>\n",
" <td>5.504090e-17</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM179</th>\n",
" <td>1.318500</td>\n",
" <td>0.008246</td>\n",
" <td>1.227620</td>\n",
" <td>1.794627e-02</td>\n",
" <td>2.372037</td>\n",
" <td>2.433588e-10</td>\n",
" <td>2.59425</td>\n",
" <td>0.000297</td>\n",
" <td>1.264340</td>\n",
" <td>0.003688</td>\n",
" <td>1.144417</td>\n",
" <td>6.849633e-03</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM198</th>\n",
" <td>0.529671</td>\n",
" <td>0.022554</td>\n",
" <td>0.558512</td>\n",
" <td>8.561365e-03</td>\n",
" <td>1.752023</td>\n",
" <td>1.329830e-28</td>\n",
" <td>1.72965</td>\n",
" <td>0.000297</td>\n",
" <td>1.189730</td>\n",
" <td>0.003688</td>\n",
" <td>1.193511</td>\n",
" <td>1.932551e-14</td>\n",
" </tr>\n",
" <tr>\n",
" <th>VSTM2L</th>\n",
" <td>0.994718</td>\n",
" <td>0.000909</td>\n",
" <td>0.894290</td>\n",
" <td>3.940652e-03</td>\n",
" <td>2.004282</td>\n",
" <td>9.405065e-17</td>\n",
" <td>2.06225</td>\n",
" <td>0.000297</td>\n",
" <td>1.057880</td>\n",
" <td>0.003688</td>\n",
" <td>1.109992</td>\n",
" <td>1.140924e-05</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" ctrl_rnai_1pct_vs_21pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.693035 \n",
"BSN 1.112460 \n",
"CACNA1B 0.671965 \n",
"CDK5R2 0.906606 \n",
"DLGAP3 0.752587 \n",
"FBXO41 1.031050 \n",
"FNDC5 0.899575 \n",
"FSTL4 0.673053 \n",
"GABBR2 0.640786 \n",
"GPR153 0.705581 \n",
"GPRIN1 0.478252 \n",
"KCNB1 1.319140 \n",
"KCNC3 1.435230 \n",
"KCNH2 0.579627 \n",
"KCNK12 1.335300 \n",
"MMP24 0.474043 \n",
"OGDHL 0.695533 \n",
"PCDH10 0.940026 \n",
"PHF21B 0.956119 \n",
"SCAMP5 0.624796 \n",
"SCN3B 0.872131 \n",
"SLC16A9 0.499922 \n",
"SLC2A3 1.306540 \n",
"SLC6A17 0.817272 \n",
"SYP 0.528723 \n",
"TMEM145 0.716700 \n",
"TMEM179 1.318500 \n",
"TMEM198 0.529671 \n",
"VSTM2L 0.994718 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_edger_q \\\n",
"gene_id \n",
"ACSL6 0.003538 \n",
"BSN 0.000909 \n",
"CACNA1B 0.004034 \n",
"CDK5R2 0.010604 \n",
"DLGAP3 0.000909 \n",
"FBXO41 0.000909 \n",
"FNDC5 0.000909 \n",
"FSTL4 0.013110 \n",
"GABBR2 0.004546 \n",
"GPR153 0.000909 \n",
"GPRIN1 0.022322 \n",
"KCNB1 0.000909 \n",
"KCNC3 0.000909 \n",
"KCNH2 0.008653 \n",
"KCNK12 0.035775 \n",
"MMP24 0.048878 \n",
"OGDHL 0.000909 \n",
"PCDH10 0.000909 \n",
"PHF21B 0.000909 \n",
"SCAMP5 0.000909 \n",
"SCN3B 0.000909 \n",
"SLC16A9 0.025529 \n",
"SLC2A3 0.000909 \n",
"SLC6A17 0.000909 \n",
"SYP 0.011246 \n",
"TMEM145 0.002966 \n",
"TMEM179 0.008246 \n",
"TMEM198 0.022554 \n",
"VSTM2L 0.000909 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.780701 \n",
"BSN 1.099282 \n",
"CACNA1B 0.747851 \n",
"CDK5R2 0.995753 \n",
"DLGAP3 0.694043 \n",
"FBXO41 0.948953 \n",
"FNDC5 0.906137 \n",
"FSTL4 0.739232 \n",
"GABBR2 0.645720 \n",
"GPR153 0.667895 \n",
"GPRIN1 0.477798 \n",
"KCNB1 0.900296 \n",
"KCNC3 1.371845 \n",
"KCNH2 0.490217 \n",
"KCNK12 1.463659 \n",
"MMP24 0.515980 \n",
"OGDHL 0.588846 \n",
"PCDH10 0.901610 \n",
"PHF21B 0.910720 \n",
"SCAMP5 0.641946 \n",
"SCN3B 0.927798 \n",
"SLC16A9 0.433671 \n",
"SLC2A3 1.320867 \n",
"SLC6A17 0.611181 \n",
"SYP 0.545551 \n",
"TMEM145 0.648081 \n",
"TMEM179 1.227620 \n",
"TMEM198 0.558512 \n",
"VSTM2L 0.894290 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_cuffdiff_q \\\n",
"gene_id \n",
"ACSL6 7.263680e-04 \n",
"BSN 2.182676e-04 \n",
"CACNA1B 2.959385e-03 \n",
"CDK5R2 3.212454e-02 \n",
"DLGAP3 9.614567e-03 \n",
"FBXO41 5.459367e-09 \n",
"FNDC5 5.380895e-05 \n",
"FSTL4 3.237984e-02 \n",
"GABBR2 3.119686e-03 \n",
"GPR153 3.105876e-05 \n",
"GPRIN1 5.594201e-04 \n",
"KCNB1 4.169021e-02 \n",
"KCNC3 1.568677e-06 \n",
"KCNH2 2.227335e-02 \n",
"KCNK12 2.169996e-02 \n",
"MMP24 1.132582e-02 \n",
"OGDHL 7.989685e-05 \n",
"PCDH10 4.529861e-08 \n",
"PHF21B 2.396220e-10 \n",
"SCAMP5 2.544391e-06 \n",
"SCN3B 2.143974e-03 \n",
"SLC16A9 1.867624e-02 \n",
"SLC2A3 5.702228e-19 \n",
"SLC6A17 1.617834e-02 \n",
"SYP 1.136552e-03 \n",
"TMEM145 2.498289e-03 \n",
"TMEM179 1.794627e-02 \n",
"TMEM198 8.561365e-03 \n",
"VSTM2L 3.940652e-03 \n",
"\n",
" rest_rnai_1pct_vs_21pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 1.401302 \n",
"BSN 2.630058 \n",
"CACNA1B 2.788085 \n",
"CDK5R2 2.747189 \n",
"DLGAP3 2.155980 \n",
"FBXO41 1.587736 \n",
"FNDC5 1.722907 \n",
"FSTL4 1.900756 \n",
"GABBR2 1.406621 \n",
"GPR153 1.254204 \n",
"GPRIN1 1.239415 \n",
"KCNB1 2.826425 \n",
"KCNC3 2.441793 \n",
"KCNH2 1.013771 \n",
"KCNK12 3.262093 \n",
"MMP24 2.435291 \n",
"OGDHL 1.144678 \n",
"PCDH10 1.551918 \n",
"PHF21B 1.533464 \n",
"SCAMP5 1.522203 \n",
"SCN3B 2.218313 \n",
"SLC16A9 1.147731 \n",
"SLC2A3 1.775198 \n",
"SLC6A17 1.273070 \n",
"SYP 1.875860 \n",
"TMEM145 1.958799 \n",
"TMEM179 2.372037 \n",
"TMEM198 1.752023 \n",
"VSTM2L 2.004282 \n",
"\n",
" rest_rnai_1pct_vs_21pct_edger_q \\\n",
"gene_id \n",
"ACSL6 2.032425e-12 \n",
"BSN 2.177764e-23 \n",
"CACNA1B 8.261890e-59 \n",
"CDK5R2 1.457558e-22 \n",
"DLGAP3 2.843907e-30 \n",
"FBXO41 1.200640e-26 \n",
"FNDC5 8.803560e-22 \n",
"FSTL4 6.090909e-16 \n",
"GABBR2 4.255258e-15 \n",
"GPR153 9.336971e-20 \n",
"GPRIN1 2.815636e-26 \n",
"KCNB1 7.985477e-25 \n",
"KCNC3 2.662866e-22 \n",
"KCNH2 5.168378e-09 \n",
"KCNK12 1.246370e-16 \n",
"MMP24 1.100123e-68 \n",
"OGDHL 6.688624e-19 \n",
"PCDH10 3.237937e-24 \n",
"PHF21B 1.873001e-32 \n",
"SCAMP5 2.034301e-38 \n",
"SCN3B 1.026760e-22 \n",
"SLC16A9 3.695734e-16 \n",
"SLC2A3 6.543914e-38 \n",
"SLC6A17 8.440338e-11 \n",
"SYP 1.724697e-44 \n",
"TMEM145 6.128832e-34 \n",
"TMEM179 2.433588e-10 \n",
"TMEM198 1.329830e-28 \n",
"VSTM2L 9.405065e-17 \n",
"\n",
" rest_rnai_1pct_vs_21pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 1.35732 \n",
"BSN 2.63468 \n",
"CACNA1B 2.87760 \n",
"CDK5R2 2.69818 \n",
"DLGAP3 2.09444 \n",
"FBXO41 1.63260 \n",
"FNDC5 1.69674 \n",
"FSTL4 1.88138 \n",
"GABBR2 1.34725 \n",
"GPR153 1.18264 \n",
"GPRIN1 1.21924 \n",
"KCNB1 3.12326 \n",
"KCNC3 2.43875 \n",
"KCNH2 1.08432 \n",
"KCNK12 3.38070 \n",
"MMP24 2.52971 \n",
"OGDHL 1.20615 \n",
"PCDH10 1.57690 \n",
"PHF21B 1.62192 \n",
"SCAMP5 1.51348 \n",
"SCN3B 2.18769 \n",
"SLC16A9 1.11560 \n",
"SLC2A3 1.81367 \n",
"SLC6A17 1.46602 \n",
"SYP 1.88800 \n",
"TMEM145 1.97304 \n",
"TMEM179 2.59425 \n",
"TMEM198 1.72965 \n",
"VSTM2L 2.06225 \n",
"\n",
" rest_rnai_1pct_vs_21pct_cuffdiff_q \\\n",
"gene_id \n",
"ACSL6 0.000297 \n",
"BSN 0.000297 \n",
"CACNA1B 0.000297 \n",
"CDK5R2 0.000297 \n",
"DLGAP3 0.000297 \n",
"FBXO41 0.000297 \n",
"FNDC5 0.000297 \n",
"FSTL4 0.000297 \n",
"GABBR2 0.000297 \n",
"GPR153 0.000297 \n",
"GPRIN1 0.000297 \n",
"KCNB1 0.000297 \n",
"KCNC3 0.000297 \n",
"KCNH2 0.000297 \n",
"KCNK12 0.000297 \n",
"MMP24 0.000297 \n",
"OGDHL 0.000297 \n",
"PCDH10 0.000297 \n",
"PHF21B 0.000297 \n",
"SCAMP5 0.000297 \n",
"SCN3B 0.000297 \n",
"SLC16A9 0.000297 \n",
"SLC2A3 0.000297 \n",
"SLC6A17 0.000297 \n",
"SYP 0.000297 \n",
"TMEM145 0.000297 \n",
"TMEM179 0.000297 \n",
"TMEM198 0.000297 \n",
"VSTM2L 0.000297 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.652839 \n",
"BSN 1.510280 \n",
"CACNA1B 2.194900 \n",
"CDK5R2 1.781610 \n",
"DLGAP3 1.332100 \n",
"FBXO41 0.590333 \n",
"FNDC5 0.786390 \n",
"FSTL4 1.196870 \n",
"GABBR2 0.695420 \n",
"GPR153 0.466654 \n",
"GPRIN1 0.730595 \n",
"KCNB1 1.793330 \n",
"KCNC3 0.991693 \n",
"KCNH2 0.494435 \n",
"KCNK12 2.035020 \n",
"MMP24 2.045560 \n",
"OGDHL 0.500505 \n",
"PCDH10 0.625683 \n",
"PHF21B 0.655629 \n",
"SCAMP5 0.878038 \n",
"SCN3B 1.304940 \n",
"SLC16A9 0.604635 \n",
"SLC2A3 0.496610 \n",
"SLC6A17 0.637613 \n",
"SYP 1.349150 \n",
"TMEM145 1.245750 \n",
"TMEM179 1.264340 \n",
"TMEM198 1.189730 \n",
"VSTM2L 1.057880 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_edger_q \\\n",
"gene_id \n",
"ACSL6 0.003688 \n",
"BSN 0.003688 \n",
"CACNA1B 0.003688 \n",
"CDK5R2 0.003688 \n",
"DLGAP3 0.003688 \n",
"FBXO41 0.003688 \n",
"FNDC5 0.003688 \n",
"FSTL4 0.003688 \n",
"GABBR2 0.003688 \n",
"GPR153 0.029808 \n",
"GPRIN1 0.003688 \n",
"KCNB1 0.003688 \n",
"KCNC3 0.003688 \n",
"KCNH2 0.025866 \n",
"KCNK12 0.003688 \n",
"MMP24 0.003688 \n",
"OGDHL 0.012767 \n",
"PCDH10 0.003688 \n",
"PHF21B 0.003688 \n",
"SCAMP5 0.003688 \n",
"SCN3B 0.003688 \n",
"SLC16A9 0.003688 \n",
"SLC2A3 0.010110 \n",
"SLC6A17 0.003688 \n",
"SYP 0.003688 \n",
"TMEM145 0.003688 \n",
"TMEM179 0.003688 \n",
"TMEM198 0.003688 \n",
"VSTM2L 0.003688 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.620602 \n",
"BSN 1.530775 \n",
"CACNA1B 2.040234 \n",
"CDK5R2 1.751436 \n",
"DLGAP3 1.461937 \n",
"FBXO41 0.638783 \n",
"FNDC5 0.816770 \n",
"FSTL4 1.161524 \n",
"GABBR2 0.760901 \n",
"GPR153 0.586308 \n",
"GPRIN1 0.761617 \n",
"KCNB1 1.926129 \n",
"KCNC3 1.069948 \n",
"KCNH2 0.523554 \n",
"KCNK12 1.798434 \n",
"MMP24 1.919311 \n",
"OGDHL 0.555831 \n",
"PCDH10 0.650308 \n",
"PHF21B 0.622744 \n",
"SCAMP5 0.880257 \n",
"SCN3B 1.290515 \n",
"SLC16A9 0.714061 \n",
"SLC2A3 0.454331 \n",
"SLC6A17 0.661889 \n",
"SYP 1.330308 \n",
"TMEM145 1.310718 \n",
"TMEM179 1.144417 \n",
"TMEM198 1.193511 \n",
"VSTM2L 1.109992 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_q \n",
"gene_id \n",
"ACSL6 3.199196e-02 \n",
"BSN 2.831440e-08 \n",
"CACNA1B 2.517821e-37 \n",
"CDK5R2 3.841797e-12 \n",
"DLGAP3 4.783860e-16 \n",
"FBXO41 2.413352e-04 \n",
"FNDC5 7.937957e-06 \n",
"FSTL4 6.264628e-07 \n",
"GABBR2 2.351245e-04 \n",
"GPR153 2.421624e-04 \n",
"GPRIN1 6.955227e-10 \n",
"KCNB1 2.675223e-14 \n",
"KCNC3 9.471922e-05 \n",
"KCNH2 4.206006e-02 \n",
"KCNK12 1.954618e-07 \n",
"MMP24 8.883964e-48 \n",
"OGDHL 2.431304e-04 \n",
"PCDH10 5.404578e-04 \n",
"PHF21B 9.211815e-06 \n",
"SCAMP5 1.326498e-13 \n",
"SCN3B 4.203802e-09 \n",
"SLC16A9 2.535538e-06 \n",
"SLC2A3 8.410604e-03 \n",
"SLC6A17 6.528871e-03 \n",
"SYP 1.010528e-23 \n",
"TMEM145 5.504090e-17 \n",
"TMEM179 6.849633e-03 \n",
"TMEM198 1.932551e-14 \n",
"VSTM2L 1.140924e-05 "
]
},
"execution_count": 6,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"cavadas_et_al_results"
]
},
{
"cell_type": "markdown",
"id": "663b1faa",
"metadata": {},
"source": [
"Use mygene API to assign additional metadata"
]
},
{
"cell_type": "code",
"execution_count": 7,
"id": "ad8956a4",
"metadata": {},
"outputs": [],
"source": [
"import mygene\n",
"mg = mygene.MyGeneInfo()"
]
},
{
"cell_type": "code",
"execution_count": 8,
"id": "50e57fac",
"metadata": {},
"outputs": [],
"source": [
"def process_mygene_hit(hit):\n",
" if 'ensembl' not in hit:\n",
" ensembl = None\n",
" elif isinstance(hit['ensembl'], list):\n",
" ensembl = ';'.join([e['gene'] for e in hit['ensembl']])\n",
" else:\n",
" ensembl = hit['ensembl']['gene']\n",
"\n",
" if 'uniprot' not in hit:\n",
" uniprot = None\n",
" elif 'Swiss-Prot' in hit['uniprot']:\n",
" if isinstance(hit['uniprot']['Swiss-Prot'], list):\n",
" uniprot = ';'.join(hit['uniprot']['Swiss-Prot'])\n",
" else:\n",
" uniprot = hit['uniprot']['Swiss-Prot']\n",
" elif 'TrEMBL' in hit['uniprot']:\n",
" if isinstance(hit['uniprot']['TrEMBL'], list):\n",
" uniprot = ';'.join(hit['uniprot']['TrEMBL'])\n",
" else:\n",
" uniprot = hit['uniprot']['TrEMBL']\n",
" else:\n",
" raise Exception(f\"Cannot parse uniprot for {hit!r}\")\n",
" \n",
" return hit['symbol'], hit.get('entrezgene', None), ensembl, uniprot"
]
},
{
"cell_type": "code",
"execution_count": 9,
"id": "abeaad33",
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"100%|██████████| 29/29 [00:11<00:00, 2.45it/s]"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"One-to-many hits:\n",
"[]\n",
"Data was downloaded from MyGene at 2021-04-06T20:52:48.847870\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n"
]
}
],
"source": [
"from datetime import datetime\n",
"\n",
"mapping = []\n",
"multihits = []\n",
"\n",
"mg_kwargs = dict(species='human',\n",
" fields=['ensembl.gene', 'entrezgene', 'symbol', 'uniprot'])\n",
"\n",
"for query in tqdm(cavadas_et_al_results.index):\n",
" \n",
" # For some reason querymany fails...\n",
" response = mg.query(f'symbol:{query}', **mg_kwargs)\n",
" \n",
" hits = response['hits']\n",
" \n",
" if len(hits) == 0:\n",
" print(f\"Symbol hits failed for {query}, trying alias\")\n",
" response = mg.query(f'alias:{query}', **mg_kwargs)\n",
" hits = response['hits']\n",
" \n",
" if len(hits) > 1:\n",
" multihits.append(query)\n",
" \n",
" for hit in hits:\n",
" \n",
" hit_symbol, hit_entrez, hit_ensembl, hit_uniprot = process_mygene_hit(hit)\n",
" \n",
" mapping.append([query, \n",
" hit_symbol, hit_entrez,\n",
" hit_ensembl, hit_uniprot])\n",
"\n",
" \n",
"mapping = pd.DataFrame(mapping, columns=['cavadas_et_al_symbol', 'symbol', 'entrez_gene', 'ensembl_gene', 'uniprot'])\n",
" \n",
"print(\"One-to-many hits:\")\n",
"print(multihits)\n",
"\n",
"print('Data was downloaded from MyGene at {}'.format(datetime.now().isoformat()))"
]
},
{
"cell_type": "code",
"execution_count": 10,
"id": "52dda8ee",
"metadata": {},
"outputs": [],
"source": [
"mapping = mapping.set_index('cavadas_et_al_symbol')"
]
},
{
"cell_type": "code",
"execution_count": 11,
"id": "05f1d7b3",
"metadata": {},
"outputs": [],
"source": [
"assert not mapping.index.duplicated().any()"
]
},
{
"cell_type": "markdown",
"id": "727c77a5",
"metadata": {},
"source": [
"The mapping strategy is fairly successful with no one-to-many hits and no items missing:"
]
},
{
"cell_type": "code",
"execution_count": 12,
"id": "7a1e266d",
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"Index([], dtype='object')"
]
},
"execution_count": 12,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"missing = cavadas_et_al_results.index.difference(mapping.index)\n",
"missing"
]
},
{
"cell_type": "markdown",
"id": "a490ae8d",
"metadata": {},
"source": [
"So we can augment and save the results:"
]
},
{
"cell_type": "code",
"execution_count": 13,
"id": "8be7f702",
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_edger_log2_fc</th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_edger_q</th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_cuffdiff_log2_fc</th>\n",
" <th>ctrl_rnai_1pct_vs_21pct_cuffdiff_q</th>\n",
" <th>rest_rnai_1pct_vs_21pct_edger_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_21pct_edger_q</th>\n",
" <th>rest_rnai_1pct_vs_21pct_cuffdiff_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_21pct_cuffdiff_q</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_edger_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_edger_q</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_log2_fc</th>\n",
" <th>rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_q</th>\n",
" <th>symbol_from_mygene</th>\n",
" <th>entrez_gene</th>\n",
" <th>ensembl_gene</th>\n",
" <th>uniprot</th>\n",
" </tr>\n",
" <tr>\n",
" <th>gene_id</th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" <th></th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>ACSL6</th>\n",
" <td>0.693035</td>\n",
" <td>0.003538</td>\n",
" <td>0.780701</td>\n",
" <td>7.263680e-04</td>\n",
" <td>1.401302</td>\n",
" <td>2.032425e-12</td>\n",
" <td>1.35732</td>\n",
" <td>0.000297</td>\n",
" <td>0.652839</td>\n",
" <td>0.003688</td>\n",
" <td>0.620602</td>\n",
" <td>3.199196e-02</td>\n",
" <td>ACSL6</td>\n",
" <td>23305</td>\n",
" <td>ENSG00000164398</td>\n",
" <td>Q9UKU0</td>\n",
" </tr>\n",
" <tr>\n",
" <th>BSN</th>\n",
" <td>1.112460</td>\n",
" <td>0.000909</td>\n",
" <td>1.099282</td>\n",
" <td>2.182676e-04</td>\n",
" <td>2.630058</td>\n",
" <td>2.177764e-23</td>\n",
" <td>2.63468</td>\n",
" <td>0.000297</td>\n",
" <td>1.510280</td>\n",
" <td>0.003688</td>\n",
" <td>1.530775</td>\n",
" <td>2.831440e-08</td>\n",
" <td>BSN</td>\n",
" <td>8927</td>\n",
" <td>ENSG00000164061</td>\n",
" <td>Q9UPA5</td>\n",
" </tr>\n",
" <tr>\n",
" <th>CACNA1B</th>\n",
" <td>0.671965</td>\n",
" <td>0.004034</td>\n",
" <td>0.747851</td>\n",
" <td>2.959385e-03</td>\n",
" <td>2.788085</td>\n",
" <td>8.261890e-59</td>\n",
" <td>2.87760</td>\n",
" <td>0.000297</td>\n",
" <td>2.194900</td>\n",
" <td>0.003688</td>\n",
" <td>2.040234</td>\n",
" <td>2.517821e-37</td>\n",
" <td>CACNA1B</td>\n",
" <td>774</td>\n",
" <td>ENSG00000148408</td>\n",
" <td>Q00975</td>\n",
" </tr>\n",
" <tr>\n",
" <th>CDK5R2</th>\n",
" <td>0.906606</td>\n",
" <td>0.010604</td>\n",
" <td>0.995753</td>\n",
" <td>3.212454e-02</td>\n",
" <td>2.747189</td>\n",
" <td>1.457558e-22</td>\n",
" <td>2.69818</td>\n",
" <td>0.000297</td>\n",
" <td>1.781610</td>\n",
" <td>0.003688</td>\n",
" <td>1.751436</td>\n",
" <td>3.841797e-12</td>\n",
" <td>CDK5R2</td>\n",
" <td>8941</td>\n",
" <td>ENSG00000171450</td>\n",
" <td>Q13319</td>\n",
" </tr>\n",
" <tr>\n",
" <th>DLGAP3</th>\n",
" <td>0.752587</td>\n",
" <td>0.000909</td>\n",
" <td>0.694043</td>\n",
" <td>9.614567e-03</td>\n",
" <td>2.155980</td>\n",
" <td>2.843907e-30</td>\n",
" <td>2.09444</td>\n",
" <td>0.000297</td>\n",
" <td>1.332100</td>\n",
" <td>0.003688</td>\n",
" <td>1.461937</td>\n",
" <td>4.783860e-16</td>\n",
" <td>DLGAP3</td>\n",
" <td>58512</td>\n",
" <td>ENSG00000116544</td>\n",
" <td>O95886</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FBXO41</th>\n",
" <td>1.031050</td>\n",
" <td>0.000909</td>\n",
" <td>0.948953</td>\n",
" <td>5.459367e-09</td>\n",
" <td>1.587736</td>\n",
" <td>1.200640e-26</td>\n",
" <td>1.63260</td>\n",
" <td>0.000297</td>\n",
" <td>0.590333</td>\n",
" <td>0.003688</td>\n",
" <td>0.638783</td>\n",
" <td>2.413352e-04</td>\n",
" <td>FBXO41</td>\n",
" <td>150726</td>\n",
" <td>ENSG00000163013</td>\n",
" <td>Q8TF61</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FNDC5</th>\n",
" <td>0.899575</td>\n",
" <td>0.000909</td>\n",
" <td>0.906137</td>\n",
" <td>5.380895e-05</td>\n",
" <td>1.722907</td>\n",
" <td>8.803560e-22</td>\n",
" <td>1.69674</td>\n",
" <td>0.000297</td>\n",
" <td>0.786390</td>\n",
" <td>0.003688</td>\n",
" <td>0.816770</td>\n",
" <td>7.937957e-06</td>\n",
" <td>FNDC5</td>\n",
" <td>252995</td>\n",
" <td>ENSG00000160097</td>\n",
" <td>Q8NAU1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>FSTL4</th>\n",
" <td>0.673053</td>\n",
" <td>0.013110</td>\n",
" <td>0.739232</td>\n",
" <td>3.237984e-02</td>\n",
" <td>1.900756</td>\n",
" <td>6.090909e-16</td>\n",
" <td>1.88138</td>\n",
" <td>0.000297</td>\n",
" <td>1.196870</td>\n",
" <td>0.003688</td>\n",
" <td>1.161524</td>\n",
" <td>6.264628e-07</td>\n",
" <td>FSTL4</td>\n",
" <td>23105</td>\n",
" <td>ENSG00000053108</td>\n",
" <td>Q6MZW2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GABBR2</th>\n",
" <td>0.640786</td>\n",
" <td>0.004546</td>\n",
" <td>0.645720</td>\n",
" <td>3.119686e-03</td>\n",
" <td>1.406621</td>\n",
" <td>4.255258e-15</td>\n",
" <td>1.34725</td>\n",
" <td>0.000297</td>\n",
" <td>0.695420</td>\n",
" <td>0.003688</td>\n",
" <td>0.760901</td>\n",
" <td>2.351245e-04</td>\n",
" <td>GABBR2</td>\n",
" <td>9568</td>\n",
" <td>ENSG00000136928</td>\n",
" <td>O75899</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GPR153</th>\n",
" <td>0.705581</td>\n",
" <td>0.000909</td>\n",
" <td>0.667895</td>\n",
" <td>3.105876e-05</td>\n",
" <td>1.254204</td>\n",
" <td>9.336971e-20</td>\n",
" <td>1.18264</td>\n",
" <td>0.000297</td>\n",
" <td>0.466654</td>\n",
" <td>0.029808</td>\n",
" <td>0.586308</td>\n",
" <td>2.421624e-04</td>\n",
" <td>GPR153</td>\n",
" <td>387509</td>\n",
" <td>ENSG00000158292</td>\n",
" <td>Q6NV75</td>\n",
" </tr>\n",
" <tr>\n",
" <th>GPRIN1</th>\n",
" <td>0.478252</td>\n",
" <td>0.022322</td>\n",
" <td>0.477798</td>\n",
" <td>5.594201e-04</td>\n",
" <td>1.239415</td>\n",
" <td>2.815636e-26</td>\n",
" <td>1.21924</td>\n",
" <td>0.000297</td>\n",
" <td>0.730595</td>\n",
" <td>0.003688</td>\n",
" <td>0.761617</td>\n",
" <td>6.955227e-10</td>\n",
" <td>GPRIN1</td>\n",
" <td>114787</td>\n",
" <td>ENSG00000169258</td>\n",
" <td>Q7Z2K8</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNB1</th>\n",
" <td>1.319140</td>\n",
" <td>0.000909</td>\n",
" <td>0.900296</td>\n",
" <td>4.169021e-02</td>\n",
" <td>2.826425</td>\n",
" <td>7.985477e-25</td>\n",
" <td>3.12326</td>\n",
" <td>0.000297</td>\n",
" <td>1.793330</td>\n",
" <td>0.003688</td>\n",
" <td>1.926129</td>\n",
" <td>2.675223e-14</td>\n",
" <td>KCNB1</td>\n",
" <td>3745</td>\n",
" <td>ENSG00000158445</td>\n",
" <td>Q14721</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNC3</th>\n",
" <td>1.435230</td>\n",
" <td>0.000909</td>\n",
" <td>1.371845</td>\n",
" <td>1.568677e-06</td>\n",
" <td>2.441793</td>\n",
" <td>2.662866e-22</td>\n",
" <td>2.43875</td>\n",
" <td>0.000297</td>\n",
" <td>0.991693</td>\n",
" <td>0.003688</td>\n",
" <td>1.069948</td>\n",
" <td>9.471922e-05</td>\n",
" <td>KCNC3</td>\n",
" <td>3748</td>\n",
" <td>ENSG00000131398</td>\n",
" <td>Q14003</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNH2</th>\n",
" <td>0.579627</td>\n",
" <td>0.008653</td>\n",
" <td>0.490217</td>\n",
" <td>2.227335e-02</td>\n",
" <td>1.013771</td>\n",
" <td>5.168378e-09</td>\n",
" <td>1.08432</td>\n",
" <td>0.000297</td>\n",
" <td>0.494435</td>\n",
" <td>0.025866</td>\n",
" <td>0.523554</td>\n",
" <td>4.206006e-02</td>\n",
" <td>KCNH2</td>\n",
" <td>3757</td>\n",
" <td>ENSG00000055118</td>\n",
" <td>Q12809</td>\n",
" </tr>\n",
" <tr>\n",
" <th>KCNK12</th>\n",
" <td>1.335300</td>\n",
" <td>0.035775</td>\n",
" <td>1.463659</td>\n",
" <td>2.169996e-02</td>\n",
" <td>3.262093</td>\n",
" <td>1.246370e-16</td>\n",
" <td>3.38070</td>\n",
" <td>0.000297</td>\n",
" <td>2.035020</td>\n",
" <td>0.003688</td>\n",
" <td>1.798434</td>\n",
" <td>1.954618e-07</td>\n",
" <td>KCNK12</td>\n",
" <td>56660</td>\n",
" <td>ENSG00000184261</td>\n",
" <td>Q9HB15</td>\n",
" </tr>\n",
" <tr>\n",
" <th>MMP24</th>\n",
" <td>0.474043</td>\n",
" <td>0.048878</td>\n",
" <td>0.515980</td>\n",
" <td>1.132582e-02</td>\n",
" <td>2.435291</td>\n",
" <td>1.100123e-68</td>\n",
" <td>2.52971</td>\n",
" <td>0.000297</td>\n",
" <td>2.045560</td>\n",
" <td>0.003688</td>\n",
" <td>1.919311</td>\n",
" <td>8.883964e-48</td>\n",
" <td>MMP24</td>\n",
" <td>10893</td>\n",
" <td>ENSG00000125966</td>\n",
" <td>Q9Y5R2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>OGDHL</th>\n",
" <td>0.695533</td>\n",
" <td>0.000909</td>\n",
" <td>0.588846</td>\n",
" <td>7.989685e-05</td>\n",
" <td>1.144678</td>\n",
" <td>6.688624e-19</td>\n",
" <td>1.20615</td>\n",
" <td>0.000297</td>\n",
" <td>0.500505</td>\n",
" <td>0.012767</td>\n",
" <td>0.555831</td>\n",
" <td>2.431304e-04</td>\n",
" <td>OGDHL</td>\n",
" <td>55753</td>\n",
" <td>ENSG00000197444</td>\n",
" <td>Q9ULD0</td>\n",
" </tr>\n",
" <tr>\n",
" <th>PCDH10</th>\n",
" <td>0.940026</td>\n",
" <td>0.000909</td>\n",
" <td>0.901610</td>\n",
" <td>4.529861e-08</td>\n",
" <td>1.551918</td>\n",
" <td>3.237937e-24</td>\n",
" <td>1.57690</td>\n",
" <td>0.000297</td>\n",
" <td>0.625683</td>\n",
" <td>0.003688</td>\n",
" <td>0.650308</td>\n",
" <td>5.404578e-04</td>\n",
" <td>PCDH10</td>\n",
" <td>57575</td>\n",
" <td>ENSG00000138650</td>\n",
" <td>Q9P2E7</td>\n",
" </tr>\n",
" <tr>\n",
" <th>PHF21B</th>\n",
" <td>0.956119</td>\n",
" <td>0.000909</td>\n",
" <td>0.910720</td>\n",
" <td>2.396220e-10</td>\n",
" <td>1.533464</td>\n",
" <td>1.873001e-32</td>\n",
" <td>1.62192</td>\n",
" <td>0.000297</td>\n",
" <td>0.655629</td>\n",
" <td>0.003688</td>\n",
" <td>0.622744</td>\n",
" <td>9.211815e-06</td>\n",
" <td>PHF21B</td>\n",
" <td>112885</td>\n",
" <td>ENSG00000056487</td>\n",
" <td>Q96EK2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SCAMP5</th>\n",
" <td>0.624796</td>\n",
" <td>0.000909</td>\n",
" <td>0.641946</td>\n",
" <td>2.544391e-06</td>\n",
" <td>1.522203</td>\n",
" <td>2.034301e-38</td>\n",
" <td>1.51348</td>\n",
" <td>0.000297</td>\n",
" <td>0.878038</td>\n",
" <td>0.003688</td>\n",
" <td>0.880257</td>\n",
" <td>1.326498e-13</td>\n",
" <td>SCAMP5</td>\n",
" <td>192683</td>\n",
" <td>ENSG00000198794</td>\n",
" <td>Q8TAC9</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SCN3B</th>\n",
" <td>0.872131</td>\n",
" <td>0.000909</td>\n",
" <td>0.927798</td>\n",
" <td>2.143974e-03</td>\n",
" <td>2.218313</td>\n",
" <td>1.026760e-22</td>\n",
" <td>2.18769</td>\n",
" <td>0.000297</td>\n",
" <td>1.304940</td>\n",
" <td>0.003688</td>\n",
" <td>1.290515</td>\n",
" <td>4.203802e-09</td>\n",
" <td>SCN3B</td>\n",
" <td>55800</td>\n",
" <td>ENSG00000166257</td>\n",
" <td>Q9NY72</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC16A9</th>\n",
" <td>0.499922</td>\n",
" <td>0.025529</td>\n",
" <td>0.433671</td>\n",
" <td>1.867624e-02</td>\n",
" <td>1.147731</td>\n",
" <td>3.695734e-16</td>\n",
" <td>1.11560</td>\n",
" <td>0.000297</td>\n",
" <td>0.604635</td>\n",
" <td>0.003688</td>\n",
" <td>0.714061</td>\n",
" <td>2.535538e-06</td>\n",
" <td>SLC16A9</td>\n",
" <td>220963</td>\n",
" <td>ENSG00000165449</td>\n",
" <td>Q7RTY1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC2A3</th>\n",
" <td>1.306540</td>\n",
" <td>0.000909</td>\n",
" <td>1.320867</td>\n",
" <td>5.702228e-19</td>\n",
" <td>1.775198</td>\n",
" <td>6.543914e-38</td>\n",
" <td>1.81367</td>\n",
" <td>0.000297</td>\n",
" <td>0.496610</td>\n",
" <td>0.010110</td>\n",
" <td>0.454331</td>\n",
" <td>8.410604e-03</td>\n",
" <td>SLC2A3</td>\n",
" <td>6515</td>\n",
" <td>ENSG00000059804</td>\n",
" <td>P11169</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SLC6A17</th>\n",
" <td>0.817272</td>\n",
" <td>0.000909</td>\n",
" <td>0.611181</td>\n",
" <td>1.617834e-02</td>\n",
" <td>1.273070</td>\n",
" <td>8.440338e-11</td>\n",
" <td>1.46602</td>\n",
" <td>0.000297</td>\n",
" <td>0.637613</td>\n",
" <td>0.003688</td>\n",
" <td>0.661889</td>\n",
" <td>6.528871e-03</td>\n",
" <td>SLC6A17</td>\n",
" <td>388662</td>\n",
" <td>ENSG00000197106</td>\n",
" <td>Q9H1V8</td>\n",
" </tr>\n",
" <tr>\n",
" <th>SYP</th>\n",
" <td>0.528723</td>\n",
" <td>0.011246</td>\n",
" <td>0.545551</td>\n",
" <td>1.136552e-03</td>\n",
" <td>1.875860</td>\n",
" <td>1.724697e-44</td>\n",
" <td>1.88800</td>\n",
" <td>0.000297</td>\n",
" <td>1.349150</td>\n",
" <td>0.003688</td>\n",
" <td>1.330308</td>\n",
" <td>1.010528e-23</td>\n",
" <td>SYP</td>\n",
" <td>6855</td>\n",
" <td>ENSG00000102003</td>\n",
" <td>P08247</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM145</th>\n",
" <td>0.716700</td>\n",
" <td>0.002966</td>\n",
" <td>0.648081</td>\n",
" <td>2.498289e-03</td>\n",
" <td>1.958799</td>\n",
" <td>6.128832e-34</td>\n",
" <td>1.97304</td>\n",
" <td>0.000297</td>\n",
" <td>1.245750</td>\n",
" <td>0.003688</td>\n",
" <td>1.310718</td>\n",
" <td>5.504090e-17</td>\n",
" <td>TMEM145</td>\n",
" <td>284339</td>\n",
" <td>ENSG00000167619</td>\n",
" <td>Q8NBT3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM179</th>\n",
" <td>1.318500</td>\n",
" <td>0.008246</td>\n",
" <td>1.227620</td>\n",
" <td>1.794627e-02</td>\n",
" <td>2.372037</td>\n",
" <td>2.433588e-10</td>\n",
" <td>2.59425</td>\n",
" <td>0.000297</td>\n",
" <td>1.264340</td>\n",
" <td>0.003688</td>\n",
" <td>1.144417</td>\n",
" <td>6.849633e-03</td>\n",
" <td>TMEM179</td>\n",
" <td>388021</td>\n",
" <td>ENSG00000258986;ENSG00000276342</td>\n",
" <td>Q6ZVK1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>TMEM198</th>\n",
" <td>0.529671</td>\n",
" <td>0.022554</td>\n",
" <td>0.558512</td>\n",
" <td>8.561365e-03</td>\n",
" <td>1.752023</td>\n",
" <td>1.329830e-28</td>\n",
" <td>1.72965</td>\n",
" <td>0.000297</td>\n",
" <td>1.189730</td>\n",
" <td>0.003688</td>\n",
" <td>1.193511</td>\n",
" <td>1.932551e-14</td>\n",
" <td>TMEM198</td>\n",
" <td>130612</td>\n",
" <td>ENSG00000188760</td>\n",
" <td>Q66K66</td>\n",
" </tr>\n",
" <tr>\n",
" <th>VSTM2L</th>\n",
" <td>0.994718</td>\n",
" <td>0.000909</td>\n",
" <td>0.894290</td>\n",
" <td>3.940652e-03</td>\n",
" <td>2.004282</td>\n",
" <td>9.405065e-17</td>\n",
" <td>2.06225</td>\n",
" <td>0.000297</td>\n",
" <td>1.057880</td>\n",
" <td>0.003688</td>\n",
" <td>1.109992</td>\n",
" <td>1.140924e-05</td>\n",
" <td>VSTM2L</td>\n",
" <td>128434</td>\n",
" <td>ENSG00000132821</td>\n",
" <td>Q96N03</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" ctrl_rnai_1pct_vs_21pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.693035 \n",
"BSN 1.112460 \n",
"CACNA1B 0.671965 \n",
"CDK5R2 0.906606 \n",
"DLGAP3 0.752587 \n",
"FBXO41 1.031050 \n",
"FNDC5 0.899575 \n",
"FSTL4 0.673053 \n",
"GABBR2 0.640786 \n",
"GPR153 0.705581 \n",
"GPRIN1 0.478252 \n",
"KCNB1 1.319140 \n",
"KCNC3 1.435230 \n",
"KCNH2 0.579627 \n",
"KCNK12 1.335300 \n",
"MMP24 0.474043 \n",
"OGDHL 0.695533 \n",
"PCDH10 0.940026 \n",
"PHF21B 0.956119 \n",
"SCAMP5 0.624796 \n",
"SCN3B 0.872131 \n",
"SLC16A9 0.499922 \n",
"SLC2A3 1.306540 \n",
"SLC6A17 0.817272 \n",
"SYP 0.528723 \n",
"TMEM145 0.716700 \n",
"TMEM179 1.318500 \n",
"TMEM198 0.529671 \n",
"VSTM2L 0.994718 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_edger_q \\\n",
"gene_id \n",
"ACSL6 0.003538 \n",
"BSN 0.000909 \n",
"CACNA1B 0.004034 \n",
"CDK5R2 0.010604 \n",
"DLGAP3 0.000909 \n",
"FBXO41 0.000909 \n",
"FNDC5 0.000909 \n",
"FSTL4 0.013110 \n",
"GABBR2 0.004546 \n",
"GPR153 0.000909 \n",
"GPRIN1 0.022322 \n",
"KCNB1 0.000909 \n",
"KCNC3 0.000909 \n",
"KCNH2 0.008653 \n",
"KCNK12 0.035775 \n",
"MMP24 0.048878 \n",
"OGDHL 0.000909 \n",
"PCDH10 0.000909 \n",
"PHF21B 0.000909 \n",
"SCAMP5 0.000909 \n",
"SCN3B 0.000909 \n",
"SLC16A9 0.025529 \n",
"SLC2A3 0.000909 \n",
"SLC6A17 0.000909 \n",
"SYP 0.011246 \n",
"TMEM145 0.002966 \n",
"TMEM179 0.008246 \n",
"TMEM198 0.022554 \n",
"VSTM2L 0.000909 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.780701 \n",
"BSN 1.099282 \n",
"CACNA1B 0.747851 \n",
"CDK5R2 0.995753 \n",
"DLGAP3 0.694043 \n",
"FBXO41 0.948953 \n",
"FNDC5 0.906137 \n",
"FSTL4 0.739232 \n",
"GABBR2 0.645720 \n",
"GPR153 0.667895 \n",
"GPRIN1 0.477798 \n",
"KCNB1 0.900296 \n",
"KCNC3 1.371845 \n",
"KCNH2 0.490217 \n",
"KCNK12 1.463659 \n",
"MMP24 0.515980 \n",
"OGDHL 0.588846 \n",
"PCDH10 0.901610 \n",
"PHF21B 0.910720 \n",
"SCAMP5 0.641946 \n",
"SCN3B 0.927798 \n",
"SLC16A9 0.433671 \n",
"SLC2A3 1.320867 \n",
"SLC6A17 0.611181 \n",
"SYP 0.545551 \n",
"TMEM145 0.648081 \n",
"TMEM179 1.227620 \n",
"TMEM198 0.558512 \n",
"VSTM2L 0.894290 \n",
"\n",
" ctrl_rnai_1pct_vs_21pct_cuffdiff_q \\\n",
"gene_id \n",
"ACSL6 7.263680e-04 \n",
"BSN 2.182676e-04 \n",
"CACNA1B 2.959385e-03 \n",
"CDK5R2 3.212454e-02 \n",
"DLGAP3 9.614567e-03 \n",
"FBXO41 5.459367e-09 \n",
"FNDC5 5.380895e-05 \n",
"FSTL4 3.237984e-02 \n",
"GABBR2 3.119686e-03 \n",
"GPR153 3.105876e-05 \n",
"GPRIN1 5.594201e-04 \n",
"KCNB1 4.169021e-02 \n",
"KCNC3 1.568677e-06 \n",
"KCNH2 2.227335e-02 \n",
"KCNK12 2.169996e-02 \n",
"MMP24 1.132582e-02 \n",
"OGDHL 7.989685e-05 \n",
"PCDH10 4.529861e-08 \n",
"PHF21B 2.396220e-10 \n",
"SCAMP5 2.544391e-06 \n",
"SCN3B 2.143974e-03 \n",
"SLC16A9 1.867624e-02 \n",
"SLC2A3 5.702228e-19 \n",
"SLC6A17 1.617834e-02 \n",
"SYP 1.136552e-03 \n",
"TMEM145 2.498289e-03 \n",
"TMEM179 1.794627e-02 \n",
"TMEM198 8.561365e-03 \n",
"VSTM2L 3.940652e-03 \n",
"\n",
" rest_rnai_1pct_vs_21pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 1.401302 \n",
"BSN 2.630058 \n",
"CACNA1B 2.788085 \n",
"CDK5R2 2.747189 \n",
"DLGAP3 2.155980 \n",
"FBXO41 1.587736 \n",
"FNDC5 1.722907 \n",
"FSTL4 1.900756 \n",
"GABBR2 1.406621 \n",
"GPR153 1.254204 \n",
"GPRIN1 1.239415 \n",
"KCNB1 2.826425 \n",
"KCNC3 2.441793 \n",
"KCNH2 1.013771 \n",
"KCNK12 3.262093 \n",
"MMP24 2.435291 \n",
"OGDHL 1.144678 \n",
"PCDH10 1.551918 \n",
"PHF21B 1.533464 \n",
"SCAMP5 1.522203 \n",
"SCN3B 2.218313 \n",
"SLC16A9 1.147731 \n",
"SLC2A3 1.775198 \n",
"SLC6A17 1.273070 \n",
"SYP 1.875860 \n",
"TMEM145 1.958799 \n",
"TMEM179 2.372037 \n",
"TMEM198 1.752023 \n",
"VSTM2L 2.004282 \n",
"\n",
" rest_rnai_1pct_vs_21pct_edger_q \\\n",
"gene_id \n",
"ACSL6 2.032425e-12 \n",
"BSN 2.177764e-23 \n",
"CACNA1B 8.261890e-59 \n",
"CDK5R2 1.457558e-22 \n",
"DLGAP3 2.843907e-30 \n",
"FBXO41 1.200640e-26 \n",
"FNDC5 8.803560e-22 \n",
"FSTL4 6.090909e-16 \n",
"GABBR2 4.255258e-15 \n",
"GPR153 9.336971e-20 \n",
"GPRIN1 2.815636e-26 \n",
"KCNB1 7.985477e-25 \n",
"KCNC3 2.662866e-22 \n",
"KCNH2 5.168378e-09 \n",
"KCNK12 1.246370e-16 \n",
"MMP24 1.100123e-68 \n",
"OGDHL 6.688624e-19 \n",
"PCDH10 3.237937e-24 \n",
"PHF21B 1.873001e-32 \n",
"SCAMP5 2.034301e-38 \n",
"SCN3B 1.026760e-22 \n",
"SLC16A9 3.695734e-16 \n",
"SLC2A3 6.543914e-38 \n",
"SLC6A17 8.440338e-11 \n",
"SYP 1.724697e-44 \n",
"TMEM145 6.128832e-34 \n",
"TMEM179 2.433588e-10 \n",
"TMEM198 1.329830e-28 \n",
"VSTM2L 9.405065e-17 \n",
"\n",
" rest_rnai_1pct_vs_21pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 1.35732 \n",
"BSN 2.63468 \n",
"CACNA1B 2.87760 \n",
"CDK5R2 2.69818 \n",
"DLGAP3 2.09444 \n",
"FBXO41 1.63260 \n",
"FNDC5 1.69674 \n",
"FSTL4 1.88138 \n",
"GABBR2 1.34725 \n",
"GPR153 1.18264 \n",
"GPRIN1 1.21924 \n",
"KCNB1 3.12326 \n",
"KCNC3 2.43875 \n",
"KCNH2 1.08432 \n",
"KCNK12 3.38070 \n",
"MMP24 2.52971 \n",
"OGDHL 1.20615 \n",
"PCDH10 1.57690 \n",
"PHF21B 1.62192 \n",
"SCAMP5 1.51348 \n",
"SCN3B 2.18769 \n",
"SLC16A9 1.11560 \n",
"SLC2A3 1.81367 \n",
"SLC6A17 1.46602 \n",
"SYP 1.88800 \n",
"TMEM145 1.97304 \n",
"TMEM179 2.59425 \n",
"TMEM198 1.72965 \n",
"VSTM2L 2.06225 \n",
"\n",
" rest_rnai_1pct_vs_21pct_cuffdiff_q \\\n",
"gene_id \n",
"ACSL6 0.000297 \n",
"BSN 0.000297 \n",
"CACNA1B 0.000297 \n",
"CDK5R2 0.000297 \n",
"DLGAP3 0.000297 \n",
"FBXO41 0.000297 \n",
"FNDC5 0.000297 \n",
"FSTL4 0.000297 \n",
"GABBR2 0.000297 \n",
"GPR153 0.000297 \n",
"GPRIN1 0.000297 \n",
"KCNB1 0.000297 \n",
"KCNC3 0.000297 \n",
"KCNH2 0.000297 \n",
"KCNK12 0.000297 \n",
"MMP24 0.000297 \n",
"OGDHL 0.000297 \n",
"PCDH10 0.000297 \n",
"PHF21B 0.000297 \n",
"SCAMP5 0.000297 \n",
"SCN3B 0.000297 \n",
"SLC16A9 0.000297 \n",
"SLC2A3 0.000297 \n",
"SLC6A17 0.000297 \n",
"SYP 0.000297 \n",
"TMEM145 0.000297 \n",
"TMEM179 0.000297 \n",
"TMEM198 0.000297 \n",
"VSTM2L 0.000297 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_edger_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.652839 \n",
"BSN 1.510280 \n",
"CACNA1B 2.194900 \n",
"CDK5R2 1.781610 \n",
"DLGAP3 1.332100 \n",
"FBXO41 0.590333 \n",
"FNDC5 0.786390 \n",
"FSTL4 1.196870 \n",
"GABBR2 0.695420 \n",
"GPR153 0.466654 \n",
"GPRIN1 0.730595 \n",
"KCNB1 1.793330 \n",
"KCNC3 0.991693 \n",
"KCNH2 0.494435 \n",
"KCNK12 2.035020 \n",
"MMP24 2.045560 \n",
"OGDHL 0.500505 \n",
"PCDH10 0.625683 \n",
"PHF21B 0.655629 \n",
"SCAMP5 0.878038 \n",
"SCN3B 1.304940 \n",
"SLC16A9 0.604635 \n",
"SLC2A3 0.496610 \n",
"SLC6A17 0.637613 \n",
"SYP 1.349150 \n",
"TMEM145 1.245750 \n",
"TMEM179 1.264340 \n",
"TMEM198 1.189730 \n",
"VSTM2L 1.057880 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_edger_q \\\n",
"gene_id \n",
"ACSL6 0.003688 \n",
"BSN 0.003688 \n",
"CACNA1B 0.003688 \n",
"CDK5R2 0.003688 \n",
"DLGAP3 0.003688 \n",
"FBXO41 0.003688 \n",
"FNDC5 0.003688 \n",
"FSTL4 0.003688 \n",
"GABBR2 0.003688 \n",
"GPR153 0.029808 \n",
"GPRIN1 0.003688 \n",
"KCNB1 0.003688 \n",
"KCNC3 0.003688 \n",
"KCNH2 0.025866 \n",
"KCNK12 0.003688 \n",
"MMP24 0.003688 \n",
"OGDHL 0.012767 \n",
"PCDH10 0.003688 \n",
"PHF21B 0.003688 \n",
"SCAMP5 0.003688 \n",
"SCN3B 0.003688 \n",
"SLC16A9 0.003688 \n",
"SLC2A3 0.010110 \n",
"SLC6A17 0.003688 \n",
"SYP 0.003688 \n",
"TMEM145 0.003688 \n",
"TMEM179 0.003688 \n",
"TMEM198 0.003688 \n",
"VSTM2L 0.003688 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_log2_fc \\\n",
"gene_id \n",
"ACSL6 0.620602 \n",
"BSN 1.530775 \n",
"CACNA1B 2.040234 \n",
"CDK5R2 1.751436 \n",
"DLGAP3 1.461937 \n",
"FBXO41 0.638783 \n",
"FNDC5 0.816770 \n",
"FSTL4 1.161524 \n",
"GABBR2 0.760901 \n",
"GPR153 0.586308 \n",
"GPRIN1 0.761617 \n",
"KCNB1 1.926129 \n",
"KCNC3 1.069948 \n",
"KCNH2 0.523554 \n",
"KCNK12 1.798434 \n",
"MMP24 1.919311 \n",
"OGDHL 0.555831 \n",
"PCDH10 0.650308 \n",
"PHF21B 0.622744 \n",
"SCAMP5 0.880257 \n",
"SCN3B 1.290515 \n",
"SLC16A9 0.714061 \n",
"SLC2A3 0.454331 \n",
"SLC6A17 0.661889 \n",
"SYP 1.330308 \n",
"TMEM145 1.310718 \n",
"TMEM179 1.144417 \n",
"TMEM198 1.193511 \n",
"VSTM2L 1.109992 \n",
"\n",
" rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_q symbol_from_mygene \\\n",
"gene_id \n",
"ACSL6 3.199196e-02 ACSL6 \n",
"BSN 2.831440e-08 BSN \n",
"CACNA1B 2.517821e-37 CACNA1B \n",
"CDK5R2 3.841797e-12 CDK5R2 \n",
"DLGAP3 4.783860e-16 DLGAP3 \n",
"FBXO41 2.413352e-04 FBXO41 \n",
"FNDC5 7.937957e-06 FNDC5 \n",
"FSTL4 6.264628e-07 FSTL4 \n",
"GABBR2 2.351245e-04 GABBR2 \n",
"GPR153 2.421624e-04 GPR153 \n",
"GPRIN1 6.955227e-10 GPRIN1 \n",
"KCNB1 2.675223e-14 KCNB1 \n",
"KCNC3 9.471922e-05 KCNC3 \n",
"KCNH2 4.206006e-02 KCNH2 \n",
"KCNK12 1.954618e-07 KCNK12 \n",
"MMP24 8.883964e-48 MMP24 \n",
"OGDHL 2.431304e-04 OGDHL \n",
"PCDH10 5.404578e-04 PCDH10 \n",
"PHF21B 9.211815e-06 PHF21B \n",
"SCAMP5 1.326498e-13 SCAMP5 \n",
"SCN3B 4.203802e-09 SCN3B \n",
"SLC16A9 2.535538e-06 SLC16A9 \n",
"SLC2A3 8.410604e-03 SLC2A3 \n",
"SLC6A17 6.528871e-03 SLC6A17 \n",
"SYP 1.010528e-23 SYP \n",
"TMEM145 5.504090e-17 TMEM145 \n",
"TMEM179 6.849633e-03 TMEM179 \n",
"TMEM198 1.932551e-14 TMEM198 \n",
"VSTM2L 1.140924e-05 VSTM2L \n",
"\n",
" entrez_gene ensembl_gene uniprot \n",
"gene_id \n",
"ACSL6 23305 ENSG00000164398 Q9UKU0 \n",
"BSN 8927 ENSG00000164061 Q9UPA5 \n",
"CACNA1B 774 ENSG00000148408 Q00975 \n",
"CDK5R2 8941 ENSG00000171450 Q13319 \n",
"DLGAP3 58512 ENSG00000116544 O95886 \n",
"FBXO41 150726 ENSG00000163013 Q8TF61 \n",
"FNDC5 252995 ENSG00000160097 Q8NAU1 \n",
"FSTL4 23105 ENSG00000053108 Q6MZW2 \n",
"GABBR2 9568 ENSG00000136928 O75899 \n",
"GPR153 387509 ENSG00000158292 Q6NV75 \n",
"GPRIN1 114787 ENSG00000169258 Q7Z2K8 \n",
"KCNB1 3745 ENSG00000158445 Q14721 \n",
"KCNC3 3748 ENSG00000131398 Q14003 \n",
"KCNH2 3757 ENSG00000055118 Q12809 \n",
"KCNK12 56660 ENSG00000184261 Q9HB15 \n",
"MMP24 10893 ENSG00000125966 Q9Y5R2 \n",
"OGDHL 55753 ENSG00000197444 Q9ULD0 \n",
"PCDH10 57575 ENSG00000138650 Q9P2E7 \n",
"PHF21B 112885 ENSG00000056487 Q96EK2 \n",
"SCAMP5 192683 ENSG00000198794 Q8TAC9 \n",
"SCN3B 55800 ENSG00000166257 Q9NY72 \n",
"SLC16A9 220963 ENSG00000165449 Q7RTY1 \n",
"SLC2A3 6515 ENSG00000059804 P11169 \n",
"SLC6A17 388662 ENSG00000197106 Q9H1V8 \n",
"SYP 6855 ENSG00000102003 P08247 \n",
"TMEM145 284339 ENSG00000167619 Q8NBT3 \n",
"TMEM179 388021 ENSG00000258986;ENSG00000276342 Q6ZVK1 \n",
"TMEM198 130612 ENSG00000188760 Q66K66 \n",
"VSTM2L 128434 ENSG00000132821 Q96N03 "
]
},
"execution_count": 13,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"augmented_cavadas_et_al_results = cavadas_et_al_results.join(mapping)\n",
"augmented_cavadas_et_al_results = augmented_cavadas_et_al_results.rename(columns={'symbol': 'symbol_from_mygene'})\n",
"augmented_cavadas_et_al_results"
]
},
{
"cell_type": "code",
"execution_count": 14,
"id": "eda5a56d",
"metadata": {},
"outputs": [],
"source": [
"augmented_cavadas_et_al_results.to_csv('cavadas-et-al-2016-suppl-table-5-augmented.tsv', sep='\\t')"
]
},
{
"cell_type": "code",
"execution_count": 15,
"id": "dfcf66e3",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"-----\n",
"matplotlib 3.4.1\n",
"mygene 3.2.2\n",
"numpy 1.20.2\n",
"pandas 1.2.3\n",
"seaborn 0.11.1\n",
"sinfo 0.3.1\n",
"tqdm 4.60.0\n",
"-----\n",
"IPython 7.22.0\n",
"jupyter_client 6.1.12\n",
"jupyter_core 4.7.1\n",
"notebook 6.3.0\n",
"-----\n",
"Python 3.8.5 (default, Sep 4 2020, 02:22:02) [Clang 10.0.0 ]\n",
"macOS-10.15.7-x86_64-i386-64bit\n",
"8 logical CPU cores, i386\n",
"-----\n",
"Session information updated at 2021-04-06 20:52\n"
]
}
],
"source": [
"from sinfo import sinfo\n",
"sinfo(write_req_file=False)"
]
},
{
"cell_type": "code",
"execution_count": 16,
"id": "56d4605f",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"gene_id\tctrl_rnai_1pct_vs_21pct_edger_log2_fc\tctrl_rnai_1pct_vs_21pct_edger_q\tctrl_rnai_1pct_vs_21pct_cuffdiff_log2_fc\tctrl_rnai_1pct_vs_21pct_cuffdiff_q\trest_rnai_1pct_vs_21pct_edger_log2_fc\trest_rnai_1pct_vs_21pct_edger_q\trest_rnai_1pct_vs_21pct_cuffdiff_log2_fc\trest_rnai_1pct_vs_21pct_cuffdiff_q\trest_rnai_1pct_vs_ctrl_1pct_edger_log2_fc\trest_rnai_1pct_vs_ctrl_1pct_edger_q\trest_rnai_1pct_vs_ctrl_1pct_cuffdiff_log2_fc\trest_rnai_1pct_vs_ctrl_1pct_cuffdiff_q\tsymbol_from_mygene\tentrez_gene\tensembl_gene\tuniprot\r\n",
"ACSL6\t0.693035\t0.00353789\t0.780700508264282\t0.000726368003380255\t1.40130248551486\t2.03242454541503e-12\t1.35732\t0.000296959\t0.652839\t0.00368833\t0.62060197725058\t0.0319919632128644\tACSL6\t23305\tENSG00000164398\tQ9UKU0\r\n",
"BSN\t1.11246\t0.000909465\t1.09928222191661\t0.000218267636134508\t2.63005762975093\t2.17776399229072e-23\t2.63468\t0.000296959\t1.51028\t0.00368833\t1.53077540783432\t2.83144033842766e-08\tBSN\t8927\tENSG00000164061\tQ9UPA5\r\n",
"CACNA1B\t0.671965\t0.00403448\t0.747850614318651\t0.00295938479320121\t2.78808469705071\t8.261889909626e-59\t2.8776\t0.000296959\t2.1949\t0.00368833\t2.04023408273206\t2.51782105340449e-37\tCACNA1B\t774\tENSG00000148408\tQ00975\r\n",
"CDK5R2\t0.906606\t0.010604\t0.995753258104005\t0.0321245399653699\t2.74718938183856\t1.45755757590461e-22\t2.69818\t0.000296959\t1.78161\t0.00368833\t1.75143612373456\t3.84179671191274e-12\tCDK5R2\t8941\tENSG00000171450\tQ13319\r\n",
"DLGAP3\t0.752587\t0.000909465\t0.694043429172008\t0.00961456742180767\t2.1559802338877\t2.84390708477258e-30\t2.09444\t0.000296959\t1.3321\t0.00368833\t1.46193680471569\t4.78385967258599e-16\tDLGAP3\t58512\tENSG00000116544\tO95886\r\n",
"FBXO41\t1.03105\t0.000909465\t0.948953354609436\t5.45936686898597e-09\t1.58773624377356\t1.20063974195913e-26\t1.6326\t0.000296959\t0.590333\t0.00368833\t0.638782889164122\t0.000241335152834637\tFBXO41\t150726\tENSG00000163013\tQ8TF61\r\n",
"FNDC5\t0.899575\t0.000909465\t0.90613701680003\t5.38089519592874e-05\t1.72290684355273\t8.80355999214918e-22\t1.69674\t0.000296959\t0.78639\t0.00368833\t0.816769826752705\t7.9379566771923e-06\tFNDC5\t252995\tENSG00000160097\tQ8NAU1\r\n",
"FSTL4\t0.673053\t0.0131102\t0.739232032439253\t0.0323798360295508\t1.90075570009152\t6.09090914542728e-16\t1.88138\t0.000296959\t1.19687\t0.00368833\t1.16152366765227\t6.26462777571838e-07\tFSTL4\t23105\tENSG00000053108\tQ6MZW2\r\n",
"GABBR2\t0.640786\t0.00454554\t0.645720037857655\t0.00311968580882013\t1.40662139632651\t4.2552579948505e-15\t1.34725\t0.000296959\t0.69542\t0.00368833\t0.760901358468859\t0.000235124454216175\tGABBR2\t9568\tENSG00000136928\tO75899\r\n"
]
}
],
"source": [
"!head cavadas-et-al-2016-suppl-table-5-augmented.tsv"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "d076d68b",
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
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Raw
cavadas-et-al-2016-suppl-table-1-augmented.tsv
gene_id ctrl_rnai_1pct_edger_log2_fc ctrl_rnai_1pct_edger_q ctrl_rnai_1pct_cuffdiff_log2_fc ctrl_rnai_1pct_cuffdiff_q rest_rnai_1pct_edger_log2_fc rest_rnai_1pct_edger_q rest_rnai_1pct_cuffdiff_log2_fc rest_rnai_1pct_cuffdiff_q classification symbol_from_mygene entrez_gene ensembl_gene uniprot
A4GALT -0.89179743506728 0.00275890200109247 -0.819547 0.0016575 -1.33610790356489 6.08871446611368e-06 -1.25808 0.000296959 REST-independent A4GALT 53947 ENSG00000128274 Q9NPC4
AAAS -0.492303912516291 0.00218222249845472 -0.497722 0.0137838 -0.664555550052482 8.85138274611719e-06 -0.709727 0.000296959 REST-independent AAAS 8086 ENSG00000094914 Q9NRG9
AARS2 -0.638066209461669 8.97689512834134e-08 -0.57847 0.00403448 -0.477729544343378 9.8085347508508e-05 -0.424865 0.000296959 REST-independent AARS2 57505 ENSG00000124608 Q5JTZ9
AASS -0.483311801724247 0.00962232414374304 -0.507763 0.0131102 -0.40154164461703 0.0344034728764458 -0.352985 0.00497304 REST-independent AASS 10157 ENSG00000008311 Q9UDR5
ABAT -0.74223365020296 0.000294107008632734 -0.752384 0.000909465 -0.760482402214529 0.000163271568634579 -0.882883 0.000296959 REST-independent ABAT 18 ENSG00000183044 P80404
ABCB1 -0.631348924026709 0.00383435545857341 -0.677122 0.0272415 -0.708930904425979 0.000759326958845703 -0.586892 0.00394991 REST-independent ABCB1 5243 ENSG00000085563 P08183
ABCB7 -0.513114192020125 0.000261127152497182 -0.427749 0.0488779 -0.386167778243346 0.0078443090117947 -0.363605 0.00286777 REST-independent ABCB7 22 ENSG00000131269 O75027
ABCG1 -0.641967398370776 0.0209594713790881 -0.713305 0.00504662 -0.955185891688678 0.000284930168814008 -0.687127 0.000296959 REST-independent ABCG1 9619 ENSG00000160179 P45844
ABCG2 -1.10230958258891 0.000218577502020416 -1.04453 0.000909465 -1.21816303991722 3.68891548895105e-05 -1.00868 0.000296959 REST-independent ABCG2 9429 ENSG00000118777 Q9UNQ0
ABHD16A -0.681144436245293 3.39257808678001e-05 -0.574567 0.0102315 -0.593215142825791 0.000296915055318518 -0.56964 0.000296959 REST-independent ABHD16A 7920 ENSG00000231488;ENSG00000230475;ENSG00000206403;ENSG00000235676;ENSG00000236063;ENSG00000204427;ENSG00000224552 O95870
ABHD3 -0.547326503966839 0.00106356953277773 -0.534926 0.010604 -0.770333984163691 1.13470687165471e-06 -0.788584 0.000296959 REST-independent ABHD3 171586 ENSG00000158201 Q8WU67
ABHD6 -0.833017989925877 4.32628649646561e-07 -0.739179 0.0016575 -0.866323315108832 9.73474611036699e-08 -0.687293 0.000296959 REST-independent ABHD6 57406 ENSG00000163686 Q9BV23
ACAD9 -0.587785536545409 3.89674089976335e-05 -0.533239 0.0123925 -0.620210069058785 8.84211167911086e-06 -0.585031 0.000296959 REST-independent ACAD9 28976 ENSG00000177646 Q9H845
ACBD7 -0.427536839831774 0.0323798360295508 -0.458821 0.0442206 -0.549862074706682 0.00307318344280817 -0.477479 0.00124625 REST-independent ACBD7 414149 ENSG00000176244 Q8N6N7
ACTA2 -2.71617391401703 1.50742062605215e-13 -2.92293 0.0223219 -2.7049424015623 1.02425908742992e-13 -3.0509 0.000296959 REST-independent ACTA2 59 ENSG00000107796 P62736
ACTR10 -0.563731566718421 5.78307425681193e-05 -0.564897 0.00554039 -0.794237755691176 2.28227140487569e-09 -0.813767 0.000296959 REST-independent ACTR10 55860 ENSG00000131966 Q9NZ32
ACTR5 -0.536595255333746 0.00398322549550668 -0.473792 0.0340264 -0.756057773849327 1.42526777930595e-05 -0.585198 0.000296959 REST-independent ACTR5 79913 ENSG00000101442 Q9H9F9
ACYP1 -0.833841839362787 0.000216267070193527 -0.672844 0.00504662 -1.1745786832648 1.21015907052036e-07 -1.05204 0.000296959 REST-independent ACYP1 97 ENSG00000119640 P07311
ADCK1 -0.894676506429913 2.36374566903209e-05 -0.961966 0.000909465 -0.935762146382942 6.78213947525247e-06 -1.04046 0.000296959 REST-independent ADCK1 57143 ENSG00000063761 Q86TW2
ADK -0.443471685810345 0.0130181788734228 -0.505203 0.0180551 -0.546313199545419 0.00106652211393445 -0.590787 0.000296959 REST-independent ADK 132 ENSG00000156110 P55263
ADSL -0.437391712832169 0.0045403869788016 -0.438549 0.0294667 -0.469295425062696 0.00157800679601884 -0.415795 0.00124625 REST-independent ADSL 158 ENSG00000239900 P30566
ADSS -0.459379946929908 0.000284832807299152 -0.421459 0.043745 -0.342839857977177 0.00924672185570869 -0.333118 0.0092395 REST-independent ADSS2 159 ENSG00000035687 P30520
AGFG2 -0.866270261682814 0.0043212265828221 -0.952085 0.000909465 -0.694112893984838 0.0241703564673659 -0.81253 0.000296959 REST-independent AGFG2 3268 ENSG00000106351 O95081
AGL -0.635212627640454 0.015103957606515 -0.664369 0.000909465 -0.577712928737295 0.0260184061101002 -0.531468 0.000296959 REST-independent AGL 178 ENSG00000162688 P35573
AGXT2L1 -1.29551160544758 0.00732336717928455 -0.81738 0.0214127 -1.59690403965654 0.000851595216433291 -1.36085 0.0007968 REST-independent ETNPPL 64850 ENSG00000164089 Q8TBG4
AHCYL2 -0.582572657531104 0.00197695003677513 -0.542459 0.015501 -0.454179637881798 0.0186772458545235 -0.41817 0.00124625 REST-independent AHCYL2 23382 ENSG00000158467 Q96HN2
AHSA1 -0.456709093249506 0.00123721338181055 -0.413678 0.0454068 -0.398674942963144 0.00511169433810228 -0.357233 0.00546502 REST-independent AHSA1 10598 ENSG00000100591 O95433
ALDH1A2 -0.999300450071825 6.29400945803075e-11 -0.941937 0.000909465 -0.530693034296144 0.00112501845852294 -0.576916 0.000296959 REST-independent ALDH1A2 8854 ENSG00000128918 O94788
ALDH4A1 -0.83704280749419 2.52763066718712e-06 -0.86701 0.000909465 -0.682748980432558 0.000136076269580391 -0.802141 0.000296959 REST-independent ALDH4A1 8659 ENSG00000159423 P30038
ALG6 -0.828065929454969 4.26815560160651e-09 -0.74696 0.000909465 -0.840435999990088 1.5173836597155e-09 -0.789653 0.000296959 REST-independent ALG6 29929 ENSG00000088035 Q9Y672
ALG8 -0.652595202630415 1.51402624936192e-07 -0.651912 0.000909465 -0.637612030103135 2.15011094297993e-07 -0.544358 0.000296959 REST-independent ALG8 79053 ENSG00000159063 Q9BVK2
AMOT -1.00938352049897 1.2712752191008e-09 -0.970738 0.000909465 -0.710480750643213 3.90538254403539e-05 -0.67864 0.000296959 REST-independent AMOT 154796 ENSG00000126016 Q4VCS5
AMPH -0.524406186542504 0.0176420837749907 -0.562857 0.0137838 -0.629653182176476 0.00253144188787805 -0.588878 0.000296959 REST-independent AMPH 273 ENSG00000078053 P49418
ANKS1A -0.548865864580851 0.00024078994664816 -0.525763 0.0123925 -0.348618004478162 0.0306927849589411 -0.305547 0.00937453 REST-independent ANKS1A 23294 ENSG00000064999 Q92625
ANO10 -0.62106295166673 2.24081848976272e-05 -0.65942 0.00233451 -0.603150078987673 3.04636228691659e-05 -0.69412 0.000296959 REST-independent ANO10 55129 ENSG00000160746 Q9NW15
ANXA6 -0.491824300621242 0.000424683798262787 -0.459303 0.0246539 -0.322572470998064 0.0316874821894454 -0.325149 0.0121959 REST-independent ANXA6 309 ENSG00000197043 P08133
AP2A2 -0.454300081110333 0.000885742516558435 -0.489533 0.0134079 -0.479757901741762 0.000303996619646571 -0.449061 0.000296959 REST-independent AP2A2 161 ENSG00000281385;ENSG00000280759;ENSG00000183020 O94973
APEH -0.775573388202322 3.32032303183293e-07 -0.790412 0.000909465 -0.730942243514321 1.27495517161342e-06 -0.708001 0.000296959 REST-independent APEH 327 ENSG00000164062 P13798
APEX1 -0.464061339249138 0.000381446725406484 -0.426155 0.0381184 -0.640409958899611 1.43491938220114e-07 -0.608164 0.000296959 REST-independent APEX1 328 ENSG00000100823 P27695
AQR -0.59812535215741 0.00218370962834534 -0.595694 0.00296644 -0.408582148631935 0.049937052502959 -0.415553 0.00102747 REST-independent AQR 9716 ENSG00000021776 O60306
ARHGAP17 -0.513450751823085 5.01615402549075e-05 -0.467452 0.0196202 -0.32111778055139 0.0184492233544029 -0.249388 0.0432354 REST-independent ARHGAP17 55114 ENSG00000140750;ENSG00000288353 Q68EM7
ARL15 -0.613343086568037 0.0174769307941762 -0.643066 0.00403448 -0.524800749510018 0.0435968940113207 -0.665192 0.000296959 REST-independent ARL15 54622 ENSG00000185305 Q9NXU5
ARMC6 -0.610555705624712 5.71796108959861e-06 -0.643461 0.000909465 -0.598683325244512 6.64548055177179e-06 -0.632626 0.000296959 REST-independent ARMC6 93436 ENSG00000105676 Q6NXE6
ARSK -0.496910731635739 0.00811431183969754 -0.559646 0.015501 -0.643695267196791 0.000291216914759742 -0.443651 0.00394991 REST-independent ARSK 153642 ENSG00000164291 Q6UWY0
ATAD3B -0.699944446090772 6.85027327801296e-05 -0.733659 0.000909465 -0.570916281034489 0.00142377153981563 -0.569198 0.000296959 REST-independent ATAD3B 83858 ENSG00000160072 Q5T9A4
ATF6B -0.724508506459345 1.78368771404574e-06 -0.753064 0.000909465 -0.486917522500704 0.0021031974043563 -0.533855 0.000296959 REST-independent ATF6B 1388 ENSG00000234539;ENSG00000228628;ENSG00000168468;ENSG00000213676 Q99941
ATG3 -0.616641339657377 2.40532928773998e-05 -0.610927 0.00233451 -0.672838320461898 2.14500736036205e-06 -0.70818 0.000296959 REST-independent ATG3 64422 ENSG00000144848 Q9NT62
ATG4C -0.495769047280705 0.000763996425740616 -0.456315 0.0305727 -0.49669328864201 0.000587209075380739 -0.469514 0.000296959 REST-independent ATG4C 84938 ENSG00000125703 Q96DT6
ATP10D -1.149476842527 2.95109756181857e-09 -1.04058 0.000909465 -0.766473478512919 8.99460814696651e-05 -0.726321 0.000296959 REST-independent ATP10D 57205 ENSG00000145246 Q9P241
ATP5G1 -0.561238384907995 0.00212732500990541 -0.541549 0.00693636 -0.644748557298078 0.000222154981283678 -0.636467 0.000296959 REST-independent ATP5MC1 516 ENSG00000159199 P05496
ATP8B2 -0.57428053123537 1.40268386451026e-05 -0.558491 0.0231818 -0.472763898954912 0.000434827344679562 -0.391421 0.0138196 REST-independent ATP8B2 57198 ENSG00000143515 P98198
AUH -0.527861684241411 0.00739260879469574 -0.596494 0.0078661 -0.581333712437892 0.00221879821753275 -0.577314 0.000296959 REST-independent AUH 549 ENSG00000148090 Q13825
AVEN -0.905018725623485 1.3075712190389e-05 -0.998335 0.000909465 -1.14413596364295 1.94874918681775e-08 -1.2488 0.000296959 REST-independent AVEN 57099 ENSG00000169857 Q9NQS1
B4GALT3 -0.48020269448433 0.00157073735650579 -0.526862 0.00909685 -0.542788891019549 0.000197016699130484 -0.583319 0.000296959 REST-independent B4GALT3 8703 ENSG00000158850 O60512
BAG2 -0.518759897774218 0.000307399697257087 -0.442715 0.0407804 -0.513542361629604 0.000291026853710569 -0.511455 0.000296959 REST-independent BAG2 9532 ENSG00000112208 O95816
BAMBI -0.822185951869777 3.13306386114584e-05 -0.8575 0.000909465 -1.1723770196074 6.5502438455375e-10 -1.10791 0.000296959 REST-independent BAMBI 25805 ENSG00000095739 Q13145
BANP -0.636133394060792 0.000278561997468158 -0.705498 0.000909465 -0.813047332185198 1.5740075270523e-06 -0.705025 0.000296959 REST-independent BANP 54971 ENSG00000172530 Q8N9N5
BASP1 -0.757815680389699 0.0115832244376804 -0.910398 0.000909465 -0.843639149630973 0.0037132102305576 -0.990111 0.000296959 REST-independent BASP1 10409 ENSG00000176788 P80723
BBS10 -0.9029585510717 0.000325864948860417 -0.924114 0.000909465 -0.637571308881894 0.0143999042450228 -0.679371 0.000296959 REST-independent BBS10 79738 ENSG00000179941 Q8TAM1
BBS9 -1.20526368221498 1.49994615572619e-11 -1.12738 0.000909465 -1.22443767409293 4.37602544645575e-12 -1.08385 0.000296959 REST-independent BBS9 27241 ENSG00000122507 Q3SYG4
BCAS3 -0.84731694858043 2.85467804741712e-10 -0.915336 0.000909465 -0.694534504314599 2.28051679855991e-07 -0.819779 0.000296959 REST-independent BCAS3 54828 ENSG00000141376 Q9H6U6
BCS1L -0.704732850749119 1.3075712190389e-05 -0.821035 0.000909465 -0.865932105955271 2.53139350900355e-08 -0.879593 0.000296959 REST-independent BCS1L 617 ENSG00000074582 Q9Y276
BLMH -0.800051550172166 1.82340405428894e-10 -0.786557 0.000909465 -0.814297911280804 4.59878294205303e-11 -0.819934 0.000296959 REST-independent BLMH 642 ENSG00000108578 Q13867
BOP1 -0.472552257800915 0.0132377717890896 -0.448756 0.0249191 -0.532743454430224 0.00317304875178329 -0.490305 0.000296959 REST-independent BOP1 23246 ENSG00000285301;ENSG00000261236 Q14137
BPGM -0.358908925721772 0.043218099428605 -0.439795 0.0477892 -0.510577873743075 0.00145262826668418 -0.528508 0.000296959 REST-independent BPGM 669 ENSG00000172331 P07738
BTN3A2 -1.06512044773931 2.18432107290606e-09 -1.02468 0.000909465 -1.085439662379 7.33813442608568e-10 -1.06972 0.000296959 REST-independent BTN3A2 11118 ENSG00000186470 P78410
BZW2 -0.450533458974225 0.0012666126437346 -0.426235 0.0411408 -0.591920427048394 5.93859348068961e-06 -0.513863 0.000296959 REST-independent BZW2 28969 ENSG00000136261 Q9Y6E2
C10orf10 -2.06812649173587 3.14453569838657e-06 -2.07477 0.0217442 -2.74325802982746 5.16837815977454e-09 -2.34918 0.000296959 REST-independent DEPP1 11067 ENSG00000165507 Q9NTK1
C11orf54 -0.614159836454238 0.00666817832021221 -0.756604 0.000909465 -0.820617483405127 0.00012899547016056 -0.979376 0.000296959 REST-independent C11orf54 28970 ENSG00000182919 Q9H0W9
C11orf67 -0.838594276130065 0.000300328252263806 -0.702833 0.00504662 -0.901592311228108 7.41508724533153e-05 -0.800426 0.000296959 REST-independent AAMDC 28971 ENSG00000087884 Q9H7C9
C11orf73 -0.597065726514047 0.0256153845086922 -0.495182 0.0223219 -0.609262467040803 0.0182283062152981 -0.693358 0.000296959 REST-independent HIKESHI 51501 ENSG00000149196 Q53FT3
C11orf74 -0.593285905926915 0.00425357436065781 -0.53812 0.0208063 -1.03747585264334 7.47232018715911e-08 -0.942105 0.000296959 REST-independent IFTAP 119710 ENSG00000166352 Q86VG3
C14orf101 -1.00308608599879 8.07967404877944e-08 -1.07195 0.000909465 -1.21634540090117 5.01987887012688e-11 -1.06888 0.000296959 REST-independent TMEM260 54916 ENSG00000070269 Q9NX78
C14orf133 -0.609425022530433 0.00188763812171051 -0.529836 0.0167576 -0.74455781866227 7.71043218067947e-05 -0.659999 0.000296959 REST-independent VIPAS39 63894 ENSG00000151445 Q9H9C1
C14orf21 -0.962725296873885 0.000495299507399541 -0.937148 0.000909465 -0.771487022248081 0.00609431266732679 -0.709683 0.000296959 REST-independent NOP9 161424 ENSG00000196943;ENSG00000285326 Q86U38
C15orf41 -0.614358170534519 0.0128469465851462 -0.648228 0.00741738 -0.56571257398622 0.0201051632109705 -0.396274 0.0146794 REST-independent CDIN1 84529 ENSG00000186073 Q9Y2V0
C15orf58 -0.770911267830545 0.0413565817533765 -0.928103 0.00403448 -0.870798628288941 0.0157846812266118 -0.864502 0.000558687 REST-independent GDPGP1 390637 ENSG00000183208 Q6ZNW5
C16orf46 -0.816651293349074 0.0390835946409878 -0.725571 0.010604 -0.92295308187467 0.015006961749709 -0.820359 0.00124625 REST-independent C16orf46 123775 ENSG00000166455 Q6P387
C16orf62 -0.598103575101106 2.40532928773998e-05 -0.586324 0.00554039 -0.426818885408016 0.00360870116747666 -0.452366 0.000296959 REST-independent VPS35L 57020 ENSG00000103544 Q7Z3J2
C17orf56 -0.542367512268965 0.00289874699617219 -0.61071 0.00403448 -0.577356897790308 0.00109196710232208 -0.630955 0.000296959 REST-independent TEPSIN 146705 ENSG00000167302 Q96N21
C18orf54 -0.671761596308983 0.00226601296278182 -0.573141 0.0116316 -0.531748307292056 0.0173374296208792 -0.501815 0.000558687 REST-independent C18orf54 162681 ENSG00000166845 Q8IYD9
C1GALT1C1 -0.681136778527217 1.78368771404574e-06 -0.544955 0.0134079 -0.68085331861563 1.30952380955643e-06 -0.625237 0.000296959 REST-independent C1GALT1C1 29071 ENSG00000171155;ENSG00000288368 Q96EU7
C1orf112 -0.696457946441969 4.34914646597202e-05 -0.703612 0.010604 -0.511616103007649 0.00359283858811722 -0.593942 0.000296959 REST-independent C1orf112 55732 ENSG00000000460 Q9NSG2
C1orf124 -0.52586210967483 0.00354462760284717 -0.558376 0.00403448 -0.446335552426014 0.0143978433990478 -0.495342 0.000296959 REST-independent SPRTN 83932 ENSG00000010072 Q9H040
C1orf31 -0.533766912108432 0.00393052975436945 -0.5151 0.0151289 -0.720286944037899 2.9343665520409e-05 -0.686219 0.000296959 REST-independent COA6 388753 ENSG00000168275 Q5JTJ3
C1QTNF1 -0.790632531954421 0.0115644127559182 -0.876963 0.000909465 -0.932802469136529 0.00206250402865443 -1.08276 0.000296959 REST-independent C1QTNF1 114897 ENSG00000173918 Q9BXJ1
C2orf56 -0.613208624757532 0.00276987943579922 -0.543124 0.0144228 -0.479779657215657 0.022222943415542 -0.455382 0.00102747 REST-independent NDUFAF7 55471 ENSG00000003509 Q7L592
C3orf26 -0.535145951962557 0.000591968023919666 -0.450784 0.0373983 -0.588552148029958 9.47615157913354e-05 -0.535113 0.000296959 REST-independent CMSS1 84319 ENSG00000184220 Q9BQ75
C4orf33 -0.537082916961573 0.00192119413146883 -0.496861 0.0365931 -0.609674732085461 0.00026421958591654 -0.615977 0.000296959 REST-independent C4orf33 132321 ENSG00000151470 Q8N1A6
C9orf100 -0.522873009084567 0.000215968822234086 -0.551067 0.010604 -0.827807413744592 3.62205758001709e-10 -0.786971 0.000296959 REST-independent ARHGEF39 84904 ENSG00000137135 Q8N4T4
C9orf123 -0.597042496428287 3.79478678245295e-05 -0.50247 0.0208063 -0.680786793416622 1.33370402204755e-06 -0.710991 0.000296959 REST-independent DMAC1 90871 ENSG00000137038 Q96GE9
C9orf3 -0.64285382660777 0.00316293083485618 -0.604858 0.0127682 -0.755941435020982 0.000334857403907674 -0.552301 0.00167134 REST-independent AOPEP 84909 ENSG00000148120 Q8N6M6
C9orf7 -0.547535181109396 0.0382401378755699 -0.57687 0.0131102 -0.612690410777548 0.0142821134046046 -0.702329 0.000296959 REST-independent CACFD1 11094 ENSG00000160325;ENSG00000280479 Q9UGQ2
C9orf95 -0.731052530967681 0.000991418700044426 -0.877476 0.000909465 -1.04332776768546 1.2510866619804e-06 -0.971094 0.000296959 REST-independent NMRK1 54981 ENSG00000106733 Q9NWW6
CA2 -1.0079962070104 4.35486849067035e-25 -0.993316 0.000909465 -1.28426069346714 8.77912153302012e-41 -1.25892 0.000296959 REST-independent CA2 760 ENSG00000104267 P00918
CADPS2 -1.08144141596118 3.29954278881428e-07 -1.10815 0.000909465 -0.747033099923641 0.000578446749843347 -0.75181 0.000296959 REST-independent CADPS2 93664 ENSG00000081803 Q86UW7
CAMK2D -0.47844553564109 0.029521592364626 -0.610262 0.0183472 -0.517124780232276 0.0133912785207589 -0.617284 0.000296959 REST-independent CAMK2D 817 ENSG00000145349 Q13557
CAMKMT -0.811082166513347 0.000370529913718943 -0.817838 0.000909465 -0.843470380419557 0.000162076098184894 -0.897584 0.000296959 REST-independent CAMKMT 79823 ENSG00000143919 Q7Z624
CAND2 -0.531024141113679 0.000339848711711148 -0.528089 0.0109013 -0.475581172604712 0.00136287222846794 -0.390454 0.0018777 REST-independent CAND2 23066 ENSG00000144712 O75155
CARD10 -0.484333974325158 0.00363663037539199 -0.553084 0.0109013 -0.453422873659449 0.00593804165332703 -0.323489 0.0165523 REST-independent CARD10 29775 ENSG00000100065 Q9BWT7
CCBL1 -0.82541686428603 8.90429422349417e-05 -0.797248 0.000909465 -0.530111809237049 0.0150255878762204 -0.446995 0.0048145 REST-independent KYAT1 883 ENSG00000286112;ENSG00000171097 Q16773
CCDC132 -0.675704226359129 0.000332374250245939 -0.674956 0.00824627 -0.654383399320553 0.00043337943010763 -0.670096 0.000296959 REST-independent VPS50 55610 ENSG00000004766 Q96JG6
CCDC22 -0.706413292420448 0.000100790591579307 -0.654721 0.00233451 -0.781905897356979 9.19952596481094e-06 -0.773865 0.000296959 REST-independent CCDC22 28952 ENSG00000101997 O60826
CCDC61 -1.38141497786529 0.00261264412439089 -1.31826 0.000909465 -0.968079636640644 0.0376535677437026 -0.931486 0.000296959 REST-independent CCDC61 729440 ENSG00000104983 Q9Y6R9
CCDC71 -0.806352427125811 7.39214446116265e-06 -0.701997 0.0016575 -0.689689143383997 0.000130805133264344 -0.605517 0.000296959 REST-independent CCDC71 64925 ENSG00000177352 Q8IV32
CCDC76 -0.838398698793408 1.98701424453281e-05 -1.10281 0.000909465 -0.937413355079943 9.93768679623766e-07 -0.949568 0.000296959 REST-independent TRMT13 54482 ENSG00000122435 Q9NUP7
CCDC86 -0.559504424222059 7.69931584806057e-05 -0.551258 0.00648843 -0.619347983555692 6.08871446611368e-06 -0.598249 0.000296959 REST-independent CCDC86 79080 ENSG00000110104 Q9H6F5
CCNG1 -0.448288351589103 0.000171565889533256 -0.450288 0.0294667 -0.416340701379806 0.000458474052747966 -0.405097 0.00146148 REST-independent CCNG1 900 ENSG00000113328 P51959
CCT4 -0.708662815882771 3.0291503326183e-10 -0.687863 0.000909465 -0.835512947235261 1.86201886510937e-14 -0.816035 0.000296959 REST-independent CCT4 10575 ENSG00000115484 P50991
CCT6A -0.420200721529297 4.87033567819e-05 -0.410655 0.0464192 -0.475310624309655 1.80522629896857e-06 -0.464212 0.000296959 REST-independent CCT6A 908 ENSG00000146731 P40227
CDC14A -0.505242291526069 0.0479198205824732 -0.679871 0.00353789 -0.652968344908187 0.00577492023187196 -0.493894 0.00529474 REST-independent CDC14A 8556 ENSG00000079335 Q9UNH5
CDC14B -0.641298828504863 0.000316089278201151 -0.579261 0.00454554 -0.454766375019554 0.015006961749709 -0.407359 0.000296959 REST-independent CDC14B 8555 ENSG00000081377 O60729
CDIPT -0.528564921818878 0.0017137603282374 -0.446782 0.0311667 -0.57069064160093 0.000444305579537248 -0.501812 0.000296959 REST-independent CDIPT 10423 ENSG00000103502 O14735
CDK16 -0.440717063957267 0.00015471159599232 -0.425684 0.0357746 -0.355588642434536 0.00287474007936151 -0.364544 0.00514422 REST-independent CDK16 5127 ENSG00000102225 Q00536
CDK5 -0.578629621243005 0.0139077680708218 -0.527991 0.0120196 -0.760293373224109 0.000468546902323548 -0.74413 0.000296959 REST-independent CDK5 1020 ENSG00000164885 Q00535
CDKAL1 -0.535544035678653 0.0014447699540175 -0.526748 0.0202134 -0.57517056010774 0.000435429103676477 -0.610411 0.000296959 REST-independent CDKAL1 54901 ENSG00000145996 Q5VV42
CENPJ -0.521856503495041 0.00242337988591096 -0.483533 0.0243862 -0.429696643884771 0.013925824422946 -0.390697 0.0018777 REST-independent CENPJ 55835 ENSG00000151849 Q9HC77
CENPM -0.55846229311115 0.0074739060591719 -0.609986 0.00454554 -0.741634058157791 0.000140244034224289 -0.805414 0.000296959 REST-independent CENPM 79019 ENSG00000100162 Q9NSP4
CEP41 -1.09131714324042 5.33163193229672e-10 -0.973921 0.000909465 -1.03314350066072 2.80026892996264e-09 -1.06398 0.000296959 REST-independent CEP41 95681 ENSG00000106477 Q9BYV8
CEPT1 -1.03069742083443 1.71612188999879e-14 -0.895714 0.000909465 -0.979145600162744 1.91588800018312e-13 -0.892718 0.000296959 REST-independent CEPT1 10390 ENSG00000134255 Q9Y6K0
CFDP1 -1.07167503340697 3.05896159958905e-12 -1.01645 0.000909465 -1.25340665585777 8.98337615219932e-17 -1.222 0.000296959 REST-independent CFDP1 10428 ENSG00000153774 Q9UEE9
CGN -0.521089473817099 0.000721445141786815 -0.522313 0.0137838 -0.426585621456516 0.00639379276719132 -0.347279 0.00497304 REST-independent CGN 57530 ENSG00000143375 Q9P2M7
CHCHD1 -0.49808024936206 0.0104906699438254 -0.448721 0.0493437 -0.57213623377663 0.00197953203701956 -0.572204 0.000296959 REST-independent CHCHD1 118487 ENSG00000172586 Q96BP2
CHCHD10 -0.52149230604651 0.00749899350182811 -0.524625 0.0102315 -0.583769330763312 0.00167339432925795 -0.598036 0.000296959 REST-independent CHCHD10 400916 ENSG00000273607;ENSG00000250479 Q8WYQ3
CHEK2 -0.514006343310769 0.00138322653609038 -0.494648 0.0199429 -0.483010627944044 0.00242270242496456 -0.442502 0.000558687 REST-independent CHEK2 11200 ENSG00000183765 O96017
CHID1 -0.543000917840655 0.00211011497892236 -0.491397 0.0225537 -0.59103489363544 0.000517468106901838 -0.65942 0.000296959 REST-independent CHID1 66005 ENSG00000177830 Q9BWS9
CHMP4A -0.620082056919716 0.00410876724050447 -0.686375 0.0016575 -0.769771097700289 0.000178459834774664 -0.740738 0.000296959 REST-independent CHMP4A 29082 ENSG00000285302;ENSG00000254505 Q9BY43
CHN2 -0.980116271927166 0.000310393692016767 -0.836769 0.000909465 -0.880660594025957 0.0010707457870225 -0.861014 0.000296959 REST-independent CHN2 1124 ENSG00000285162;ENSG00000106069 P52757
CHORDC1 -0.911321770347024 5.33499735022435e-10 -0.87003 0.000909465 -0.907638699308038 3.97467550806182e-10 -0.905185 0.000296959 REST-independent CHORDC1 26973 ENSG00000110172;ENSG00000285023 Q9UHD1
CHP -0.524231166314952 8.29257640271708e-05 -0.445929 0.0376333 -0.529820398230192 5.21698570647219e-05 -0.484109 0.000296959 REST-independent RHOV;CHP1 171177;11261 ENSG00000104140;ENSG00000187446 Q96L33;Q99653
CHST11 -0.896831884406634 5.67540856573261e-05 -0.843968 0.000909465 -0.925042939681249 2.30529385282696e-05 -0.874528 0.000296959 REST-independent CHST11 50515 ENSG00000171310 Q9NPF2
CHST2 -1.19495104260288 4.19914802095601e-12 -1.05637 0.000909465 -1.09069366843281 1.51631022236775e-10 -1.03733 0.000296959 REST-independent CHST2 9435 ENSG00000175040 Q9Y4C5
CHTF8 -0.57009784774589 2.80749298920881e-06 -0.517078 0.0134079 -0.590225924550677 7.60082623020995e-07 -0.489421 0.000296959 REST-independent CHTF8 54921 ENSG00000168802 P0CG13
CILP2 -0.623138061354843 1.3075712190389e-05 -0.525023 0.0160124 -0.462553604253163 0.00161420831411504 -0.35569 0.00448649 REST-independent CILP2 148113 ENSG00000160161 Q8IUL8
CINP -0.535285376768173 0.0232634154615069 -0.531604 0.0163917 -0.756132443935718 0.000440184952537544 -0.691504 0.000296959 REST-independent CINP 51550 ENSG00000100865 Q9BW66
CLIC1 -0.419859431482075 0.033257466900299 -0.459648 0.0260877 -0.61995627165162 0.000419374477457065 -0.583525 0.000296959 REST-independent CLIC1 1192 ENSG00000226417;ENSG00000206394;ENSG00000223639;ENSG00000226248;ENSG00000230685;ENSG00000226651;ENSG00000213719 O00299
CLK2 -0.579301695850035 0.000301936299357934 -0.49304 0.0186819 -0.711939771950379 3.24293673311473e-06 -0.674438 0.000296959 REST-independent CLK2 1196 ENSG00000261893;ENSG00000176444 P49760
CLPB -0.540912957335235 0.000580935869619313 -0.541586 0.00741738 -0.55423736250778 0.000314280154254154 -0.522296 0.000296959 REST-independent CLPB 81570 ENSG00000162129 Q9H078
CMTM8 -0.555449052265906 0.00280643777005485 -0.539906 0.0147234 -0.672401472839357 0.000159628858314405 -0.578069 0.000296959 REST-independent CMTM8 152189 ENSG00000170293 Q8IZV2
CNNM2 -0.651777760635251 0.00325437073370407 -0.545506 0.0285901 -0.601260172087744 0.00615838338335547 -0.422313 0.00937453 REST-independent CNNM2 54805 ENSG00000148842 Q9H8M5
CNTN1 -0.697829609166867 0.00310828473665079 -0.725974 0.0016575 -0.763216737342594 0.000814956347803156 -0.653476 0.000296959 REST-independent CNTN1 1272 ENSG00000018236 Q12860
CNTNAP2 -0.777913525562941 1.71460868551433e-05 -0.719761 0.000909465 -0.63993360339763 0.000477640208763237 -0.656909 0.000296959 REST-independent CNTNAP2 26047 ENSG00000278728;ENSG00000174469 Q9UHC6
COG4 -0.634029646411104 2.03068736251193e-06 -0.602221 0.00454554 -0.545596666573388 4.87729957835806e-05 -0.574441 0.000296959 REST-independent COG4 25839 ENSG00000103051 Q9H9E3
COL2A1 -0.666354015994532 0.00477799598548006 -0.662402 0.006 -0.685900659150979 0.00290214116435752 -0.813875 0.000296959 REST-independent COL2A1 1280 ENSG00000139219 P02458
COL4A6 -0.494988051692428 0.00784405754012939 -0.580575 0.00909685 -0.609446498003137 0.00054409503822192 -0.58001 0.000296959 REST-independent COL4A6 1288 ENSG00000197565 Q14031
COLEC12 -1.0723965717496 1.34140425583976e-14 -0.965308 0.000909465 -0.680223789075323 1.21248753169701e-06 -0.723363 0.000296959 REST-independent COLEC12 81035 ENSG00000158270 Q5KU26
COMMD10 -1.08042888614734 5.35915967767549e-07 -1.09787 0.000909465 -0.834650737673843 9.63581474464494e-05 -0.842938 0.000296959 REST-independent COMMD10 51397 ENSG00000145781 Q9Y6G5
COPS4 -0.50853028447348 0.000570729175086046 -0.48346 0.0214127 -0.479618407242178 0.00105927459885299 -0.458719 0.000296959 REST-independent COPS4 51138 ENSG00000138663 Q9BT78
COPS5 -0.662674989388158 1.34702716743608e-06 -0.618244 0.0016575 -0.696585119560365 2.15986749205399e-07 -0.646397 0.000296959 REST-independent COPS5 10987 ENSG00000121022 Q92905
COQ3 -0.625854386438806 0.000166759650303713 -0.464085 0.0348058 -0.610982613073565 0.000198874245990774 -0.540725 0.000296959 REST-independent COQ3 51805 ENSG00000132423 Q9NZJ6
CORO1B -0.91335076920745 3.85309655092113e-09 -0.838427 0.000909465 -0.932631162225901 1.062834422752e-09 -0.97204 0.000296959 REST-independent CORO1B 57175 ENSG00000172725 Q9BR76
CPS1 -1.0329656640967 8.42015123404477e-11 -1.01262 0.000909465 -0.818731689980347 3.04312661520349e-07 -0.744313 0.000296959 REST-independent CPS1 1373 ENSG00000021826 P31327
CPSF3 -0.500151951522623 6.49882878798699e-05 -0.421602 0.043745 -0.516311566369888 2.52142832175372e-05 -0.442765 0.000296959 REST-independent CPSF3 51692 ENSG00000119203 Q9UKF6
CR2 -1.30940855460669 0.00128983310110114 -1.27318 0.000909465 -1.24915306997345 0.00185893857318621 -1.17684 0.000296959 REST-independent CR2 1380 ENSG00000117322 P20023
CREB5 -0.561950663083785 0.0323798360295508 -0.585631 0.00504662 -0.578954970810305 0.0219897171185828 -0.596503 0.000296959 REST-independent CREB5 9586 ENSG00000146592 Q02930
CRIPT -1.10883371773458 5.93672562866909e-10 -0.942436 0.000909465 -1.05275119702164 2.78683502375687e-09 -0.913393 0.000296959 REST-independent CRIPT 9419 ENSG00000119878 Q9P021
CSE1L -0.473103174191804 1.36749143716812e-05 -0.466463 0.0220606 -0.25459594679998 0.0370347109782159 -0.265582 0.0449126 REST-independent CSE1L 1434 ENSG00000124207 P55060
CSTB -0.424366591832963 0.0126684791388874 -0.41536 0.0495757 -0.644974669389835 2.48159314970774e-05 -0.639537 0.000296959 REST-independent CSTB 1476 ENSG00000160213 P04080
CSTF2T -0.67115087427085 5.154518630663e-05 -0.63276 0.0192947 -0.518776617229582 0.00222820345492969 -0.550045 0.0007968 REST-independent CSTF2T 23283 ENSG00000177613 Q9H0L4
CTR9 -0.488460727360196 0.000279128831968243 -0.498572 0.0112456 -0.405741382555537 0.00301029489483733 -0.393532 0.00146148 REST-independent CTR9 9646 ENSG00000198730 Q6PD62
CTTNBP2NL -0.603539835411118 0.0025459813792181 -0.554449 0.010604 -0.674525824273594 0.000458474052747966 -0.541123 0.000296959 REST-independent CTTNBP2NL 55917 ENSG00000143079 Q9P2B4
CXXC1 -0.597881046554977 9.50757812813065e-05 -0.565736 0.00403448 -0.648280003893381 1.3372683868568e-05 -0.592064 0.000296959 REST-independent CXXC1 30827 ENSG00000154832 Q9P0U4
CYP26A1 -1.15054016855381 2.55536076734581e-05 -0.820879 0.0016575 -0.624876757143911 0.0244175813065029 -0.666101 0.000296959 REST-independent CYP26A1 1592 ENSG00000095596 O43174
CYP2J2 -0.949975579076131 0.00687873785088763 -0.767816 0.00353789 -0.85277216280798 0.0137265578694908 -0.813257 0.000296959 REST-independent CYP2J2 1573 ENSG00000134716 P51589
CYP2S1 -1.30896331874232 0.000798410254736441 -1.05671 0.000909465 -1.25155738473361 0.00113397049011171 -1.15008 0.000296959 REST-independent CYP2S1 29785 ENSG00000167600 Q96SQ9
CYP39A1 -0.925624340131128 0.00246923756353338 -0.84103 0.000909465 -1.18781833954769 6.05973833059574e-05 -1.08327 0.000296959 REST-independent CYP39A1 51302 ENSG00000146233 Q9NYL5
DACH1 -0.936344668102003 0.000314103389281238 -0.816865 0.000909465 -0.75299421049266 0.00453355263424402 -0.73724 0.000296959 REST-independent DACH1 1602 ENSG00000276644 Q9UI36
DANCR -0.514365472939289 0.00116654591248406 -0.46324 0.0223219 -0.678629548508273 4.80523820615765e-06 -0.635279 0.000296959 REST-independent DANCR 57291 ENSG00000226950
DAPK1 -0.557615407703518 0.000740301500305247 -0.419719 0.0480479 -0.379818616094563 0.0306927849589411 -0.353426 0.00394991 REST-independent DAPK1 1612 ENSG00000196730 P53355
DARS2 -0.661277077378638 1.62259592388829e-06 -0.633205 0.000909465 -0.586002954987331 2.30386565946368e-05 -0.559769 0.000296959 REST-independent DARS2 55157 ENSG00000117593 Q6PI48
DBT -0.564592078976111 0.0193871808653783 -0.632318 0.000909465 -0.644180971800522 0.00473272659043286 -0.617686 0.000296959 REST-independent DBT 1629 ENSG00000137992 P11182
DCAF11 -0.635530928254678 3.38217633282812e-05 -0.630499 0.000909465 -0.598296932340138 8.70139440501342e-05 -0.585843 0.000296959 REST-independent DCAF11 80344 ENSG00000100897;ENSG00000284796 Q8TEB1
DCAF13 -0.644360541179389 2.50064010474177e-07 -0.602378 0.0327321 -0.769223834702795 2.06526002998386e-10 -0.675152 0.000296959 REST-independent DCAF13 25879 ENSG00000164934 Q9NV06
DDX49 -0.472939073515984 0.0110650017547621 -0.432067 0.0411408 -0.591541342537577 0.000650267773285701 -0.4757 0.000296959 REST-independent DDX49 54555 ENSG00000105671 Q9Y6V7
DEPDC7 -0.671833322826058 0.000884208114052384 -0.637452 0.0016575 -0.755793909853835 0.00011568582083143 -0.594049 0.000296959 REST-independent DEPDC7 91614 ENSG00000121690 Q96QD5
DFFA -0.458727000687709 0.0024435729605574 -0.454946 0.0332019 -0.408719169893665 0.00700616903135835 -0.37087 0.00529474 REST-independent DFFA 1676 ENSG00000160049 O00273
DFNB31 -0.609051132781074 0.000460838006082213 -0.58719 0.00454554 -0.493330550525575 0.00522794377812622 -0.452845 0.00102747 REST-independent WHRN 25861 ENSG00000095397 Q9P202
DHFRL1 -0.750998882519224 0.000464860392557846 -0.87352 0.0214127 -0.524214579036045 0.0168190399551266 -0.544431 0.0129935 REST-independent DHFR2 200895 ENSG00000178700 Q86XF0
DHX34 -0.730579718464854 4.26815560160651e-09 -0.743455 0.000909465 -0.714036432189652 6.57349919812809e-09 -0.751041 0.000296959 REST-independent DHX34 9704 ENSG00000134815 Q14147
DHX9 -0.48992381173317 2.97606516695011e-05 -0.471945 0.0183472 -0.485339277807197 2.64626854391571e-05 -0.451867 0.000558687 REST-independent DHX9 1660 ENSG00000135829 Q08211
DIEXF -0.538873991750269 0.00367644694561996 -0.495361 0.0157545 -0.414427982552758 0.0312913094147947 -0.356438 0.00228414 REST-independent UTP25 27042 ENSG00000117597 Q68CQ4
DLG1 -0.813730400248329 0.000180284022844436 -0.799901 0.000909465 -0.649844810076382 0.00341000911699152 -0.594313 0.000296959 REST-independent DLG1 1739 ENSG00000075711 Q12959
DNAJC12 -0.543045899784002 0.0270939164312258 -0.637052 0.00554039 -0.932507781653944 2.3294130404897e-05 -0.827149 0.000296959 REST-independent DNAJC12 56521 ENSG00000108176 Q9UKB3
DPAGT1 -1.05964178242937 2.88988491063716e-15 -1.08533 0.000909465 -0.926642663144091 3.01347079556024e-12 -0.935128 0.000296959 REST-independent DPAGT1 1798 ENSG00000172269 Q9H3H5
DPM2 -0.516972076202213 0.0087965106087106 -0.44652 0.0411408 -0.768757939877381 1.89215616309822e-05 -0.672832 0.000296959 REST-independent DPM2 8818 ENSG00000136908 O94777
DSCC1 -0.813471275337872 5.26802095985662e-10 -0.740776 0.000909465 -0.600672923253999 6.65399775743878e-06 -0.525551 0.000296959 REST-independent DSCC1 79075 ENSG00000136982 Q9BVC3
DYNC1I2 -0.650985654519596 6.13783595891742e-07 -0.632553 0.000909465 -0.619828857332813 1.70885243890351e-06 -0.618221 0.000296959 REST-independent DYNC1I2 1781 ENSG00000077380 Q13409
EDEM3 -0.674538072241093 0.0204809933555332 -0.714701 0.000909465 -0.614783256764935 0.033406296175268 -0.587532 0.000296959 REST-independent EDEM3 80267 ENSG00000116406 Q9BZQ6
EDIL3 -1.47395614366219 1.01500350203896e-05 -1.21215 0.000909465 -1.12586425169482 0.00051500392340608 -1.07321 0.000296959 REST-independent EDIL3 10085 ENSG00000164176 O43854
EED -0.412311116875198 0.0146307147257545 -0.45739 0.0341929 -0.47970102550781 0.00263443770006866 -0.442811 0.0007968 REST-independent EED 8726 ENSG00000074266 O75530
EEFSEC -0.810579577893466 7.55834209616987e-07 -0.77269 0.000909465 -0.882001292859072 3.81921466833006e-08 -0.865358 0.000296959 REST-independent EEFSEC 60678 ENSG00000132394;ENSG00000284869 P57772
EFEMP1 -0.734455081640809 0.0145222538090864 -0.786128 0.0016575 -0.835698982109158 0.00379850951719477 -0.963991 0.000296959 REST-independent EFEMP1 2202 ENSG00000115380 Q12805
EGR1 -1.86729407829945 2.53873429046703e-20 -1.88892 0.000909465 -1.91050449365041 1.81855734176545e-21 -2.05182 0.000296959 REST-independent EGR1 1958 ENSG00000120738 P18146
EGR3 -1.24496878474629 0.00245074387868721 -1.21823 0.000909465 -0.927064608825276 0.0226304252544464 -0.863085 0.00124625 REST-independent EGR3 1960 ENSG00000179388 Q06889
EHMT1 -0.561953459121922 1.98575332833073e-05 -0.511506 0.0109013 -0.310270885624915 0.0329061328569479 -0.335976 0.00394991 REST-independent EHMT1 79813 ENSG00000181090 Q9H9B1
EHMT2 -0.850309498883789 7.94939482432293e-13 -0.823285 0.000909465 -0.819321821418027 3.18461691815364e-12 -0.736544 0.000296959 REST-independent EHMT2 10919 ENSG00000236759;ENSG00000224143;ENSG00000227333;ENSG00000232045;ENSG00000206376;ENSG00000204371;ENSG00000238134 Q96KQ7
EIF2B1 -0.508280258674463 0.000124379519123464 -0.425026 0.043557 -0.48566049850847 0.000219607672300155 -0.453936 0.000296959 REST-independent EIF2B1 1967 ENSG00000111361 Q14232
EIF2B3 -0.625832177366988 7.46488836381507e-05 -0.651893 0.00233451 -0.791108781647896 1.54506206342881e-07 -0.744215 0.000296959 REST-independent EIF2B3 8891 ENSG00000070785 Q9NR50
EIF2B4 -0.476766149879766 0.00747222568083138 -0.478285 0.0297133 -0.731043906282732 6.58928418043001e-06 -0.658646 0.000296959 REST-independent EIF2B4 8890 ENSG00000115211 Q9UI10
EIF3G -0.568513586280715 0.00224624769149624 -0.574595 0.0411408 -0.688034735289513 9.21837709776599e-05 -0.672757 0.000296959 REST-independent EIF3G 8666 ENSG00000130811 O75821
EIF4A2 -0.956042069227209 1.15088557337993e-17 -0.989867 0.000909465 -1.00267410110512 1.01591907451073e-19 -1.05462 0.000296959 REST-independent EIF4A2 1974 ENSG00000156976 Q14240
ELAC1 -1.02974096959831 0.000807885376698225 -0.893675 0.000909465 -0.757818222642732 0.0137999323083241 -0.626236 0.00394991 REST-independent ELAC1 55520 ENSG00000141642 Q9H777
ELMOD1 -0.817606278404236 0.000157409345215279 -0.875324 0.000909465 -0.772160978015332 0.000308458847064768 -0.838118 0.000296959 REST-independent ELMOD1 55531 ENSG00000110675 Q8N336
ELOVL6 -0.756240283199823 1.24634203876552e-06 -0.734317 0.000909465 -0.985293786544826 5.53776943951314e-11 -0.959095 0.000296959 REST-independent ELOVL6 79071 ENSG00000170522 Q9H5J4
ELP4 -1.25204982813962 9.45455492579039e-15 -1.2335 0.000909465 -1.48033522894477 5.45047770915532e-20 -1.30019 0.000296959 REST-independent ELP4 26610 ENSG00000109911 Q96EB1
ENDOD1 -0.847428597940194 5.33996162532893e-07 -0.954636 0.000909465 -1.0193404509821 8.08913500668491e-10 -1.05223 0.000296959 REST-independent ENDOD1 23052 ENSG00000149218 O94919
EOMES -0.863568431371888 0.00199284973829956 -0.66135 0.0102315 -0.868230938288269 0.00152528606044456 -0.754399 0.000296959 REST-independent EOMES 8320 ENSG00000163508 O95936
ESCO2 -0.873677357605083 3.21370058242906e-05 -0.731348 0.000909465 -0.573046419374804 0.00936679113830055 -0.512503 0.000296959 REST-independent ESCO2 157570 ENSG00000171320 Q56NI9
ETFDH -0.685294130823286 2.64296861241024e-06 -0.743451 0.000909465 -0.620426696214482 1.99826793871033e-05 -0.608159 0.000296959 REST-independent ETFDH 2110 ENSG00000171503 Q16134
EXOC4 -0.939701746544145 2.77677079457274e-09 -0.933758 0.000909465 -0.905347119978059 7.42529591478125e-09 -0.825965 0.000296959 REST-independent EXOC4 60412 ENSG00000131558 Q96A65
EXOSC5 -0.5187993075985 0.0286368074910183 -0.55902 0.0109013 -0.531978217287003 0.019707010197594 -0.531604 0.000296959 REST-independent EXOSC5 56915 ENSG00000077348 Q9NQT4
EXOSC7 -0.556066356424965 0.00311968580882013 -0.53106 0.0127682 -0.648300701489529 0.000307087065600836 -0.636507 0.000296959 REST-independent EXOSC7 23016 ENSG00000075914 Q15024
EYA3 -0.774160722873457 5.33996162532893e-07 -0.776565 0.000909465 -0.616567802787384 9.04611961433013e-05 -0.583887 0.000296959 REST-independent EYA3 2140 ENSG00000158161 Q99504
EYA4 -0.741610189091543 0.000675276646916895 -0.716188 0.000909465 -0.603551486196776 0.00650589359959853 -0.547753 0.000296959 REST-independent EYA4 2070 ENSG00000112319 O95677
FAF1 -0.517933197340991 6.18448923351556e-05 -0.544161 0.00824627 -0.576294911752668 4.15002535741014e-06 -0.610259 0.000296959 REST-independent FAF1 11124 ENSG00000185104 Q9UNN5
FAH -0.528648247981452 0.010862017383897 -0.49424 0.0174474 -0.553499357858326 0.00568640800264951 -0.573603 0.000296959 REST-independent FAH 2184 ENSG00000103876 P16930
FAM125A -1.02220769005068 5.10913904424136e-08 -0.947698 0.000909465 -1.07728932013967 5.16837815977454e-09 -0.992398 0.000296959 REST-independent MVB12A 93343 ENSG00000141971 Q96EY5
FAM149B1 -0.740338208965256 0.000160686374655997 -0.552318 0.0228487 -0.625860332723637 0.00144858684348344 -0.433323 0.00660227 REST-independent FAM149B1 317662 ENSG00000138286 Q96BN6
FAM5C -1.79977390428048 1.00404398253713e-06 -1.37875 0.000909465 -1.22744571953647 0.000477640208763237 -1.30195 0.000296959 REST-independent BRINP3 339479 ENSG00000162670 Q76B58
FAM72B -0.88943101270483 0.00197833038146086 -0.779041 0.000909465 -1.03152516196886 0.000250502414458094 -0.726408 0.000296959 REST-independent FAM72B 653820 ENSG00000188610 Q86X60
FAM81A -1.22023910055061 3.4055156732049e-10 -1.09706 0.000909465 -1.10863081293841 6.13058168264687e-09 -1.17275 0.000296959 REST-independent FAM81A 145773 ENSG00000157470 Q8TBF8
FAM82A2 -0.571094969736301 0.000880577862117221 -0.506243 0.0183472 -0.56656796804787 0.000782190756780616 -0.568314 0.000296959 REST-independent RMDN3 55177 ENSG00000137824 Q96TC7
FAM84B -0.715237481962229 3.79895195942831e-08 -0.762662 0.000909465 -0.44247149761217 0.00144553752687284 -0.448969 0.000296959 REST-independent LRATD2 157638 ENSG00000168672 Q96KN1
FAM98A -0.580831567539288 2.34154914803635e-06 -0.567688 0.00648843 -0.44912836649392 0.000377978481845594 -0.445918 0.000296959 REST-independent FAM98A 25940 ENSG00000119812 Q8NCA5
FARS2 -0.947837237866284 0.00219896336978421 -1.00508 0.000909465 -0.853443124222526 0.0053690707426663 -0.971666 0.000296959 REST-independent FARS2 10667 ENSG00000145982 O95363
FASTKD1 -0.72011958406766 4.30328530363306e-07 -0.734871 0.000909465 -0.623153443486239 1.28174100844763e-05 -0.544069 0.000296959 REST-independent FASTKD1 79675 ENSG00000138399 Q53R41
FASTKD2 -0.684145586709969 1.5415144573997e-07 -0.63004 0.00296644 -0.498098617245027 0.000202639471469609 -0.495117 0.000296959 REST-independent FASTKD2 22868 ENSG00000118246 Q9NYY8
FBXL18 -0.742643041262598 1.94565354390109e-07 -0.677307 0.000909465 -0.81840760620936 4.63615260398435e-09 -0.763379 0.000296959 REST-independent FBXL18 80028 ENSG00000155034 Q96ME1
FBXO3 -0.696306199361793 7.64444334794543e-05 -0.614104 0.00554039 -0.582015017477977 0.00109196710232208 -0.525298 0.000296959 REST-independent FBXO3 26273 ENSG00000110429 Q9UK99
FDXACB1 -0.960714869943539 0.000143439722674206 -0.852215 0.0341929 -0.697659918962622 0.00629778625682292 -0.677495 0.0092395 REST-independent FDXACB1 91893 ENSG00000255561 Q9BRP7
FERMT2 -0.383075859238123 0.0204319981218928 -0.437353 0.0466386 -0.369303175705897 0.0224183110903297 -0.33504 0.0123244 REST-independent FERMT2 10979 ENSG00000073712 Q96AC1
FGD6 -1.02308012311466 0.00200394174111882 -0.956632 0.000909465 -1.01131795680544 0.00184224683704181 -0.906479 0.000296959 REST-independent FGD6 55785 ENSG00000180263 Q6ZV73
FGFR2 -0.712732793454822 3.99955165336056e-05 -0.514264 0.0160124 -0.564351807155404 0.00142539259945309 -0.477987 0.000296959 REST-independent FGFR2 2263 ENSG00000066468 P21802
FIG4 -0.621330620319354 0.000218577502020416 -0.641981 0.000909465 -0.760288265097437 2.32040770729309e-06 -0.655957 0.000296959 REST-independent FIG4 9896 ENSG00000112367 Q92562
FLAD1 -0.548486521728714 0.00336098358281131 -0.583668 0.00454554 -0.475160741785432 0.0114372445478822 -0.53893 0.000296959 REST-independent FLAD1 80308 ENSG00000160688 Q8NFF5
FLOT1 -0.433482208537978 0.026749175912743 -0.434277 0.0426125 -0.513144012521888 0.00499052696117027 -0.573164 0.000296959 REST-independent FLOT1 10211 ENSG00000232280;ENSG00000206379;ENSG00000236271;ENSG00000206480;ENSG00000230143;ENSG00000137312;ENSG00000224740;ENSG00000223654 O75955
FOSB -1.07932475242825 2.85594163622344e-06 -0.778214 0.000909465 -0.805996224762337 0.000504141015333741 -0.642003 0.000296959 REST-independent FOSB 2354 ENSG00000125740 P53539
FOXC1 -0.777680515712977 8.89181593411849e-12 -0.768005 0.000909465 -0.758867747123319 1.69190265908814e-11 -0.766761 0.000296959 REST-independent FOXC1 2296 ENSG00000054598 Q12948
FOXF2 -0.510721398762474 0.00100018844728906 -0.450861 0.0348058 -0.462575661761703 0.00284758152726272 -0.442121 0.000296959 REST-independent FOXF2 2295 ENSG00000137273 Q12947
FOXO4 -0.77263582004655 4.32628649646561e-07 -0.756593 0.000909465 -0.69445050465736 5.36773843650604e-06 -0.795175 0.000296959 REST-independent FOXO4 4303 ENSG00000184481 P98177
FRMD5 -1.01665469689445 0.000497398976912877 -0.760999 0.00824627 -1.23085722690623 2.00599821550103e-05 -1.12985 0.000296959 REST-independent FRMD5 84978 ENSG00000171877 Q7Z6J6
FRRS1 -0.688180875699012 0.0382401378755699 -0.732677 0.000909465 -0.724468371277805 0.0230757719414491 -0.585409 0.000558687 REST-independent FRRS1 391059 ENSG00000156869 Q6ZNA5
FTO -0.553790511767024 4.82267525445048e-05 -0.623236 0.0016575 -0.370401447772207 0.00990102042880843 -0.435796 0.000296959 REST-independent FTO 79068 ENSG00000140718 Q9C0B1
FXYD6 -0.942000451088595 4.66920003632017e-05 -0.651607 0.00296644 -0.857195232687627 0.000181835419781973 -0.784282 0.000296959 REST-independent FXYD6 53826 ENSG00000137726 Q9H0Q3
FZD10 -0.508601520215159 0.0317209731610911 -0.587075 0.0171318 -1.13340101873234 1.48435172205559e-07 -1.00053 0.000296959 REST-independent FZD10 11211 ENSG00000111432 Q9ULW2
FZD8 -0.511145731658998 0.0302051133732222 -0.479858 0.0469003 -0.607830681776068 0.00628010087091721 -0.628354 0.000296959 REST-independent FZD8 8325 ENSG00000177283 Q9H461
G2E3 -0.803721677102301 0.000208156151857403 -0.812781 0.000909465 -0.530006329891763 0.0213473971227099 -0.644624 0.000296959 REST-independent G2E3 55632 ENSG00000092140 Q7L622
G6PD -0.638551078086993 9.31747066809025e-07 -0.664104 0.00943399 -0.848922101218845 9.68162589860484e-12 -0.768139 0.000296959 REST-independent G6PD 2539 ENSG00000160211 P11413
GALNT10 -0.692170854035957 2.46385190212792e-05 -0.504092 0.0220606 -0.503356686391754 0.00287284656346892 -0.437315 0.0007968 REST-independent GALNT10 55568 ENSG00000164574 Q86SR1
GAP43 -0.957367674766839 1.3870709109368e-05 -0.969008 0.000909465 -0.604458097622108 0.00650589359959853 -0.508743 0.00286777 REST-independent GAP43 2596 ENSG00000172020 P17677
GAS1 -0.754495512547526 5.90427400486805e-09 -0.636548 0.0016575 -0.436488243410687 0.00156513227440137 -0.368237 0.0018777 REST-independent GAS1 2619 ENSG00000180447 P54826
GCDH -0.972784323404986 8.19071630152425e-08 -0.940012 0.000909465 -0.823853488391034 5.67944480025303e-06 -0.746554 0.000296959 REST-independent GCDH 2639 ENSG00000105607 Q92947
GCNT1 -0.55329719335409 0.0177331618000898 -0.492074 0.0420653 -0.527822854573245 0.0209068395266539 -0.43101 0.00430902 REST-independent GCNT1 2650 ENSG00000187210 Q02742
GEMIN5 -0.506926411319645 0.000236699761319886 -0.473868 0.0177816 -0.410254776595373 0.00361706921987969 -0.366243 0.00378348 REST-independent GEMIN5 25929 ENSG00000082516 Q8TEQ6
GEMIN6 -0.719826171497182 0.000326088204839072 -0.83179 0.000909465 -0.737105052520654 0.000176995072821807 -0.816496 0.000296959 REST-independent GEMIN6 79833 ENSG00000152147 Q8WXD5
GHDC -0.656996455071678 0.000163561534459251 -0.68193 0.000909465 -0.652432785958005 0.000145429314064529 -0.669661 0.000296959 REST-independent GHDC 84514 ENSG00000167925 Q8N2G8
GJA1 -0.529102978017777 0.000753358749604787 -0.495476 0.0144228 -0.539466662743021 0.000440554594584976 -0.46219 0.000296959 REST-independent GJA1 2697 ENSG00000152661 P17302
GLRX2 -0.775593226796513 8.49283106919931e-06 -0.808755 0.000909465 -0.840427929425137 8.54861345235332e-07 -0.871622 0.000296959 REST-independent GLRX2 51022 ENSG00000023572 Q9NS18
GMDS -0.492485226718039 0.00677205494551429 -0.485141 0.0277773 -0.624047051546329 0.000263482044852754 -0.553267 0.000296959 REST-independent GMDS 2762 ENSG00000112699 O60547
GMPPA -0.667883176048546 0.000539566059626155 -0.603521 0.00504662 -0.697638534355933 0.00021107241064838 -0.667586 0.000296959 REST-independent GMPPA 29926 ENSG00000144591 Q96IJ6
GMPR -0.946081411679053 0.0125237758117684 -1.13064 0.000909465 -1.5695017341215 2.84271256979117e-05 -1.53646 0.000296959 REST-independent GMPR 2766 ENSG00000137198 P36959
GMPR2 -0.478107494874782 0.00315765436363312 -0.448856 0.0398121 -0.452545305360745 0.00473351267172368 -0.454192 0.000296959 REST-independent GMPR2 51292 ENSG00000284752;ENSG00000100938 Q9P2T1
GNB1L -1.25915370265592 6.83082136972953e-09 -1.30194 0.0131102 -1.19204467442394 2.95403219835029e-08 -1.28482 0.000296959 REST-independent GNB1L 54584 ENSG00000185838 Q9BYB4
GNG7 -0.632719832039166 9.52446086553196e-05 -0.637036 0.00296644 -0.472903105640233 0.00439677897918279 -0.405952 0.00360294 REST-independent GNG7 2788 ENSG00000176533 O60262
GNL3L -0.503943476956859 0.0107839692415755 -0.456697 0.0297133 -0.460367319570056 0.0191098001978051 -0.422638 0.0007968 REST-independent GNL3L 54552 ENSG00000130119 Q9NVN8
GPATCH1 -0.696928790482643 3.11119132435257e-05 -0.666119 0.000909465 -0.735865983424118 7.34799523523855e-06 -0.80996 0.000296959 REST-independent GPATCH1 55094 ENSG00000076650 Q9BRR8
GPATCH4 -0.689717033799058 1.46092403769789e-07 -0.631459 0.000909465 -0.730085080585704 1.27976182268547e-08 -0.680028 0.000296959 REST-independent GPATCH4 54865 ENSG00000160818 E9PAV9;A8KAG1;A0A0A0MRK1;F2Z3C6;F8W895;E9PPY4
GPC2 -0.680688387451184 0.0292456595583565 -0.563499 0.0418306 -0.714459078256424 0.0177695790216627 -0.774024 0.000558687 REST-independent GPC2 221914 ENSG00000213420 Q8N158
GPD1L -0.646343519962172 1.97963427826e-06 -0.663829 0.000909465 -0.347500930504521 0.0196858481129281 -0.411466 0.000296959 REST-independent GPD1L 23171 ENSG00000152642 Q8N335
GPM6A -0.994452514141921 2.04666378354258e-05 -0.696603 0.0016575 -0.713003837967879 0.0026082141094584 -0.581935 0.000296959 REST-independent GPM6A 2823 ENSG00000150625 P51674
GPR162 -1.06788566589831 0.0269019045759589 -1.34309 0.00454554 -1.19164320409285 0.0107987326780377 -0.698894 0.0430138 REST-independent GPR162 27239 ENSG00000250510 Q16538
GPR50 -0.760859376363603 0.00485492053849702 -0.748616 0.00233451 -0.604699787451369 0.0267138235394376 -0.791096 0.000296959 REST-independent GPR50 9248 ENSG00000102195 Q13585
GRAMD4 -0.566490090789132 0.000205558133158492 -0.541662 0.00986453 -0.380894309990792 0.0174709873287365 -0.372705 0.00341938 REST-independent GRAMD4 23151 ENSG00000075240 Q6IC98
GRB14 -0.750495913284833 0.000328982918602928 -0.675275 0.0016575 -0.561706466390262 0.00798497007458434 -0.701722 0.000296959 REST-independent GRB14 2888 ENSG00000115290 Q14449
GRHL1 -1.10684614029564 2.04991374795208e-05 -1.22103 0.000909465 -0.87912159033052 0.00061360074454061 -0.914849 0.000296959 REST-independent GRHL1 29841 ENSG00000134317 Q9NZI5
GRWD1 -0.588949101795203 4.50085228146053e-06 -0.496934 0.00824627 -0.626996690808652 5.52620190451455e-07 -0.575432 0.000296959 REST-independent GRWD1 83743 ENSG00000105447 Q9BQ67
GSTCD -0.602031048811476 0.00423726438680229 -0.626724 0.006 -0.581586421795138 0.00502733788587981 -0.607778 0.000296959 REST-independent GSTCD 79807 ENSG00000138780 Q8NEC7
GTF2E2 -0.468985323150544 0.00180044881816102 -0.531426 0.0116316 -0.619414544064402 1.23068228651536e-05 -0.661006 0.000296959 REST-independent GTF2E2 2961 ENSG00000197265 P29084
GTF2F2 -0.467418786460669 0.0013570196956554 -0.437254 0.0398121 -0.476933610142846 0.000816562607926572 -0.495985 0.000296959 REST-independent GTF2F2 2963 ENSG00000188342 P13984
GTF2H4 -0.666842132115007 0.000109794072133861 -0.609724 0.00403448 -0.64728377936562 0.000145429314064529 -0.626085 0.000296959 REST-independent GTF2H4 2968 ENSG00000221974;ENSG00000233149;ENSG00000234370;ENSG00000226384;ENSG00000213780;ENSG00000236895 Q92759
GTPBP8 -0.673889415529495 4.67226178592555e-06 -0.627355 0.0016575 -0.663391329975879 4.95094290329036e-06 -0.594697 0.000296959 REST-independent GTPBP8 29083 ENSG00000163607 Q8N3Z3
GUCY1B3 -0.551112816918438 0.000726368003380255 -0.516551 0.0177816 -0.458899261464151 0.00542152775260999 -0.421599 0.0007968 REST-independent GUCY1B1 2983 ENSG00000061918 Q02153
H1F0 -0.392897993106179 0.0031522020651559 -0.431637 0.0343929 -0.430564636380424 0.000759415086762544 -0.454403 0.000296959 REST-independent H1-0 3005 ENSG00000189060 P07305
HADH -0.602289380018031 1.4023561592526e-05 -0.55735 0.00403448 -0.566604549997281 3.90537731343412e-05 -0.573352 0.000296959 REST-independent HADH 3033 ENSG00000138796 Q16836
HAND1 -0.934490742131873 7.00219048598373e-06 -0.953353 0.000909465 -1.03547750496154 3.75537496893936e-07 -0.949228 0.000296959 REST-independent HAND1 9421 ENSG00000113196 O96004
HAUS7 -0.890337470238043 8.32554122362852e-08 -0.852018 0.000909465 -0.926262389605729 1.39924009627197e-08 -0.88848 0.000296959 REST-independent HAUS7 55559 ENSG00000213397 Q99871
HDAC4 -0.844192243099697 3.92902901451583e-06 -0.874281 0.000909465 -0.733477812812079 5.98867044720826e-05 -0.698147 0.000296959 REST-independent HDAC4 9759 ENSG00000068024 P56524
HDAC5 -0.845714306136527 6.23595916283832e-09 -0.708934 0.000909465 -0.754875473810676 2.08227113491269e-07 -0.650161 0.000296959 REST-independent HDAC5 10014 ENSG00000108840 Q9UQL6
HECTD3 -0.867528150062121 1.30860346616927e-10 -0.877907 0.000909465 -0.756499187330879 1.85599697673529e-08 -0.795813 0.000296959 REST-independent HECTD3 79654 ENSG00000126107 Q5T447
HELLS -0.47269474642699 0.0036336944736053 -0.472144 0.0258166 -0.507915909295162 0.00121560988238639 -0.423087 0.00102747 REST-independent HELLS 3070 ENSG00000119969 Q9NRZ9
HEMK1 -0.770274992954277 5.06614453895491e-05 -0.719871 0.0109013 -0.801697585790391 1.7810663455879e-05 -0.837183 0.000296959 REST-independent HEMK1 51409 ENSG00000114735 Q9Y5R4
HERC4 -0.93764658269513 6.40014326180852e-09 -0.923516 0.000909465 -0.873914128243604 5.11452082775743e-08 -0.855653 0.000296959 REST-independent HERC4 26091 ENSG00000148634 Q5GLZ8
HERC5 -0.549017081888728 0.000407952593622843 -0.517422 0.0140774 -0.404856572814365 0.0116882809684376 -0.359066 0.00497304 REST-independent HERC5 51191 ENSG00000138646 Q9UII4
HES1 -0.824479158850312 9.09762747131329e-07 -0.757634 0.000909465 -0.94229075826065 7.68132203712746e-09 -0.929533 0.000296959 REST-independent HES1 3280 ENSG00000114315 Q14469
HHIP -1.35923866693011 6.48149813202851e-07 -1.24285 0.000909465 -1.22849712601222 4.70487142490264e-06 -1.2458 0.000296959 REST-independent HHIP 64399 ENSG00000164161 Q96QV1
HHLA3 -0.793834229765343 0.000994920689723156 -0.840856 0.000909465 -1.1353933630826 8.01930597029644e-07 -1.14991 0.000296959 REST-independent HHLA3 11147 ENSG00000197568 Q9XRX5
HIBADH -0.791962359812886 1.81811570974668e-09 -0.700815 0.00233451 -0.717335837691444 4.37342037402451e-08 -0.691053 0.000296959 REST-independent HIBADH 11112 ENSG00000106049 P31937
HIBCH -1.22543960234542 3.80574525466597e-15 -1.24789 0.000909465 -1.27744408550262 1.18382504613223e-16 -1.22083 0.000296959 REST-independent HIBCH 26275 ENSG00000198130 Q6NVY1
HLX -0.593494791176236 0.00374961126222066 -0.567023 0.0167576 -0.816932930337293 2.6899315967146e-05 -0.789405 0.000296959 REST-independent HLX 3142 ENSG00000136630 Q14774
HMMR -0.478889024067786 0.00550024851522484 -0.444621 0.0346267 -0.502052517497179 0.00262070740730784 -0.46264 0.000558687 REST-independent HMMR 3161 ENSG00000072571 O75330
HNRNPA2B1 -0.47831169668883 1.06415586939984e-07 -0.466066 0.0398121 -0.566592869546765 6.27695651765615e-11 -0.554568 0.000296959 REST-independent HNRNPA2B1 3181 ENSG00000122566 P22626
HNRNPH3 -0.587565285898785 9.38658825187361e-07 -0.571743 0.00403448 -0.574267784917316 1.2510866619804e-06 -0.591409 0.000296959 REST-independent HNRNPH3 3189 ENSG00000096746 P31942
HOMEZ -0.396855085878459 0.0138654637272351 -0.473502 0.0300065 -0.530301765854395 0.000394549008296507 -0.547148 0.000296959 REST-independent HOMEZ 57594 ENSG00000215271 Q8IX15
HOXA1 -1.05912435210352 4.91956995352706e-07 -1.27917 0.000909465 -1.52133329101452 9.07312598942794e-13 -1.57885 0.000296959 REST-independent HOXA1 3198 ENSG00000105991 P49639
HOXA10 -0.810041200169168 3.05490567074071e-10 -0.766837 0.00454554 -0.868816330377332 5.74686428680642e-12 -0.87056 0.000296959 REST-independent HOXA10 3206 ENSG00000253293 P31260
HOXA11 -0.798166161570713 1.98330860036019e-08 -0.798635 0.000909465 -0.860389577985672 7.03556782184501e-10 -0.942912 0.000296959 REST-independent HOXA11 3207 ENSG00000005073 P31270
HOXA4 -0.642335589926486 0.0474191600847723 -0.59953 0.0167576 -0.637963405009768 0.0427145786459856 -0.686379 0.000296959 REST-independent HOXA4 3201 ENSG00000197576 Q00056
HOXA5 -0.869832866256009 1.42575115245618e-12 -0.825187 0.000909465 -0.978259462536448 4.89326055989208e-16 -0.932291 0.000296959 REST-independent HOXA5 3202 ENSG00000106004 P20719
HOXA9 -1.07157341400596 1.29269166909566e-11 -0.882347 0.00403448 -1.07185237045345 7.20859097840939e-12 -1.02596 0.000296959 REST-independent HOXA9 3205 ENSG00000078399 P31269
HOXB13 -0.650727484531605 2.99017625265743e-05 -0.607829 0.00403448 -0.758590450320069 5.67828704058146e-07 -0.702394 0.000296959 REST-independent HOXB13 10481 ENSG00000159184 Q92826
HOXB2 -0.700602491157158 0.000495299507399541 -0.674345 0.00296644 -0.9996751184199 1.80100591892648e-07 -0.959127 0.000296959 REST-independent HOXB2 3212 ENSG00000173917 P14652
HOXB6 -0.615443254158617 6.86022007567982e-05 -0.558338 0.0324863 -0.643975976216492 2.03865535021891e-05 -0.629065 0.000296959 REST-independent HOXB6 3216 ENSG00000108511 P17509
HOXB9 -0.771750034822607 4.52165996999425e-11 -0.716593 0.000909465 -0.691287803532839 3.40652790765866e-09 -0.697305 0.000296959 REST-independent HOXB9 3219 ENSG00000170689 P17482
HOXC10 -0.559398360111783 0.000704939569735444 -0.533948 0.0131102 -0.356607614845149 0.0432394007912477 -0.346339 0.0118844 REST-independent HOXC10 3226 ENSG00000180818 Q9NYD6
HOXC13 -0.572536020716385 0.00363807075021742 -0.578952 0.00824627 -0.928727179162328 3.63927893933585e-07 -0.819195 0.000296959 REST-independent HOXC13 3229 ENSG00000123364 P31276
HOXC8 -0.732561752313884 0.00727385019525355 -0.553745 0.0272415 -0.553899583838789 0.0466941532738053 -0.420633 0.0194071 REST-independent HOXC8 3224 ENSG00000037965 P31273
HOXC9 -0.849705947904418 2.93602310207699e-08 -0.77576 0.000909465 -0.849583970324568 1.97769797526018e-08 -0.822441 0.000296959 REST-independent HOXC9 3225 ENSG00000180806 P31274
HOXD13 -0.738386723886949 7.28796481296727e-11 -0.67828 0.000909465 -0.62569236930935 3.7593485905259e-08 -0.610926 0.000296959 REST-independent HOXD13 3239 ENSG00000128714 P35453
HOXD-AS1 -0.560982962855407 0.0177331618000898 -0.501599 0.0475519 -0.593476584927539 0.00916173693632702 -0.408365 0.018772 REST-independent HAGLR 401022 ENSG00000224189
HPGD -0.822402992701371 0.00757914195360802 -0.650878 0.00943399 -1.12397920324156 0.000150229253916724 -0.982338 0.000296959 REST-independent HPGD 3248 ENSG00000164120 P15428
HPS3 -0.641768013197039 2.03282924335636e-05 -0.710052 0.0016575 -0.56523693619582 0.000180383909223221 -0.654296 0.000296959 REST-independent HPS3 84343 ENSG00000163755 Q969F9
HPSE -0.99836519688728 4.50086566881339e-06 -0.852798 0.000909465 -1.05867558551386 8.05911567731753e-07 -1.02399 0.000296959 REST-independent HPSE 10855 ENSG00000173083 Q9Y251
HRSP12 -0.99937834341694 2.07328458559822e-09 -0.949237 0.000909465 -1.23755330613604 4.68299565584177e-14 -1.13548 0.000296959 REST-independent RIDA 10247 ENSG00000132541 P52758
HSD17B11 -0.736471653255712 1.60165686652844e-06 -0.666678 0.000909465 -0.603984349031254 9.68095699288491e-05 -0.456852 0.000558687 REST-independent HSD17B11 51170 ENSG00000198189 Q8NBQ5
HSD17B4 -0.673531141191559 1.93902891486608e-09 -0.668418 0.000909465 -0.733284196506579 2.44684330822613e-11 -0.732774 0.000296959 REST-independent HSD17B4 3295 ENSG00000133835 P51659
HSP90AB1 -0.556758331123987 4.63477937006819e-10 -0.527699 0.0134079 -0.633239793002724 2.90814431861393e-13 -0.609002 0.000296959 REST-independent HSP90AB1 3326 ENSG00000096384 P08238
HSPA1B -2.11462675532376 1.16948820055527e-97 -2.09019 0.000909465 -2.19410657888604 5.85894097129274e-105 -2.21856 0.000296959 REST-independent HSPA1B 3304 ENSG00000232804;ENSG00000204388;ENSG00000231555;ENSG00000212866;ENSG00000224501 P0DMV9;P0DMV8
HSPBP1 -0.516161442875971 0.00467636085110722 -0.565797 0.00403448 -0.683485396651912 5.72345521611696e-05 -0.709391 0.000296959 REST-independent HSPBP1 23640 ENSG00000133265 Q9NZL4
HSPH1 -0.957648226848595 2.60730438487584e-19 -0.911888 0.000909465 -0.868039433476531 3.14700719359244e-16 -0.85526 0.000296959 REST-independent HSPH1 10808 ENSG00000120694 Q92598
HTATIP2 -0.689072255138648 5.37952022909349e-06 -0.738746 0.000909465 -0.532880035846432 0.000541698050975033 -0.497142 0.000296959 REST-independent HTATIP2 10553 ENSG00000109854 Q9BUP3
ICAM3 -0.598563363862583 0.00887550922221927 -0.656554 0.00693636 -0.775725666080521 0.000369738536898485 -0.842168 0.000296959 REST-independent ICAM3 3385 ENSG00000076662 P32942
ICOSLG -0.84181294519685 0.000262517433145653 -0.802738 0.000909465 -0.607437714248895 0.00921015119540935 -0.820473 0.000296959 REST-independent ICOSLG 23308 ENSG00000160223 O75144
ID3 -0.600507277002388 0.00112314047802381 -0.610272 0.00233451 -0.868033570323045 3.67451460903781e-07 -0.836382 0.000296959 REST-independent ID3 3399 ENSG00000117318;ENSG00000283060 Q02535
IFIT1 -0.707541830636675 0.0116936619555647 -0.653029 0.00986453 -1.01250294196772 0.000152280639439551 -1.02032 0.000296959 REST-independent IFIT1 3434 ENSG00000185745 P09914
IFT172 -0.618550745505015 0.00111112925582572 -0.593111 0.00454554 -0.553466616967992 0.00353723169101832 -0.599025 0.000296959 REST-independent IFT172 26160 ENSG00000138002 Q9UG01
IFT27 -0.663382633891915 0.00102854602204722 -0.58493 0.006 -0.466852518445982 0.0270505161090863 -0.481416 0.000296959 REST-independent IFT27 11020 ENSG00000100360 Q9BW83
IFT80 -0.51395514195939 0.0350754377243359 -0.477142 0.0314201 -0.551018143589055 0.0177213954809917 -0.461118 0.000296959 REST-independent IFT80 57560 ENSG00000068885 Q9P2H3
IGDCC3 -0.672969824259163 0.000876516962169336 -0.552633 0.0127682 -0.477212401232647 0.0228826788672995 -0.607618 0.000296959 REST-independent IGDCC3 9543 ENSG00000174498 Q8IVU1
IGF2BP2 -1.06458797831366 3.37638701382155e-12 -0.980727 0.000909465 -0.892642096294218 5.40669789939125e-09 -0.824626 0.000296959 REST-independent IGF2BP2 10644 ENSG00000073792 Q9Y6M1
IGF2BP3 -0.828079071521917 6.6062226910413e-05 -0.745862 0.000909465 -0.715339850646436 0.000620651844160022 -0.686608 0.000296959 REST-independent IGF2BP3 10643 ENSG00000136231 O00425
IKBKB -0.4500525577545 0.0213727364038254 -0.509121 0.0151289 -0.403638307430031 0.0386849957396488 -0.401457 0.0007968 REST-independent IKBKB 3551 ENSG00000104365 O14920
INTS3 -0.87626448043726 1.62885865036779e-13 -0.895822 0.000909465 -0.855439549714036 3.50882187321445e-13 -0.856919 0.000296959 REST-independent INTS3 65123 ENSG00000143624;ENSG00000262826 Q68E01
INTS4 -0.878923924994683 1.61639943987243e-06 -0.814733 0.000909465 -0.790013312460582 1.50794146730052e-05 -0.777977 0.000296959 REST-independent INTS4 92105 ENSG00000149262 Q96HW7
INTS5 -0.64706057671665 3.62865342526953e-06 -0.618902 0.00353789 -0.654122263844944 1.9626892685663e-06 -0.670208 0.000296959 REST-independent INTS5 80789 ENSG00000185085 Q6P9B9
INTS8 -0.738590450235733 7.26023639532749e-08 -0.714442 0.000909465 -0.61308904040133 9.86997335433256e-06 -0.576782 0.000558687 REST-independent INTS8 55656 ENSG00000164941 Q75QN2
INTS9 -0.709187117191366 0.000143114642006302 -0.727722 0.000909465 -0.590242507368377 0.00165053931516233 -0.499684 0.000296959 REST-independent INTS9 55756 ENSG00000104299 Q9NV88
IPO4 -0.547104198605395 6.62017404608635e-06 -0.533716 0.00403448 -0.424721983638862 0.000667969388869429 -0.41592 0.000558687 REST-independent IPO4 79711 ENSG00000285248;ENSG00000196497 Q8TEX9
IQGAP2 -0.514671809579026 0.0128898698938841 -0.497341 0.0214127 -0.42363037724195 0.0447190565507266 -0.376413 0.00341938 REST-independent IQGAP2 10788 ENSG00000145703 Q13576
IRF3 -0.819948267332443 5.37236176614041e-07 -0.823373 0.0269033 -0.888736593291836 2.81997262002676e-08 -1.08591 0.000296959 REST-independent IRF3 3661 ENSG00000126456 Q14653
ISL1 -0.983228299452797 2.75845026101301e-07 -0.882543 0.000909465 -0.926143329375978 9.63623941637219e-07 -0.715575 0.000296959 REST-independent ISL1 3670 ENSG00000016082 P61371
ITSN1 -0.459508966490596 0.0140098454423221 -0.514111 0.0134079 -0.41720122290823 0.0247468914884973 -0.415461 0.000296959 REST-independent ITSN1 6453 ENSG00000205726 Q15811
JAKMIP1 -0.927456384242311 9.34157595719486e-05 -0.979234 0.000909465 -0.504955255352113 0.045585250389689 -0.54391 0.0007968 REST-independent JAKMIP1 152789 ENSG00000152969 Q96N16
JUN -0.427291375812948 0.000205558133158492 -0.415187 0.0393032 -0.604080342985975 1.63525355310585e-08 -0.590383 0.000296959 REST-independent JUN 3725 ENSG00000177606 P05412
JUP -0.450147418858727 0.00192273987376967 -0.444681 0.0430966 -0.433618595920305 0.00243870555784351 -0.446649 0.000296959 REST-independent JUP 3728 ENSG00000173801 P14923
KAT2B -0.582707316857119 0.00257269765632902 -0.523345 0.0183472 -0.451284575780523 0.02294187773141 -0.354037 0.010581 REST-independent KAT2B 8850 ENSG00000114166 Q92831
KBTBD6 -0.713515821474888 0.000115256982152883 -0.636873 0.00353789 -0.459599301257532 0.0199727889034671 -0.417237 0.000296959 REST-independent KBTBD6 89890 ENSG00000165572 Q86V97
KCNB2 -1.53921772405389 0.000184685382206178 -1.06374 0.000909465 -0.89785286494861 0.0274312850586854 -0.934805 0.00146148 REST-independent KCNB2 9312 ENSG00000182674 Q92953
KCNT2 -1.20151467586625 0.00450405568846265 -1.01296 0.000909465 -0.991144520986836 0.0196126479665279 -0.986041 0.000296959 REST-independent KCNT2 343450 ENSG00000162687 Q6UVM3
KCTD1 -0.703339508595297 0.000417896914217909 -0.67677 0.00353789 -0.524977843380251 0.0102481337272711 -0.588905 0.000296959 REST-independent KCTD1 284252 ENSG00000134504 Q719H9
KDM1B -1.07161669081167 1.58931561422129e-08 -1.01137 0.000909465 -0.784498312921337 5.36612904367964e-05 -0.835906 0.000296959 REST-independent KDM1B 221656 ENSG00000165097 Q8NB78
KDM6A -0.627452533824137 0.000614800709043571 -0.611494 0.0016575 -0.576503771849455 0.0015966030734878 -0.546828 0.000296959 REST-independent KDM6A 7403 ENSG00000147050 O15550
KHDC1 -1.80787824932422 0.00587986406178033 -1.47425 0.0171318 -1.63413330734212 0.00984867281661353 -1.52057 0.0107264 REST-independent KHDC1 80759 ENSG00000135314 Q4VXA5
KHDRBS3 -0.829131809658432 4.76450165124716e-06 -0.917468 0.000909465 -0.621387944723735 0.000734619585081906 -0.737329 0.000296959 REST-independent KHDRBS3 10656 ENSG00000131773 O75525
KIAA0020 -0.650214208086221 4.78360834720865e-06 -0.53893 0.0109013 -0.561600078824002 8.63313850293273e-05 -0.443449 0.000558687 REST-independent PUM3 9933 ENSG00000080608 Q15397
KIAA0226L -1.19966175952064 1.05399622084331e-07 -0.940015 0.000909465 -0.753683908601859 0.000732292220086703 -0.700225 0.000296959 REST-independent RUBCNL 80183 ENSG00000102445 Q9H714
KIAA0391 -0.726961818560913 1.09302332324468e-08 -0.632392 0.00403448 -0.624180965631109 9.93768679623766e-07 -0.63597 0.000296959 REST-independent PRORP 9692 ENSG00000100890 O15091
KIAA1797 -0.859554285304582 1.16331194165538e-08 -0.842708 0.000909465 -0.611026033741581 8.92441468669025e-05 -0.627191 0.000296959 REST-independent FOCAD 54914 ENSG00000188352 Q5VW36
KIFAP3 -0.541634412340747 0.000136177145930157 -0.481894 0.0225537 -0.378628028022296 0.0107545896321338 -0.382988 0.00102747 REST-independent KIFAP3 22920 ENSG00000075945 Q92845
KIT -0.709278615232603 0.000833835719996242 -0.669647 0.000909465 -0.486952569559797 0.0297278860357824 -0.502945 0.000296959 REST-independent KIT 3815 ENSG00000157404 P10721
KLF15 -0.929173083645182 4.32628649646561e-07 -1.01533 0.000909465 -0.615738126643329 0.0011439478560401 -0.61795 0.000296959 REST-independent KLF15 28999 ENSG00000163884 Q9UIH9
KLHL13 -0.631739491853511 2.26860214610924e-05 -0.589953 0.00403448 -0.488381907387519 0.00136765001602803 -0.489169 0.000296959 REST-independent KLHL13 90293 ENSG00000003096 Q9P2N7
KLRG1 -0.936135812246476 0.00277399390451436 -0.774788 0.00648843 -1.48973636832503 2.03442438939984e-06 -1.19509 0.000296959 REST-independent KLRG1 10219 ENSG00000139187 Q96E93
L3MBTL2 -0.833966618100483 5.73922454019345e-09 -0.782958 0.000909465 -0.900104243057342 1.5280791799768e-10 -0.838566 0.000296959 REST-independent L3MBTL2 83746 ENSG00000100395 Q969R5
LARS2 -0.477994270370968 0.000394502471082831 -0.549282 0.00454554 -0.424238483264608 0.00172917804717031 -0.373931 0.00305388 REST-independent LARS2 23395 ENSG00000011376 Q15031
LDB2 -1.31235055390623 0.000101911023786134 -0.97061 0.000909465 -0.981305578875172 0.00303212873198239 -1.13741 0.000296959 REST-independent LDB2 9079 ENSG00000169744 O43679
LEF1 -0.44126543491612 0.00377582339541922 -0.489839 0.0329592 -0.532289755333839 0.000233381315756986 -0.546398 0.000296959 REST-independent LEF1 51176 ENSG00000138795 Q9UJU2
LFNG -1.83395605395762 2.44393171926376e-05 -1.11671 0.00504662 -1.74517522909329 4.10383812117537e-05 -0.885148 0.00595774 REST-independent LFNG 3955 ENSG00000106003 Q8NES3
LHFP -0.722311526745114 3.75852395637695e-05 -0.673645 0.000909465 -0.765034187629776 8.55257481022004e-06 -0.78865 0.000296959 REST-independent LHFPL6 10186 ENSG00000183722 Q9Y693
LIG3 -0.524876658262762 0.000575823872867397 -0.544057 0.00824627 -0.574439456602642 0.000102625699925088 -0.507003 0.000296959 REST-independent LIG3 3980 ENSG00000005156 P49916
LIMA1 -0.429532012134472 0.00968181584275878 -0.464707 0.0258166 -0.40057266612785 0.0145988509909187 -0.395699 0.00102747 REST-independent LIMA1 51474 ENSG00000050405 Q9UHB6
LMAN2L -0.489095915320176 0.000913607670921392 -0.51138 0.0174474 -0.620400177487473 1.0195075735148e-05 -0.730931 0.000296959 REST-independent LMAN2L 81562 ENSG00000114988 Q9H0V9
LOC100499227 -1.46415933995243 0.00211011497892236 -1.20731 0.00648843 -1.37216192341431 0.00313352401757591 -1.24779 0.00268012 REST-independent
LOC100505894 -1.11464561584192 0.000940035079272259 -1.14446 0.000909465 -1.75798304507229 3.85401159961949e-07 -1.65381 0.000296959 REST-independent
LOC92249 -0.663647160218193 0.00498043575838133 -0.753765 0.00233451 -0.820985477389172 0.000295971226951984 -0.787081 0.000296959 REST-independent
LOH12CR1 -0.828632412898171 0.000254257160623056 -0.602435 0.0157545 -0.511847482775141 0.0280350695413984 -0.551456 0.00268012 REST-independent BORCS5 118426 ENSG00000165714;ENSG00000280689 Q969J3
LPCAT1 -0.649925964714726 4.65493939522094e-09 -0.61659 0.000909465 -0.396609312018267 0.00079629849431497 -0.379047 0.00286777 REST-independent LPCAT1 79888 ENSG00000153395;ENSG00000275079 Q8NF37
LPCAT4 -0.576143035454337 0.000675276646916895 -0.598233 0.00504662 -0.364200649839758 0.0436943105907062 -0.411282 0.00286777 REST-independent LPCAT4 254531 ENSG00000176454 Q643R3
LRCH2 -0.767988302637524 0.00397540546390735 -0.716148 0.000909465 -0.683482451120257 0.0102481337272711 -0.63901 0.000296959 REST-independent LRCH2 57631 ENSG00000130224 Q5VUJ6
LRCH4 -0.577091724052784 0.00218222249845472 -0.631409 0.00454554 -0.554606303710799 0.00279607815042238 -0.582794 0.000296959 REST-independent LRCH4 4034 ENSG00000077454 O75427
LRRC49 -0.732662738479208 3.38217633282812e-05 -0.698035 0.000909465 -1.0684716721129 5.75101983893311e-10 -1.00528 0.000296959 REST-independent LRRC49 54839 ENSG00000137821 Q8IUZ0
LRRCC1 -0.979579945522588 1.49548637322333e-07 -1.08844 0.000909465 -0.893825888428472 1.25521696152419e-06 -1.14775 0.000296959 REST-independent LRRCC1 85444 ENSG00000133739 Q9C099
LRRTM4 -1.06628522403519 0.0198046878441647 -1.19563 0.0016575 -0.996929056434872 0.0253267560169291 -1.19683 0.000558687 REST-independent LRRTM4 80059 ENSG00000176204 Q86VH4
LUC7L -0.568077561827104 0.000116430226600379 -0.61602 0.00296644 -0.810273879235533 5.17024497979911e-09 -0.765302 0.000296959 REST-independent LUC7L 55692 ENSG00000007392 Q9NQ29
LYPLA2 -0.7505572510876239 1.08092531587027e-05 -0.722341 0.000909465 -0.892207011984042 5.65561632084473e-08 -0.836126 0.000296959 REST-independent LYPLA2 11313 ENSG00000011009 O95372
LYRM7 -0.621500612535303 0.00221531681194109 -0.5971 0.00741738 -0.570031727330196 0.00480945871938404 -0.537219 0.000296959 REST-independent LYRM7 90624 ENSG00000186687 Q5U5X0
LZTR1 -0.622936764055514 4.98388700212336e-07 -0.669072 0.000909465 -0.63698235920947 1.72549779009156e-07 -0.646266 0.000296959 REST-independent LZTR1 8216 ENSG00000099949 Q8N653
MAD1L1 -0.958302279580786 2.17579524142218e-07 -0.851362 0.000909465 -0.745461274650909 7.08023673181247e-05 -0.784069 0.000296959 REST-independent MAD1L1 8379 ENSG00000002822 Q9Y6D9
MANEA -0.574094096117166 0.0264285969119435 -0.573296 0.00986453 -0.552195479892742 0.0291819112939518 -0.448896 0.000558687 REST-independent MANEA 79694 ENSG00000172469 Q5SRI9
MANSC1 -1.01849833710865 4.72117241765005e-09 -0.88767 0.000909465 -0.760691270687913 1.0665995939165e-05 -0.813435 0.000296959 REST-independent MANSC1 54682 ENSG00000111261;ENSG00000281818 Q9H8J5
MAOA -0.880465351108667 4.88175424493209e-05 -0.665084 0.006 -0.666491734516146 0.00214567024677906 -0.781456 0.000296959 REST-independent MAOA 4128 ENSG00000189221 P21397
MAP2K5 -0.540925844308325 0.00749950856653534 -0.504314 0.0355298 -0.423785875399623 0.040765391903813 -0.489455 0.000558687 REST-independent MAP2K5 5607 ENSG00000137764 Q13163
MAP2K6 -0.829988005913121 5.01615402549075e-05 -0.800502 0.000909465 -0.938830584452599 2.5213599782925e-06 -0.992541 0.000296959 REST-independent MAP2K6 5608 ENSG00000108984 P52564
MAPRE2 -0.622484560382358 5.00119212053395e-07 -0.627278 0.000909465 -0.623056920095312 3.30399960501538e-07 -0.598222 0.000296959 REST-independent MAPRE2 10982 ENSG00000166974 Q15555
MARS -0.564538013575177 2.36972833705845e-07 -0.556846 0.00554039 -0.585063771539865 4.74103268319983e-08 -0.560305 0.000296959 REST-independent MARS1;SLA2 4141;84174 ENSG00000166986;ENSG00000101082 P56192;Q9H6Q3
MARS2 -0.590810106688849 0.00703020450123919 -0.546755 0.0123925 -0.513402249788335 0.0197393681115766 -0.499461 0.000296959 REST-independent MARS2 92935 ENSG00000247626 Q96GW9
MAST3 -0.655914456372639 4.36359793830494e-05 -0.637985 0.00233451 -0.545270738977327 0.000745103667793582 -0.570129 0.000296959 REST-independent MAST3 23031 ENSG00000099308 O60307
MAT2B -0.551272380345303 0.000112543588653939 -0.540088 0.00741738 -0.494038202173562 0.000547487218913433 -0.492127 0.000296959 REST-independent MAT2B 27430 ENSG00000038274 Q9NZL9
MCTS1 -0.662268932356944 2.57743930773216e-06 -0.661283 0.000909465 -0.627265052254668 7.24380810923636e-06 -0.601354 0.000296959 REST-independent MCTS1 28985 ENSG00000288295;ENSG00000232119 Q9ULC4
MCU -0.651616862492962 0.000120984619916865 -0.558817 0.0134079 -0.613957289083353 0.000264921010400808 -0.528815 0.000296959 REST-independent MCU 90550 ENSG00000156026 Q8NE86
ME2 -0.453526143802535 0.00164675752898803 -0.435312 0.0369801 -0.377805604846178 0.00971972240610797 -0.337829 0.00529474 REST-independent ME2 4200 ENSG00000082212 P23368
MED21 -0.431209051108062 0.0194197141768968 -0.535327 0.0134079 -0.554642086783002 0.0012163222683929 -0.522095 0.000296959 REST-independent MED21 9412 ENSG00000152944 Q13503
MEGF9 -0.582408401128905 0.00123594234303648 -0.593551 0.00296644 -0.659235257040192 0.00014908796924432 -0.59876 0.000296959 REST-independent MEGF9 1955 ENSG00000106780 Q9H1U4
MEIS1 -0.64131891352475 0.000844284388679549 -0.591252 0.0078661 -0.653591253994727 0.000516048505529522 -0.545618 0.000296959 REST-independent MEIS1 4211 ENSG00000143995 O00470
MEN1 -0.605763843628932 3.10449652350032e-06 -0.601357 0.000909465 -0.582899408526526 5.9199384147185e-06 -0.609175 0.000296959 REST-independent MEN1 4221 ENSG00000133895 O00255
METTL13 -0.570046298943596 8.95792038289999e-05 -0.602182 0.000909465 -0.522332177542233 0.000319077968818842 -0.54244 0.000296959 REST-independent EEF1AKNMT 51603 ENSG00000010165 Q8N6R0
METTL18 -0.618078109684161 0.0151921154922273 -0.638264 0.00943399 -0.697445543601898 0.00430072304203856 -0.764189 0.000296959 REST-independent METTL18 92342 ENSG00000171806 O95568
METTL2B -0.597537201848013 0.00173553154382119 -0.534693 0.0147234 -0.629762345596613 0.000678292207539999 -0.559551 0.000296959 REST-independent METTL2B 55798 ENSG00000165055 Q6P1Q9
METTL7A -0.734756629719778 0.00154034092226836 -0.748755 0.000909465 -1.03283594981984 3.52483622319179e-06 -1.02786 0.000296959 REST-independent METTL7A 25840 ENSG00000185432 Q9H8H3
MGC45800 -0.97355638285888 0.00100052072685038 -0.813544 0.00296644 -1.10391272316095 0.000152762014485572 -0.781772 0.000296959 REST-independent
MGC72080 -0.880603702781197 9.67425654993103e-05 -0.71769 0.0016575 -0.934043932902322 2.47917566226619e-05 -0.981584 0.000296959 REST-independent
MICAL1 -0.807778028421609 0.0291669846371178 -0.767695 0.000909465 -0.986483125526231 0.00458971285071303 -1.07133 0.000296959 REST-independent MICAL1 64780 ENSG00000135596 Q8TDZ2
MICU1 -0.433476434638689 0.00287147635406056 -0.496737 0.0157545 -0.492778428734039 0.000392183909399847 -0.506288 0.000296959 REST-independent MICU1 10367 ENSG00000107745 Q9BPX6
MINK1 -0.625979459256892 1.94146980964957e-05 -0.610161 0.00233451 -0.366604031592723 0.0215628542139959 -0.335193 0.0102932 REST-independent MINK1 50488 ENSG00000141503 Q8N4C8
MKI67IP -0.493686950175782 0.000410360440942576 -0.462212 0.0260877 -0.630555138745792 1.78631483971742e-06 -0.595603 0.000296959 REST-independent NIFK 84365 ENSG00000155438 Q9BYG3
MKS1 -0.547783888285835 0.000165982443874291 -0.469284 0.0269033 -0.519609762406815 0.000313054656878338 -0.477319 0.000296959 REST-independent MKS1 54903 ENSG00000011143 Q9NXB0
MLX -0.372748191721536 0.0213329332788438 -0.802555 0.00943399 -0.493425215257579 0.000886854829058699 -0.826712 0.000296959 REST-independent MLX 6945 ENSG00000108788 Q9UH92
MNAT1 -0.559120618635856 0.000167254915862806 -0.527012 0.0112456 -0.565572120098374 0.000107087945838722 -0.56938 0.000296959 REST-independent MNAT1 4331 ENSG00000020426 P51948
MON1A -0.624752068088485 0.000247930389412058 -0.626316 0.00296644 -0.844386000017512 2.28051679855991e-07 -0.739976 0.000296959 REST-independent MON1A 84315 ENSG00000164077 Q86VX9
MPV17 -0.749724264461555 0.000371510785581672 -0.709253 0.000909465 -0.780431400024203 0.000149369459579172 -0.684986 0.000296959 REST-independent MPV17 4358 ENSG00000115204 P39210
MRPL1 -0.681974302354467 0.00033475287128955 -0.700424 0.000909465 -0.722577380644823 9.81730654975618e-05 -0.743175 0.000296959 REST-independent MRPL1 65008 ENSG00000169288 Q9BYD6
MRPL16 -0.540418666412224 0.00803648122175387 -0.487884 0.0204927 -0.602979528926479 0.00193128324765717 -0.568224 0.000296959 REST-independent MRPL16 54948 ENSG00000166902 Q9NX20
MRPL24 -0.694750464215633 0.00117693495465186 -0.593069 0.00504662 -0.672426219945966 0.00146131519818426 -0.570315 0.000296959 REST-independent MRPL24 79590 ENSG00000143314 Q96A35
MRPL27 -0.509536335995333 0.0156126540583445 -0.466944 0.0324863 -0.698122254611537 0.000302189658053574 -0.650955 0.000296959 REST-independent MRPL27 51264 ENSG00000108826 Q9P0M9
MRPL35 -0.535013233296256 0.000112543588653939 -0.54431 0.0280346 -0.643557555726826 1.29557739104489e-06 -0.568282 0.000296959 REST-independent MRPL35 51318 ENSG00000132313 Q9NZE8
MRPL46 -0.541034347669435 0.00570680402743545 -0.494696 0.0265939 -0.675390397040253 0.000250790924414719 -0.608169 0.000296959 REST-independent MRPL46 26589 ENSG00000259494 Q9H2W6
MRPL9 -0.52662823200517 0.000704427603625107 -0.498229 0.0240882 -0.811217578181834 1.42904522638616e-08 -0.772187 0.000296959 REST-independent MRPL9 65005 ENSG00000143436 Q9BYD2
MRPS10 -0.450725845814395 0.00182813843363494 -0.432398 0.0400169 -0.5691675375527669 2.90331003768991e-05 -0.531347 0.000296959 REST-independent MRPS10 55173 ENSG00000048544 P82664
MRPS17 -0.507241036780407 0.0113904835835182 -0.519454 0.0160124 -0.617717130327968 0.00104747835189472 -0.66301 0.000296959 REST-independent MRPS17 51373 ENSG00000239789 Q9Y2R5
MRPS27 -0.555270969592118 3.81691266434111e-06 -0.528753 0.006 -0.495299210414226 3.95577089961826e-05 -0.460874 0.000296959 REST-independent MRPS27 23107 ENSG00000113048 Q92552
MRPS31 -0.578993958780827 0.000115869415035434 -0.61011 0.00233451 -0.7198475419652 5.61967397719437e-07 -0.79887 0.000296959 REST-independent MRPS31 10240 ENSG00000102738 Q92665
MRPS36 -0.605753665984781 0.0050396996008661 -0.714098 0.000909465 -0.742453467606109 0.000283518513648582 -0.793121 0.000296959 REST-independent MRPS36 92259 ENSG00000134056;ENSG00000278461 P82909
MSX2 -0.99000315636767 2.24055604368562e-13 -0.804726 0.000909465 -1.01421125239157 3.15627360364194e-14 -0.869379 0.000296959 REST-independent MSX2 4488 ENSG00000120149 P35548
MTHFD1 -0.578056293743154 2.27295625435882e-08 -0.526573 0.006 -0.447801783277849 2.44998815236156e-05 -0.400924 0.00124625 REST-independent MTHFD1 4522 ENSG00000100714 P11586
MUS81 -0.590959439962357 0.000139354947767474 -0.645986 0.000909465 -0.757391340401729 3.19561047533861e-07 -0.820781 0.000296959 REST-independent MUS81 80198 ENSG00000172732 Q96NY9
MUT -0.768533076973094 9.08616471995988e-07 -0.647583 0.00353789 -0.588577772990324 0.00022927386159837 -0.494983 0.000296959 REST-independent MMUT 4594 ENSG00000146085 P22033
MYC -1.19600403742787 1.09252074621988e-24 -1.18381 0.000909465 -1.23481358555393 1.2011686198255e-26 -1.19371 0.000296959 REST-independent MYC 4609 ENSG00000136997 P01106
MYOM2 -1.13656505774861 0.000919185475794265 -1.09083 0.000909465 -1.15022962004585 0.000643273920982044 -1.15799 0.000296959 REST-independent MYOM2 9172 ENSG00000036448;ENSG00000274137 P54296
N4BP2L2 -0.512643149995856 0.00199900054422778 -0.465202 0.0329592 -0.541721612081855 0.000753257554506575 -0.535365 0.000296959 REST-independent N4BP2L2 10443 ENSG00000244754 Q92802
N6AMT1 -1.01291821601158 3.03253872911028e-08 -1.21194 0.000909465 -1.24715960785468 6.58723428850378e-12 -1.1695 0.000296959 REST-independent N6AMT1 29104 ENSG00000156239 Q9Y5N5
NAGK -0.821819204312527 3.40258688723688e-05 -0.693186 0.0016575 -0.833263302743818 1.94412945923713e-05 -0.938723 0.000296959 REST-independent NAGK 55577 ENSG00000124357 Q9UJ70
NAP1L2 -0.862052116935369 0.00017398791351218 -0.998386 0.000909465 -0.903392428306802 6.25316943913073e-05 -0.862042 0.000296959 REST-independent NAP1L2 4674 ENSG00000186462 Q9ULW6
NARS2 -0.528154599943488 0.000237583786929358 -0.453763 0.03835 -0.533971228887987 0.000155792400296568 -0.496738 0.000296959 REST-independent NARS2 79731 ENSG00000137513 Q96I59
NCAM1 -0.716883475969487 5.912387348655e-05 -0.716986 0.0016575 -0.886902372378152 2.72740588593763e-07 -0.678164 0.000296959 REST-independent NCAM1 4684 ENSG00000149294 P13591
NCAPD2 -0.575851500656798 8.91714563068228e-06 -0.539108 0.00353789 -0.361896010950862 0.00932355971732 -0.336479 0.00952857 REST-independent NCAPD2 9918 ENSG00000010292 Q15021
NCBP1 -0.892370373775103 3.85309655092113e-09 -0.914624 0.000909465 -0.819026991555248 5.72361121997652e-08 -0.823212 0.000296959 REST-independent NCBP1 4686 ENSG00000136937 Q09161
NCEH1 -0.480071452431912 0.0316229541922579 -0.585193 0.0102315 -0.661548968220412 0.0013495521482101 -0.625087 0.000296959 REST-independent NCEH1 57552 ENSG00000144959 Q6PIU2
NDUFA12 -0.500995235516914 0.0312349715885761 -0.448584 0.038753 -0.532120300200849 0.0165859832903959 -0.505063 0.000296959 REST-independent NDUFA12 55967 ENSG00000184752 Q9UI09
NDUFAF1 -1.15366985743116 2.09107985851283e-11 -1.06637 0.000909465 -1.23010689158656 5.24823491941622e-13 -1.23592 0.000296959 REST-independent NDUFAF1 51103 ENSG00000137806 Q9Y375
NDUFB3 -0.60070120588236 4.18595937769126e-05 -0.568228 0.00693636 -0.684840719185516 1.40480147236512e-06 -0.716304 0.000296959 REST-independent NDUFB3 4709 ENSG00000119013 O43676
NDUFB5 -0.460185350486984 0.0182310741396987 -0.463739 0.0363516 -0.557962692870163 0.00223509388536964 -0.537841 0.000296959 REST-independent NDUFB5 4711 ENSG00000136521 O43674
NECAP1 -0.503580314475551 0.00109188641563375 -0.482397 0.0234724 -0.337808745441655 0.0402670972041901 -0.338797 0.0048145 REST-independent NECAP1 25977 ENSG00000089818 Q8NC96
NEK1 -0.778380319130854 4.26224824535719e-05 -0.783555 0.000909465 -0.536237952915097 0.00706811588804961 -0.506942 0.000296959 REST-independent NEK1 4750 ENSG00000137601 Q96PY6
NEK2 -0.443204321387356 0.00310828473665079 -0.447713 0.0332019 -0.42616369613579 0.00390430503794528 -0.396709 0.000296959 REST-independent NEK2 4751 ENSG00000117650 P51955
NEMF -0.56573980898915 0.001307219625276 -0.54976 0.00909685 -0.391598414723765 0.0359785194656509 -0.376856 0.0007968 REST-independent NEMF 9147 ENSG00000165525 O60524
NEURL4 -0.505328948180239 6.08580282513392e-05 -0.463314 0.0263862 -0.442172635620059 0.000484548959624369 -0.381794 0.00102747 REST-independent NEURL4 84461 ENSG00000215041;ENSG00000288301 Q96JN8
NFS1 -0.925948404713684 1.09302332324468e-08 -0.889508 0.0324863 -0.492187777971847 0.00467893179681506 -0.524847 0.00737778 REST-independent NFS1 9054 ENSG00000244005 Q9Y697
NIF3L1 -0.527075691938151 0.000315890900726848 -0.446883 0.0482182 -0.644916662807167 4.20687910985165e-06 -0.595252 0.000296959 REST-independent NIF3L1 60491 ENSG00000196290 Q9GZT8
NKX2-8 -1.16588025113099 0.0461885226615108 -1.16206 0.00693636 -1.15462215217473 0.0419745520886119 -1.33899 0.0007968 REST-independent NKX2-8 26257 ENSG00000136327 O15522
NMD3 -0.629291422313593 1.51812909861517e-05 -0.603618 0.00403448 -0.499757371651541 0.000774325683484119 -0.539223 0.000296959 REST-independent NMD3 51068 ENSG00000169251 Q96D46
NMNAT1 -0.679545392801672 0.00351809480604564 -0.55181 0.0196202 -0.60749776157586 0.00854057227839977 -0.477108 0.00448649 REST-independent NMNAT1 64802 ENSG00000173614 Q9HAN9
NMNAT2 -0.837721208896527 4.61865894786964e-05 -0.745511 0.000909465 -0.441580094625534 0.0490461333872177 -0.381425 0.00800438 REST-independent NMNAT2 23057 ENSG00000157064 Q9BZQ4
NOA1 -0.488268943066446 0.000249297068214722 -0.480212 0.01899 -0.433160511793973 0.00120626397284662 -0.422847 0.000296959 REST-independent NOA1 84273 ENSG00000084092 Q8NC60
NOC2L -0.477341394829358 0.000777437781582204 -0.48303 0.0292182 -0.469247482399831 0.000782190756780616 -0.446028 0.0018777 REST-independent NOC2L 26155 ENSG00000188976 Q9Y3T9
NOC3L -0.408901690437884 0.00486780502296844 -0.440976 0.0367597 -0.395906238562476 0.00557706506043084 -0.397627 0.0007968 REST-independent NOC3L 64318 ENSG00000173145 Q8WTT2
NOC4L -0.554729179507784 0.00146736470289971 -0.504145 0.0180551 -0.647064315246887 0.00010389349056877 -0.688031 0.000296959 REST-independent NOC4L 79050 ENSG00000288146;ENSG00000184967 Q9BVI4
NOL11 -0.433187439912751 0.000260470541647665 -0.436247 0.0269033 -0.445412564752395 0.000124904454895189 -0.451826 0.000558687 REST-independent NOL11 25926 ENSG00000130935 Q9H8H0
NOL6 -0.395022938199761 0.00429074979764554 -0.439314 0.03835 -0.367684995794129 0.00734835425261542 -0.332047 0.00579575 REST-independent NOL6 65083 ENSG00000165271 Q9H6R4
NOL8 -0.871454492969033 1.63636475779163e-10 -0.814807 0.000909465 -0.956969083142287 7.55827638577915e-13 -0.946986 0.000296959 REST-independent NOL8 55035 ENSG00000198000 Q76FK4
NPM3 -0.954721494536063 6.22103658022772e-07 -0.90976 0.000909465 -0.856977604721752 7.523485208273e-06 -0.871525 0.000296959 REST-independent NPM3 10360 ENSG00000107833 O75607
NQO2 -0.45220605563617 0.0360270453067023 -0.447912 0.0488779 -0.689585554077539 0.000364139135015739 -0.644846 0.000296959 REST-independent NQO2 4835 ENSG00000124588 P16083
NR2F1 -1.07318252599387 5.10619579497022e-17 -1.07304 0.000909465 -1.0054208309835 2.61573982161119e-15 -0.975588 0.000296959 REST-independent NR2F1 7025 ENSG00000175745 P10589
NR2F2 -0.505690005678357 0.002245473098477 -0.522005 0.00943399 -0.490535954726879 0.00260836234883637 -0.480522 0.000296959 REST-independent NR2F2 7026 ENSG00000185551 P24468
NR5A2 -0.801368267551522 0.0150655098420491 -0.732435 0.00865253 -1.25912106450101 7.08762850555626e-05 -1.09324 0.000296959 REST-independent NR5A2 2494 ENSG00000116833 O00482
NRXN3 -1.28564770287118 6.57459381701431e-08 -1.11705 0.000909465 -1.07645382783736 5.67742209842595e-06 -0.84513 0.000296959 REST-independent NRXN3 9369 ENSG00000021645 Q9HDB5;Q9Y4C0
NSMCE1 -1.04210018406601 3.20790388644332e-10 -0.997285 0.000909465 -1.16101038444505 1.21669594065857e-12 -1.31461 0.000296959 REST-independent NSMCE1 197370 ENSG00000169189 Q8WV22
NSUN6 -1.162841757807 1.49227549561668e-10 -1.25414 0.000909465 -1.01081373845235 1.49812622788149e-08 -1.16928 0.000296959 REST-independent NSUN6 221078 ENSG00000241058 Q8TEA1
NT5C2 -0.489743902764467 0.00104241383697068 -0.525363 0.00648843 -0.333478684023419 0.0355531102985309 -0.38186 0.00207861 REST-independent NT5C2 22978 ENSG00000076685 P49902
NUDCD1 -0.649028842224895 5.64431444097251e-06 -0.641735 0.000909465 -0.719969627274612 2.31212356198878e-07 -0.729365 0.000296959 REST-independent NUDCD1 84955 ENSG00000120526 Q96RS6
NUDT9 -0.781517187531963 1.14945140937442e-05 -0.795388 0.000909465 -0.52319858121635 0.00464273796530194 -0.649915 0.000296959 REST-independent NUDT9 53343 ENSG00000170502 Q9BW91
NUP35 -0.704568677967374 2.42647687402986e-05 -0.675401 0.00353789 -0.716695152768986 1.23068228651536e-05 -0.695377 0.000296959 REST-independent NUP35 129401 ENSG00000163002 Q8NFH5
NUP37 -0.785371956457551 4.93332447449034e-07 -0.737651 0.000909465 -0.780521024842809 3.974619734385e-07 -0.743344 0.000296959 REST-independent NUP37 79023 ENSG00000075188 Q8NFH4
NUP43 -0.473315644892244 0.000710080916883497 -0.479212 0.0192947 -0.441962191651116 0.00147634965123805 -0.48562 0.000296959 REST-independent NUP43 348995 ENSG00000120253 Q8NFH3
NUP93 -0.397513783139626 0.0022190819358886 -0.408605 0.0446516 -0.586449853789308 8.24414848113892e-07 -0.542862 0.000296959 REST-independent NUP93 9688 ENSG00000102900 Q8N1F7
NXN -0.591973753314089 1.0991763095943e-05 -0.584564 0.0016575 -0.593968695256131 7.15341695240449e-06 -0.58329 0.000296959 REST-independent NXN 64359 ENSG00000167693;ENSG00000281300;ENSG00000280563 Q6DKJ4
OAF -0.914589208702488 5.58566950509047e-10 -0.851583 0.000909465 -1.15962558551392 7.826542142461e-16 -1.13871 0.000296959 REST-independent OAF 220323 ENSG00000184232 Q86UD1
OGDH -1.10890782085355 3.63658726306694e-15 -1.00865 0.000909465 -0.913382346468952 8.61721663635005e-11 -0.926183 0.000296959 REST-independent OGDH 4967 ENSG00000105953 Q02218
OLFML2B -1.09934754245016 0.0218024023035251 -1.38508 0.000909465 -1.37235540223481 0.00337223905849234 -1.51861 0.000296959 REST-independent OLFML2B 25903 ENSG00000162745 Q68BL8
OMA1 -1.60142951273649 4.5445707461263e-20 -1.5439 0.000909465 -1.43176354423154 7.07880795704172e-17 -1.46527 0.000296959 REST-independent OMA1 115209 ENSG00000162600 Q96E52
OSGEP -0.548406961980723 0.00138322653609038 -0.473497 0.0282745 -0.523513598370549 0.00200252459411797 -0.568313 0.000296959 REST-independent OSGEP 55644 ENSG00000092094 Q9NPF4
OTUD6B -0.528292487122847 0.0393012893596836 -0.492074 0.0249191 -0.536536918546318 0.0298850577769365 -0.570408 0.000296959 REST-independent OTUD6B 51633 ENSG00000155100 Q8N6M0
PABPC4 -0.564479203760786 1.13981725869003e-07 -0.555313 0.00504662 -0.321019789400694 0.00566288334186775 -0.324774 0.0129935 REST-independent PABPC4 8761 ENSG00000090621 Q13310
PALM3 -1.54319631916141 3.32032303183293e-07 -1.50832 0.000909465 -2.21001575426791 1.9718242122741e-12 -2.13039 0.000296959 REST-independent PALM3 342979 ENSG00000187867;ENSG00000288318 A6NDB9
PAPSS1 -0.561666505915554 1.71722249109013e-05 -0.517425 0.0123925 -0.525329502777671 5.21698570647219e-05 -0.484703 0.000296959 REST-independent PAPSS1 9061 ENSG00000138801 O43252
PARPBP -0.463883078116588 0.0245041352888923 -0.528962 0.0225537 -0.471277856336819 0.0181802394339459 -0.357706 0.010581 REST-independent PARPBP 55010 ENSG00000185480 Q9NWS1
PBX1 -1.45115243662577 1.29025804146501e-12 -1.45446 0.000909465 -1.3009851299283 1.57893655803617e-10 -1.2971 0.000296959 REST-independent PBX1 5087 ENSG00000185630 P40424
PBX3 -0.861583911590204 3.0180622037826e-08 -0.844255 0.000909465 -0.83872884649012 4.90952217799241e-08 -0.808343 0.000296959 REST-independent PBX3 5090 ENSG00000167081 P40426
PC -1.11556627534594 2.84119706321059e-15 -1.07179 0.0147234 -1.29936562255699 2.80374713925432e-20 -1.17248 0.000296959 REST-independent PC 5091 ENSG00000173599 P11498
PCCA -0.749810053631784 1.98575332833073e-05 -0.773888 0.00353789 -0.639538423041527 0.000268168334968954 -0.725695 0.000296959 REST-independent PCCA 5095 ENSG00000175198 P05165
PCDH9 -0.755096984813926 0.000104590562748188 -0.70246 0.000909465 -0.490042965445303 0.0179334919831802 -0.46076 0.000296959 REST-independent PCDH9 5101 ENSG00000184226 Q9HC56
PCSK7 -0.615874430988184 8.93727346630398e-05 -0.600437 0.00454554 -0.562468862147947 0.000328894109537924 -0.559795 0.000296959 REST-independent PCSK7 9159 ENSG00000160613 Q16549
PCYT1A -0.649880457252423 0.00100498845700507 -0.506324 0.0258166 -0.717566274819169 0.000184807301524975 -0.648495 0.000296959 REST-independent PCYT1A 5130 ENSG00000161217 P49585
PDCD11 -0.717686852448998 5.00568119703442e-09 -0.658199 0.000909465 -0.534087466040518 2.39954961062558e-05 -0.496764 0.000296959 REST-independent PDCD11 22984 ENSG00000148843 Q14690
PDE4A -0.877397917356512 3.603599953326e-08 -0.982443 0.000909465 -0.460810310804752 0.00589393520957904 -0.522284 0.000296959 REST-independent PDE4A 5141 ENSG00000065989 P27815
PDE4DIP -0.663040975166442 2.52392587233847e-05 -0.595899 0.00353789 -0.6335171971528 4.92985324163351e-05 -0.555633 0.000296959 REST-independent PDE4DIP 9659 ENSG00000178104 Q5VU43
PDGFC -0.508351881591857 0.010334974855511 -0.502409 0.0292182 -0.913489711340132 5.01074669699853e-07 -0.87766 0.000296959 REST-independent PDGFC 56034 ENSG00000145431 Q9NRA1
PEX1 -0.647822156907666 2.23935288243754e-05 -0.622976 0.00233451 -0.695112739191219 3.09057991786643e-06 -0.55747 0.000296959 REST-independent PEX1 5189 ENSG00000127980 O43933
PEX12 -1.08005523616795 0.00297020250233807 -1.07161 0.000909465 -1.12093725865474 0.00161514745475122 -1.02416 0.000296959 REST-independent PEX12 5193 ENSG00000108733 O00623
PEX6 -1.09406765476444 2.52763066718712e-06 -1.17061 0.000909465 -0.826435270006776 0.000385805413341698 -1.11021 0.000296959 REST-independent PEX6 5190 ENSG00000124587 Q13608
PFAS -0.571463026449803 6.62017404608635e-06 -0.578691 0.00233451 -0.408518539679577 0.00206244746805885 -0.421941 0.0007968 REST-independent PFAS 5198 ENSG00000178921 O15067
PFDN6 -0.589906978151274 0.00352158616948401 -0.602676 0.00233451 -0.68040653699969 0.000420744084545945 -0.747997 0.000296959 REST-independent PFDN6 10471 ENSG00000235692;ENSG00000224782;ENSG00000204220;ENSG00000206283;ENSG00000237335 O15212
PFKM -0.587928076662365 1.02144598447474e-06 -0.563524 0.00353789 -0.451784171796967 0.00025873552235097 -0.420944 0.00102747 REST-independent PFKM 5213 ENSG00000152556 P08237
PGD -0.450365238460428 0.000363014681167304 -0.417282 0.038753 -0.497840085825985 4.43789782640627e-05 -0.48119 0.000296959 REST-independent PGD 5226 ENSG00000142657 P52209
PHF6 -0.627091143818584 0.0025459813792181 -0.560069 0.0140774 -0.640132845753018 0.00157309934972494 -0.584916 0.000296959 REST-independent PHF6 84295 ENSG00000156531 Q8IWS0
PHF8 -0.612103552824707 0.000452961093841298 -0.570229 0.00454554 -0.450927596128408 0.013220667275268 -0.446982 0.000296959 REST-independent PHF8 23133 ENSG00000172943 Q9UPP1
PHKB -0.699340545733951 2.269405689431e-07 -0.733902 0.000909465 -0.627481983992573 3.41634900986718e-06 -0.584851 0.000296959 REST-independent PHKB 5257 ENSG00000102893 Q93100
PHLDB2 -1.47834469626792 7.11635412196501e-09 -1.20099 0.000909465 -1.17341875488462 3.99310803658287e-06 -1.07898 0.000296959 REST-independent PHLDB2 90102 ENSG00000144824 Q86SQ0
PHLDB3 -0.619595543790195 0.01126404089984 -0.522508 0.0305727 -0.65888382439377 0.00518769080581268 -0.656957 0.000296959 REST-independent PHLDB3 653583 ENSG00000176531 Q6NSJ2
PHOSPHO1 -1.35650798292136 0.000771240415575807 -1.25083 0.000909465 -2.00998473959182 1.69669449600729e-06 -1.96269 0.000296959 REST-independent PHOSPHO1 162466 ENSG00000173868 Q8TCT1
PIAS4 -0.477585200614708 0.00474208040482213 -0.533214 0.0147234 -0.466905586669939 0.0049591362712604 -0.528045 0.000296959 REST-independent PIAS4 51588 ENSG00000105229 Q8N2W9
PIF1 -0.579175239474781 0.0085613648814863 -0.626794 0.010604 -0.76395300497908 0.000252735650197404 -0.796792 0.000296959 REST-independent PIF1 80119 ENSG00000140451 Q9H611
PIGK -0.568137632367994 0.000477775046832014 -0.531206 0.00693636 -0.394305054869065 0.0220036667273577 -0.37829 0.00228414 REST-independent PIGK 10026 ENSG00000142892 Q92643
PIGM -1.22515741169183 4.95762416948117e-15 -1.06701 0.000909465 -1.10671981386223 8.20211792225254e-13 -1.1117 0.000296959 REST-independent PIGM 93183 ENSG00000143315 Q9H3S5
PIK3R3 -0.585687175796443 9.71734646129698e-05 -0.552674 0.0078661 -0.336672693305857 0.0423078186001037 -0.322123 0.00722142 REST-independent PIK3R3 8503 ENSG00000117461 Q92569
PIK3R4 -0.787598392396583 1.4773725512071e-07 -0.721712 0.000909465 -0.609114265185576 7.04507264656873e-05 -0.604087 0.000296959 REST-independent PIK3R4 30849 ENSG00000196455 Q99570
PIP4K2A -0.529033639955154 0.000157278578315336 -0.49441 0.0202134 -0.376357356685258 0.0100670575144622 -0.391785 0.00207861 REST-independent PIP4K2A 5305 ENSG00000150867 P48426
PITPNC1 -0.604688434386952 0.0154877440288123 -0.578249 0.0112456 -0.678035765800439 0.004446279400428 -0.624986 0.000296959 REST-independent PITPNC1 26207 ENSG00000154217 Q9UKF7
PKNOX1 -0.561504914527904 0.00101033894027891 -0.512978 0.0174474 -0.497587408499955 0.00365092316276034 -0.45039 0.000296959 REST-independent PKNOX1 5316 ENSG00000160199 P55347
PKNOX2 -0.548712252444842 0.0148805064783877 -0.53802 0.0183472 -0.666359077150066 0.00171941411454071 -0.602042 0.000296959 REST-independent PKNOX2 63876 ENSG00000165495 Q96KN3
PKP4 -0.494227219407302 0.000790746373930316 -0.50095 0.0134079 -0.411601587881346 0.00594681476567319 -0.35926 0.00305388 REST-independent PKP4 8502 ENSG00000144283 Q99569
PLA2G4A -1.47198828176208 8.62473397778991e-19 -1.38305 0.000909465 -1.52464117564691 3.32016483017124e-20 -1.41385 0.000296959 REST-independent PLA2G4A 5321 ENSG00000116711 P47712
PLAA -0.543830405758829 8.6965845397945e-05 -0.600237 0.0140774 -0.548594405984229 5.71032169081433e-05 -0.462714 0.00102747 REST-independent PLAA 9373 ENSG00000137055 Q9Y263
PLAT -0.83265074556135 1.15623763728154e-08 -0.726611 0.000909465 -1.24166592127404 5.65678707509551e-18 -1.25733 0.000296959 REST-independent PLAT 5327 ENSG00000104368 P00750
PLAU -1.0139144875894 0.0337485910852509 -0.773705 0.0137838 -1.36827241577594 0.00283851091872504 -1.18987 0.000296959 REST-independent PLAU 5328 ENSG00000122861 P00749
PLCB3 -0.515880640412554 0.000171634940782912 -0.469698 0.0275332 -0.319692961347812 0.0309981279308076 -0.269902 0.0288696 REST-independent PLCB3 5331 ENSG00000149782 Q01970
PLCG2 -0.627165073209239 0.00534522734945775 -0.631549 0.00693636 -0.467301852339653 0.0443025109816724 -0.530237 0.000296959 REST-independent PLCG2 5336 ENSG00000197943 P16885
PLD1 -0.934225447846962 0.000119040694937315 -0.741247 0.0016575 -0.844872392758585 0.000436288356498959 -0.58402 0.000558687 REST-independent PLD1 5337 ENSG00000075651 Q13393
PLEKHG2 -0.493328511844229 0.00186820168967775 -0.473584 0.0265939 -0.452614698951837 0.00411367509214445 -0.414084 0.000296959 REST-independent PLEKHG2 64857 ENSG00000090924 Q9H7P9
PLEKHH3 -0.624944293677852 0.000378274449872535 -0.560743 0.00824627 -0.554536916697359 0.00164077427216869 -0.475803 0.000296959 REST-independent PLEKHH3 79990 ENSG00000068137 Q7Z736
PLXNA2 -0.715268101801452 0.00106981622241144 -0.779955 0.000909465 -0.656931511637557 0.0024560658459964 -0.652385 0.000296959 REST-independent PLXNA2 5362 ENSG00000076356 O75051
PML -0.630277956780497 7.74656638008961e-06 -0.567386 0.0160124 -0.512808759546978 0.000315369622727009 -0.476286 0.00102747 REST-independent PML 5371 ENSG00000140464 P29590
PMVK -0.806549307771639 4.44919529889296e-05 -0.723643 0.000909465 -0.86265832970699 7.62108071736947e-06 -0.860333 0.000296959 REST-independent PMVK 10654 ENSG00000163344 Q15126
PNPLA6 -0.847989535578207 1.09318208115972e-08 -0.831115 0.000909465 -0.69099489198935 3.84441038475585e-06 -0.676743 0.000296959 REST-independent PNPLA6 10908 ENSG00000032444 Q8IY17
POGLUT1 -0.496982262158553 0.0166586964984386 -0.475551 0.030895 -0.497071103439256 0.01366342148683 -0.45112 0.000296959 REST-independent POGLUT1 56983 ENSG00000163389 Q8NBL1
POGZ -0.464621722294524 0.00351809480604564 -0.438489 0.0337352 -0.436913340480229 0.00555447891902531 -0.413273 0.00167134 REST-independent POGZ 23126 ENSG00000143442 Q7Z3K3
POLA1 -0.656362179773475 3.90336305304602e-07 -0.589609 0.000909465 -0.522399115878675 7.79003848626522e-05 -0.456423 0.000296959 REST-independent POLA1 5422 ENSG00000101868 P09884
POLG2 -0.495021231794347 0.0162291349140487 -0.518563 0.0223219 -0.452623588435057 0.0261714977678364 -0.510783 0.0007968 REST-independent POLG2 11232 ENSG00000256525 Q9UHN1
POLR1E -0.512201475763874 0.000121730192522076 -0.447616 0.0340264 -0.470682286686038 0.000398038382337013 -0.391709 0.00102747 REST-independent POLR1E 64425 ENSG00000137054 Q9GZS1
POLR3B -0.623577207002249 0.000261127152497182 -0.624426 0.0102315 -0.587719938415184 0.000525581805640618 -0.55742 0.000296959 REST-independent POLR3B 55703 ENSG00000013503 Q9NW08
POP5 -0.957581498874047 7.69507455796428e-09 -0.790984 0.000909465 -0.877228838992157 1.01194648372002e-07 -0.916328 0.000296959 REST-independent POP5 51367 ENSG00000167272 Q969H6
POU3F2 -0.895808876351496 1.63622281122614e-06 -0.930499 0.000909465 -0.730622860666839 0.000112200917875963 -0.780904 0.000296959 REST-independent POU3F2 5454 ENSG00000184486 P20265
PPA1 -0.456779157111074 0.000285205811882082 -0.413417 0.0442206 -0.48301530602429 8.24082085283295e-05 -0.4812 0.000296959 REST-independent PPA1 5464 ENSG00000180817 Q15181
PPA2 -0.470432898891052 0.000989858215989901 -0.429419 0.0373983 -0.570724821970696 2.56019277972995e-05 -0.59203 0.000296959 REST-independent PPA2 27068 ENSG00000138777 Q9H2U2
PPAP2B -0.495026995798637 0.00974105957872414 -0.453566 0.0456502 -0.544944692036171 0.00302035744772664 -0.557818 0.000558687 REST-independent PLPP3 8613 ENSG00000162407 O14495
PPAPDC2 -0.798780872981309 7.88194082426078e-06 -0.7439 0.000909465 -0.853393737180347 1.21709981337176e-06 -0.839497 0.000296959 REST-independent PLPP6 403313 ENSG00000205808 Q8IY26
PPID -0.891262295883571 1.46133170895191e-13 -0.811553 0.000909465 -1.05485211904947 5.76690766075056e-19 -0.991429 0.000296959 REST-independent PPID 5481 ENSG00000171497 Q08752
PPM1J -0.824140966366545 0.00278779040682228 -0.773715 0.00233451 -0.878275954674098 0.00112382710067422 -0.916258 0.000296959 REST-independent PPM1J 333926 ENSG00000155367 Q5JR12
PPP1R18 -0.770651908329567 0.000701234420826443 -0.741115 0.00296644 -0.718342155837028 0.00140047491715061 -0.725422 0.000296959 REST-independent PPP1R18 170954 ENSG00000229998;ENSG00000230341;ENSG00000234000;ENSG00000206485;ENSG00000231247;ENSG00000225060;ENSG00000146112;ENSG00000236428 Q6NYC8
PPP1R7 -0.569953823133435 0.00129034841012074 -0.535543 0.0102315 -0.709439886264031 2.24159664466687e-05 -0.679915 0.000296959 REST-independent PPP1R7 5510 ENSG00000115685 Q15435
PPP2R5A -0.509499440528125 0.000269403336373436 -0.557806 0.00693636 -0.354451367577983 0.0161294988814797 -0.395747 0.000558687 REST-independent PPP2R5A 5525 ENSG00000066027 Q15172
PPWD1 -0.524363630598622 0.000744754283926283 -0.441498 0.0400169 -0.455956081560191 0.00354719497471863 -0.38723 0.00167134 REST-independent PPWD1 23398 ENSG00000113593 Q96BP3
PRICKLE3 -0.625957375585794 0.000557858804702352 -0.608278 0.00504662 -0.430011909852971 0.0225751215871661 -0.497629 0.000558687 REST-independent PRICKLE3 4007 ENSG00000012211 O43900
PRIM2 -0.647463624740188 6.50500273629004e-06 -0.504933 0.0174474 -0.602943509344593 2.35847855370656e-05 -0.525373 0.000296959 REST-independent PRIM2 5558 ENSG00000146143 P49643
PRKACB -0.715639365441983 0.00017398791351218 -0.625665 0.000909465 -0.726868110499429 0.000103658823397236 -0.75754 0.000296959 REST-independent PRKACB 5567 ENSG00000142875 P22694
PRKCA -0.650884249762134 0.0026500836183399 -0.584621 0.00403448 -0.479533386184208 0.0340538668682378 -0.420067 0.000558687 REST-independent PRKCA 5578 ENSG00000154229 P17252
PRKX -0.397376143890807 0.0168702011649981 -0.506278 0.0177816 -0.345674263191567 0.0386849957396488 -0.343462 0.00413321 REST-independent PRKX 5613 ENSG00000183943 P51817
PRMT5 -0.488626344139076 6.40859599771038e-05 -0.444855 0.0249191 -0.49631698798531 3.50916031472281e-05 -0.477355 0.000296959 REST-independent PRMT5 10419 ENSG00000100462 O14744
PROSC -0.561976525976028 2.29593157934734e-05 -0.489743 0.0225537 -0.727367186660194 9.48840772594966e-09 -0.648921 0.000296959 REST-independent PLPBP 11212 ENSG00000147471 O94903
PRPF3 -0.611991127342219 2.16554366900418e-06 -0.536552 0.00454554 -0.416809091852497 0.00207009820103213 -0.471877 0.000296959 REST-independent PRPF3 9129 ENSG00000117360 O43395
PRPF6 -0.554005194541417 0.000294183729633018 -0.486842 0.0171318 -0.578685125888299 0.000107553795398531 -0.555217 0.000296959 REST-independent PRPF6 24148 ENSG00000101161 O94906
PRPSAP1 -0.552515899198203 3.34552219691701e-05 -0.436472 0.0346267 -0.412504174186967 0.00270455860108028 -0.380716 0.00167134 REST-independent PRPSAP1 5635 ENSG00000161542 Q14558
PSMB10 -0.586759565049518 0.025529787524758 -0.504428 0.0439729 -0.624420173750931 0.0131133839949407 -0.730139 0.000296959 REST-independent PSMB10 5699 ENSG00000205220 P40306
PSMB9 -1.98080767873991 0.0107542706424979 -1.84114 0.0409416 -2.51212131636371 0.00159254376481826 -2.29559 0.0217606 REST-independent PSMB9 5698 ENSG00000240065;ENSG00000243958;ENSG00000239836;ENSG00000243594;ENSG00000240508;ENSG00000243067;ENSG00000240118;ENSG00000242711 P28065
PSME2 -0.470156753101625 0.0457631835147549 -0.464152 0.0322901 -0.519767089226087 0.0191933551114289 -0.576213 0.000296959 REST-independent PSME2 5721 ENSG00000284889;ENSG00000100911 Q9UL46
PTCD3 -0.649410095901142 1.06955151118011e-06 -0.619825 0.000909465 -0.459383716870695 0.000940691592327531 -0.426086 0.000558687 REST-independent PTCD3 55037 ENSG00000132300 Q96EY7
PTMS -0.449655969521672 0.0310694532404927 -0.434383 0.0324863 -0.537316447185567 0.00555331090947095 -0.526337 0.000296959 REST-independent PTMS 5763 ENSG00000159335 P20962
QPRT -0.6123564105237 0.000233760699536224 -0.450622 0.043745 -0.430890542641021 0.0126721246871607 -0.411662 0.00167134 REST-independent QPRT 23475 ENSG00000103485 Q15274
QTRT1 -0.445797459257177 0.0224121478221547 -0.494724 0.0243862 -0.535792228374745 0.00340003173824181 -0.523219 0.000296959 REST-independent QTRT1 81890 ENSG00000213339 Q9BXR0
RAD23A -0.483427984365113 0.00219997504235383 -0.479674 0.0171318 -0.341776385183277 0.0411182102360314 -0.356297 0.00529474 REST-independent RAD23A 5886 ENSG00000179262 P54725
RAD51B -0.765010957339587 0.0122156192077194 -0.579284 0.0491111 -1.37692011261866 2.73254958563203e-06 -0.982615 0.000296959 REST-independent RAD51B 5890 ENSG00000182185 O15315
RANBP6 -0.851009275556359 5.64431444097251e-06 -0.61984 0.00353789 -0.708359806197346 0.00018128077524329 -0.472901 0.000296959 REST-independent RANBP6 26953 ENSG00000137040 O60518
RARS -0.451329022468133 0.000579415852889569 -0.405987 0.0473355 -0.500689247400161 7.5976782456076e-05 -0.488127 0.000296959 REST-independent RARS1 5917 ENSG00000113643 P54136
RBM10 -0.410056361900667 0.00560916192264711 -0.448653 0.0277773 -0.418733985265528 0.00361844446430982 -0.47307 0.000296959 REST-independent RBM10 8241 ENSG00000182872 P98175
RBM19 -0.576950260968978 2.7287554356545e-05 -0.477876 0.0240882 -0.443035199745011 0.00172390753476082 -0.436221 0.000296959 REST-independent RBM19 9904 ENSG00000122965 Q9Y4C8
RBPMS -0.724998337219088 8.6204440267373e-05 -0.71568 0.00233451 -0.95744289513926 1.14055311004098e-07 -0.975466 0.000296959 REST-independent RBPMS 11030 ENSG00000157110 Q93062
REXO2 -0.745931985112603 2.76208667942274e-06 -0.695262 0.000909465 -0.867348104886158 1.81861193542726e-08 -0.825737 0.000296959 REST-independent REXO2 25996 ENSG00000076043 Q9Y3B8
RGL1 -0.943883206110586 9.52446086553196e-05 -0.917354 0.000909465 -0.647741517870305 0.00851800367148926 -0.470513 0.00497304 REST-independent RGL1 23179 ENSG00000143344 Q9NZL6
RGMA -0.633457593881498 0.00018654360409045 -0.616802 0.00296644 -0.587328823724266 0.000490493487330795 -0.546025 0.000296959 REST-independent RGMA 56963 ENSG00000182175 Q96B86
RHBDF2 -0.676716634721392 0.00026435471858141 -0.627034 0.00454554 -0.48645128379092 0.0111013080520179 -0.424445 0.00146148 REST-independent RHBDF2 79651 ENSG00000129667 Q6PJF5
RHOT1 -0.559160074772024 0.000547691262676587 -0.50394 0.0202134 -0.356028365446671 0.0397392591409494 -0.3902 0.0018777 REST-independent RHOT1 55288 ENSG00000126858 Q8IXI2
RMND1 -0.561546741723547 9.83973180271861e-05 -0.550784 0.0109013 -0.541169873625519 0.000150977774960254 -0.542512 0.000296959 REST-independent RMND1 55005 ENSG00000155906 Q9NWS8
RNASEH2A -0.430365558500918 0.0350893242014687 -0.445765 0.0373983 -0.5295731536434 0.00497667123093532 -0.587012 0.000296959 REST-independent RNASEH2A 10535 ENSG00000104889 O75792
RNASEL -1.3293107025017 3.37551779881162e-07 -1.31947 0.000909465 -1.01496000645906 8.26539338580936e-05 -1.06138 0.000296959 REST-independent RNASEL 6041 ENSG00000135828 Q05823
RPAP1 -0.668113252140547 4.58238232994142e-07 -0.649298 0.000909465 -0.529975569490092 8.3857653518075e-05 -0.463066 0.000296959 REST-independent RPAP1 26015 ENSG00000103932 Q9BWH6
RPP40 -0.69942262848934 0.000200568677174267 -0.658906 0.00403448 -0.61720741035675 0.000996659676477712 -0.553819 0.000296959 REST-independent RPP40 10799 ENSG00000124787 O75818
RPS27L -0.603392482682242 0.0262890414666164 -0.585753 0.00648843 -0.830128889793265 0.000834280509523408 -0.84117 0.000296959 REST-independent RPS27L 51065 ENSG00000185088 Q71UM5
RPS6KA1 -0.573838241420153 1.48133864801101e-05 -0.503809 0.0157545 -0.459107156406223 0.000659693371504935 -0.433439 0.000296959 REST-independent RPS6KA1 6195 ENSG00000117676;ENSG00000281877 Q15418
RRP12 -0.563750273323885 3.85311586926179e-05 -0.546644 0.00554039 -0.64727708807249 9.61929493909475e-07 -0.608942 0.000296959 REST-independent RRP12 23223 ENSG00000052749 Q5JTH9
RRP15 -0.420339089184162 0.00525936264982109 -0.428439 0.0420653 -0.505327142673296 0.000378739545153231 -0.447791 0.000296959 REST-independent RRP15 51018 ENSG00000067533 Q9Y3B9
RRP9 -0.585724718144516 0.000752987208016808 -0.484138 0.0277773 -0.68571373164355 3.9134310701027e-05 -0.70701 0.000296959 REST-independent RRP9 9136 ENSG00000114767 O43818
RRS1 -0.586831027576446 5.38089519592874e-05 -0.574907 0.00454554 -0.60301191212244 2.30386565946368e-05 -0.646126 0.000296959 REST-independent RRS1 23212 ENSG00000179041 Q15050
RSAD1 -0.640388746976308 1.98174875989407e-06 -0.679318 0.000909465 -0.502315635697934 0.000261700224760122 -0.501388 0.000296959 REST-independent RSAD1 55316 ENSG00000136444 Q9HA92
RSPRY1 -0.842915841393337 1.49548637322333e-07 -0.856396 0.000909465 -0.484150121411823 0.00438596163874883 -0.441271 0.00146148 REST-independent RSPRY1 89970 ENSG00000159579 Q96DX4
RSRC1 -0.502590117675322 0.00720400520058838 -0.550798 0.0123925 -0.485778870373581 0.00813486239084948 -0.524902 0.000296959 REST-independent RSRC1 51319 ENSG00000174891 Q96IZ7
RSU1 -0.62145997228008 6.90967862522701e-06 -0.594159 0.0016575 -0.646851740447618 1.74948925782942e-06 -0.600416 0.000296959 REST-independent RSU1 6251 ENSG00000148484 Q15404
RTKN2 -0.49389609943364 0.0499093404026129 -0.444999 0.0486881 -0.678606083825555 0.002813133483499 -0.592573 0.000296959 REST-independent RTKN2 219790 ENSG00000182010 Q8IZC4
RTN1 -0.855582286743493 0.000133190549060904 -0.862969 0.000909465 -1.03953577356248 2.16367411062123e-06 -0.967181 0.000296959 REST-independent RTN1 6252 ENSG00000139970 Q16799
RTN4IP1 -0.509541940654387 0.0426987183423311 -0.511034 0.0346267 -0.512959721146048 0.0348482416322976 -0.643469 0.000296959 REST-independent RTN4IP1 84816 ENSG00000130347 Q8WWV3
RUFY1 -0.694395521253243 4.93744913127236e-07 -0.690257 0.000909465 -0.795689676710335 3.16333840188126e-09 -0.765955 0.000296959 REST-independent RUFY1 80230 ENSG00000284260;ENSG00000176783 Q96T51
RUVBL1 -0.509218199958944 0.00078607289265458 -0.470494 0.0192947 -0.757738075714797 5.37617651430392e-08 -0.695904 0.000296959 REST-independent RUVBL1 8607 ENSG00000284901;ENSG00000175792 Q9Y265
SAMHD1 -1.18858039885678 4.66278371600767e-14 -1.11912 0.000909465 -1.01677430098749 1.08017319134439e-10 -0.983195 0.000296959 REST-independent SAMHD1 25939 ENSG00000101347 Q9Y3Z3
SAMM50 -0.446011401836625 0.00826931335738974 -0.444768 0.0343929 -0.430237926428896 0.00942157796871632 -0.425121 0.000558687 REST-independent SAMM50 25813 ENSG00000100347 Q9Y512
SCFD2 -1.60907028426459 1.34680065512834e-25 -1.5366 0.000909465 -1.38608624596943 2.41794035547446e-20 -1.26929 0.000296959 REST-independent SCFD2 152579 ENSG00000184178 Q8WU76
SCRIB -0.663511159654904 2.23283453140051e-07 -0.629002 0.000909465 -0.447043661446049 0.000921603182941256 -0.42722 0.000296959 REST-independent SCRIB 23513 ENSG00000274287;ENSG00000180900 Q14160
SDAD1 -0.772447109567388 2.05455343890822e-10 -0.807515 0.000909465 -0.659391971767808 5.99308926996032e-08 -0.686495 0.000296959 REST-independent SDAD1 55153 ENSG00000198301 Q9NVU7
SDF2 -0.545622325841148 0.00920358812470903 -0.630065 0.00865253 -0.683057016517835 0.00055117464794918 -0.826592 0.000296959 REST-independent SDF2 6388 ENSG00000132581 Q99470
SEC23IP -0.518527962524097 0.0017632149607803 -0.490332 0.0151289 -0.358298577385716 0.0426274338519961 -0.331428 0.00952857 REST-independent SEC23IP 11196 ENSG00000107651 Q9Y6Y8
SECISBP2 -0.402604914150505 0.00406104038576998 -0.445075 0.0350901 -0.483685743271844 0.0002661456810607 -0.528287 0.000296959 REST-independent SECISBP2 79048 ENSG00000187742 Q96T21
SEMA3A -0.856431436755361 0.00747222568083138 -0.611036 0.0180551 -0.905994077542256 0.00361706921987969 -0.776993 0.000558687 REST-independent SEMA3A 10371 ENSG00000075213 Q14563
SEMA3E -0.726169371195058 0.0142225238052875 -0.851719 0.000909465 -0.967408519641014 0.000658060930064371 -0.806551 0.000296959 REST-independent SEMA3E 9723 ENSG00000170381 O15041
SENP7 -0.764967101787734 0.00170650368710654 -0.815186 0.000909465 -0.511348794685653 0.0465251356723557 -0.62044 0.000296959 REST-independent SENP7 57337 ENSG00000138468 Q9BQF6
SEPX1 -0.639608183737396 0.0013542550798251 -0.609587 0.00353789 -0.837117939904435 8.51049398426182e-06 -0.847753 0.000296959 REST-independent MSRB1 51734 ENSG00000198736 Q9NZV6
SERPINI1 -1.6360310448829 7.97491732797968e-10 -1.70968 0.000909465 -1.41780061729189 3.95994060577365e-08 -1.38924 0.000296959 REST-independent SERPINI1 5274 ENSG00000163536 Q99574
SERTM1 -0.944389584685097 0.00280333412288405 -0.979685 0.000909465 -1.19163700290247 0.00010688274233074 -1.46759 0.000296959 REST-independent SERTM1 400120 ENSG00000180440 A2A2V5
SETDB2 -0.783125686063245 7.04425265075677e-05 -0.788308 0.000909465 -0.818967685301926 2.30386565946368e-05 -0.928365 0.000296959 REST-independent SETDB2 83852 ENSG00000136169 Q96T68
SFR1 -0.982028687957048 2.11265367077903e-05 -0.732204 0.00233451 -0.8210218934512 0.000314591467340262 -0.699621 0.000296959 REST-independent SFR1 119392 ENSG00000156384 Q86XK3
SGOL2 -0.453394761081807 0.02124090376842 -0.435107 0.0491111 -0.395167061085212 0.0458612935287379 -0.382207 0.0018777 REST-independent SGO2 151246 ENSG00000163535 Q562F6
SH3BP5 -0.524106290443181 0.000354791694445916 -0.49631 0.0395677 -0.534618155039333 0.000207085777183894 -0.439894 0.00146148 REST-independent SH3BP5 9467 ENSG00000131370 O60239
SHISA2 -0.957485198791498 2.09310415527916e-07 -1.06154 0.000909465 -1.41110859470735 2.71539411857948e-14 -1.50917 0.000296959 REST-independent SHISA2 387914 ENSG00000180730 Q6UWI4
SHQ1 -0.642574290796664 3.59383768295284e-06 -0.602088 0.000909465 -0.595164688695059 1.60162724088493e-05 -0.595127 0.000296959 REST-independent SHQ1 55164 ENSG00000144736 Q6PI26
SKAP2 -1.20913571877997 4.96746174870874e-17 -1.16173 0.000909465 -1.08462340564371 3.5047767894925e-14 -1.04171 0.000296959 REST-independent SKAP2 8935 ENSG00000005020 O75563
SLC10A4 -1.50912440616036 1.61637601861028e-06 -1.28482 0.000909465 -0.632837987383542 0.0447966959895114 -0.833807 0.000296959 REST-independent SLC10A4 201780 ENSG00000145248 Q96EP9
SLC12A9 -0.406332151257149 0.00969750453274642 -0.463925 0.0367597 -0.390768665505366 0.0111787161626664 -0.367353 0.00430902 REST-independent SLC12A9 56996 ENSG00000146828 Q9BXP2
SLC1A3 -1.20376751924307 1.03301706167977e-14 -1.15286 0.000909465 -1.33669942768399 3.37610516357067e-18 -1.33775 0.000296959 REST-independent SLC1A3 6507 ENSG00000079215 P43003
SLC25A12 -0.795922037843626 1.42216678129583e-07 -0.682902 0.000909465 -0.668905686849275 9.81986571933751e-06 -0.592408 0.000296959 REST-independent SLC25A12 8604 ENSG00000115840 O75746
SLC25A20 -0.587254187517713 0.00199938724150637 -0.534647 0.0211426 -0.400239962882332 0.0447966959895114 -0.533247 0.000296959 REST-independent SLC25A20 788 ENSG00000178537 O43772
SLC25A23 -0.583428068714301 1.66270117579731e-06 -0.515438 0.00943399 -0.406294861360457 0.0014665704837886 -0.380463 0.00286777 REST-independent SLC25A23 79085 ENSG00000125648 Q9BV35
SLC35A1 -0.699953804979057 0.000177960392367164 -0.642192 0.00504662 -0.584995396051428 0.00185108811714202 -0.574539 0.000296959 REST-independent SLC35A1 10559 ENSG00000164414 P78382
SLC35A4 -0.658970614031559 6.29588886512658e-08 -0.636432 0.0016575 -0.658495435132776 4.15781126383063e-08 -0.644535 0.000296959 REST-independent SLC35A4 113829 ENSG00000176087 L0R6Q1;Q96G79
SLC38A10 -0.702979977977221 2.79455100936447e-08 -0.730771 0.000909465 -0.73417579635296 3.57384944092181e-09 -0.680347 0.000296959 REST-independent SLC38A10 124565 ENSG00000157637 Q9HBR0
SLC38A6 -0.876440109659881 0.0017700854540888 -1.00603 0.000909465 -0.776582933619711 0.00510138624859662 -0.723821 0.000296959 REST-independent SLC38A6 145389 ENSG00000139974 Q8IZM9
SLC39A11 -0.822574835657093 1.17874531953091e-05 -0.817329 0.000909465 -1.00018445822679 5.75082981465286e-08 -0.86916 0.000296959 REST-independent SLC39A11 201266 ENSG00000282291;ENSG00000133195 Q8N1S5
SLC44A1 -0.509555233528641 0.0121264678903139 -0.536478 0.00909685 -0.476287916183897 0.0175709559498924 -0.448723 0.000296959 REST-independent SLC44A1 23446 ENSG00000070214 Q8WWI5
SLC5A6 -0.663918475579821 1.37416869457594e-08 -0.580295 0.0484755 -0.634979201267016 4.45787015479542e-08 -0.58251 0.000558687 REST-independent SLC5A6 8884 ENSG00000138074 Q9Y289
SLCO4C1 -0.926497312223373 0.010950579748643 -0.807824 0.00296644 -0.888927632585198 0.0126786892503863 -0.751208 0.000296959 REST-independent SLCO4C1 353189 ENSG00000173930 Q6ZQN7
SLIT2 -0.62983173840448 0.00257206959645568 -0.618198 0.0016575 -0.529778418036664 0.0123118775479914 -0.493647 0.000296959 REST-independent SLIT2 9353 ENSG00000145147 O94813
SLITRK5 -0.539669750650431 0.00287031781984738 -0.527835 0.00943399 -0.417122811605473 0.0256374467309366 -0.384575 0.00146148 REST-independent SLITRK5 26050 ENSG00000165300 O94991
SMARCA1 -0.826058371261122 5.22897212121489e-09 -0.747374 0.000909465 -0.660751300556769 4.30650546326276e-06 -0.661123 0.000296959 REST-independent SMARCA1 6594 ENSG00000102038 P28370
SMARCC2 -0.75153302795066 2.02095453658921e-07 -0.723259 0.000909465 -0.558113290945141 0.000181501175668814 -0.429305 0.00124625 REST-independent SMARCC2 6601 ENSG00000139613 Q8TAQ2
SMC4 -0.523833101933329 0.00454933365075243 -0.519818 0.00865253 -0.391410229736202 0.0435968940113207 -0.395647 0.00286777 REST-independent SMC4 10051 ENSG00000113810 Q9NTJ3
SMG8 -0.438184491241132 0.00179600490001794 -0.443943 0.0416346 -0.468646123044808 0.000562423697961492 -0.465645 0.000296959 REST-independent SMG8 55181 ENSG00000167447 Q8ND04
SMOC1 -0.801399888366187 4.26815560160651e-09 -0.774176 0.000909465 -0.694531098881896 3.50066263793767e-07 -0.702443 0.000296959 REST-independent SMOC1 64093 ENSG00000198732 Q9H4F8
SNAI2 -0.769169297047488 5.80904762216296e-08 -0.711939 0.000909465 -0.529831342758392 0.000280903841415987 -0.472045 0.000296959 REST-independent SNAI2 6591 ENSG00000019549 O43623
SNX6 -0.396256576948109 0.00276987943579922 -0.427556 0.0369801 -0.431607424029003 0.000707880467443047 -0.441993 0.000296959 REST-independent SNX6 58533 ENSG00000129515 Q9UNH7
SNX7 -0.541987679502131 0.000147230673286294 -0.51942 0.0109013 -0.567884681716012 4.76850104968816e-05 -0.5694 0.000296959 REST-independent SNX7 51375 ENSG00000162627 Q9UNH6
SOSTDC1 -1.26422786976404 0.0145193733609229 -1.00184 0.0174474 -1.09575988973852 0.0297359652850331 -1.11121 0.00660227 REST-independent SOSTDC1 25928 ENSG00000171243 Q6X4U4
SP9 -0.896292810492556 3.69241556836951e-06 -1.02794 0.000909465 -0.758858812874858 8.75965236003647e-05 -0.731156 0.000296959 REST-independent SP9 100131390 ENSG00000217236 P0CG40
SPATA5 -0.557704291793263 0.00407689252799539 -0.584871 0.0131102 -0.489082855114215 0.0116748314365284 -0.523429 0.000296959 REST-independent SPATA5 166378 ENSG00000145375 Q8NB90
SPATA5L1 -0.613255494411345 0.000214702732899619 -0.640829 0.00403448 -0.678221656558117 2.66363932975679e-05 -0.633228 0.000296959 REST-independent SPATA5L1 79029 ENSG00000171763 Q9BVQ7
SPOCK3 -1.18507474222828 0.000659848829528513 -0.988532 0.00943399 -1.19918594142122 0.000444049940943395 -0.994911 0.000296959 REST-independent SPOCK3 50859 ENSG00000196104 Q9BQ16
SPTLC2 -0.578242228580388 0.000398917188277411 -0.568484 0.00454554 -0.411799268283016 0.0164739115349114 -0.410899 0.0007968 REST-independent SPTLC2 9517 ENSG00000100596 O15270
SSBP3 -0.544269496100455 7.64054335490028e-05 -0.541638 0.00865253 -0.563285838428333 2.87664605603249e-05 -0.508073 0.000296959 REST-independent SSBP3 23648 ENSG00000157216 Q9BWW4
SSU72 -0.399657284483455 0.0336276439270192 -0.426728 0.0367597 -0.383809193015435 0.0373610067006673 -0.39631 0.00207861 REST-independent SSU72 29101 ENSG00000160075 Q9NP77
ST6GAL1 -0.622732318619494 0.000464860392557846 -0.776031 0.000909465 -0.380857572572432 0.0451345872119116 -0.529809 0.0007968 REST-independent ST6GAL1 6480 ENSG00000073849 P15907
STAT1 -0.538186778006361 0.000683447460050428 -0.551082 0.00554039 -0.569787399131433 0.00021987567791583 -0.553573 0.000296959 REST-independent STAT1 6772 ENSG00000115415 P42224
STAT2 -0.473263624064291 0.021762344131399 -0.501574 0.0297133 -0.5715387423274 0.00322006676762282 -0.553807 0.000296959 REST-independent STAT2 6773 ENSG00000170581 P52630
STAU2 -0.576884865027778 0.00323516127554677 -0.5736 0.0116316 -0.483171021679172 0.0149229807075043 -0.501455 0.000296959 REST-independent STAU2 27067 ENSG00000040341 Q9NUL3
STK10 -0.471015862284467 0.0019425885707768 -0.533315 0.0116316 -0.416829919682248 0.0061042664821405 -0.451984 0.000296959 REST-independent STK10 6793 ENSG00000072786 O94804
STK38 -0.818308868852328 1.24516293633082e-09 -0.631586 0.00296644 -0.512298174651086 0.000262017226309084 -0.510874 0.000296959 REST-independent STK38 11329 ENSG00000112079 Q15208
STON1 -1.30042373247279 2.66936471500311e-08 -1.02909 0.000909465 -1.34857203698286 5.74672744850685e-09 -1.18414 0.000296959 REST-independent STON1 11037 ENSG00000243244 Q9Y6Q2
STRBP -0.569794227757395 5.92623404337924e-05 -0.566437 0.00403448 -0.525133996911435 0.000209585458381891 -0.544145 0.000296959 REST-independent STRBP 55342 ENSG00000165209 Q96SI9
STX8 -0.698337226679694 0.00386404911586852 -0.699406 0.00233451 -1.04823553015741 3.70937445180672e-06 -0.888513 0.000296959 REST-independent STX8 9482 ENSG00000170310 Q9UNK0
STXBP2 -0.530395203098933 0.00588868525242506 -0.533711 0.0116316 -0.649742268268656 0.00035619582862763 -0.600308 0.000296959 REST-independent STXBP2 6813 ENSG00000076944 Q15833
STYXL1 -1.02649002966145 0.000258466847976739 -1.10093 0.000909465 -0.93407497188877 0.000820391525114079 -1.02102 0.000296959 REST-independent STYXL1 51657 ENSG00000127952 Q9Y6J8
SUCLA2 -0.530023994514258 4.94395587261927e-05 -0.514131 0.0140774 -0.397463651612451 0.00321656596311526 -0.438156 0.000558687 REST-independent SUCLA2 8803 ENSG00000136143 Q9P2R7
SUGT1 -0.7956135716061 1.82720014384182e-09 -0.761416 0.000909465 -0.927053490123571 7.95403034729803e-13 -0.930368 0.000296959 REST-independent SUGT1 10910 ENSG00000165416 Q9Y2Z0
SULF2 -0.490202600607464 0.000570028574362545 -0.494179 0.0177816 -0.43343985381767 0.00239499146737637 -0.413389 0.000296959 REST-independent SULF2 55959 ENSG00000196562 Q8IWU5
SUOX -0.950576867371348 4.72754507549648e-08 -0.941494 0.000909465 -0.869471743831647 4.4868498281101e-07 -0.846638 0.000296959 REST-independent SUOX 6821 ENSG00000139531 P51687
SUPT3H -1.38676527872506 2.31484424305728e-08 -1.70511 0.000909465 -1.39603573267015 1.29467989660979e-08 -1.28325 0.000296959 REST-independent SUPT3H 8464 ENSG00000196284 O75486
SYBU -0.74216323470496 4.02996412573543e-05 -0.683679 0.000909465 -0.645284675909815 0.00035619582862763 -0.579477 0.000296959 REST-independent SYBU 55638 ENSG00000147642 Q9NX95
SYPL2 -1.11290361176088 4.52124127207493e-10 -1.00927 0.000909465 -1.16117628125148 4.9956976085832e-11 -1.22238 0.000296959 REST-independent SYPL2 284612 ENSG00000143028 Q5VXT5
SYTL4 -0.898141338802964 0.00018526803000623 -0.959738 0.000909465 -0.994234034798665 2.49646586582104e-05 -1.02676 0.000296959 REST-independent SYTL4 94121 ENSG00000102362 Q96C24
TAF12 -0.516139939901186 0.00257525087318395 -0.572035 0.00504662 -1.07059168412063 8.04446543888724e-12 -0.991718 0.000296959 REST-independent TAF12 6883 ENSG00000120656 Q16514
TAF15 -0.535942012090921 1.12970943838694e-05 -0.510579 0.00986453 -0.393093950273832 0.00193128324765717 -0.367387 0.00341938 REST-independent TAF15 8148 ENSG00000276833;ENSG00000270647 Q92804
TALDO1 -0.61722636905657 0.000930075162040255 -0.55057 0.00865253 -0.63512018336992 0.00047749752433005 -0.640815 0.000296959 REST-independent TALDO1 6888 ENSG00000177156 P37837
TAMM41 -0.579684942914376 0.00208907706116883 -0.729458 0.000909465 -0.840779871247599 2.16432010131195e-06 -0.786812 0.000296959 REST-independent TAMM41 132001 ENSG00000279643;ENSG00000144559 Q96BW9
TARS2 -0.788204569363285 7.28796481296727e-11 -0.690301 0.000909465 -0.547260150593083 1.11343185695085e-05 -0.538506 0.000296959 REST-independent TARS2 80222 ENSG00000143374 Q9BW92
TBC1D2 -0.922778350510036 0.0139437588455426 -0.861886 0.00353789 -0.911573772920953 0.0125446967049126 -0.918016 0.000296959 REST-independent TBC1D2 55357 ENSG00000095383 Q9BYX2
TBC1D7 -0.572002737094731 0.00969686214805874 -0.589379 0.006 -0.802675942573248 8.85922049481883e-05 -0.779079 0.000296959 REST-independent TBC1D7 51256 ENSG00000145979 Q9P0N9
TBCD -0.891121252749114 9.71940397871099e-15 -0.821973 0.000909465 -0.614154069108878 1.86095609072689e-07 -0.567829 0.000296959 REST-independent TBCD 6904 ENSG00000141556;ENSG00000278759 Q9BTW9
TCF7 -0.778515279527178 9.85609087765083e-08 -0.719099 0.000909465 -0.600325204392764 4.76850104968816e-05 -0.562527 0.000296959 REST-independent TCF7 6932 ENSG00000081059 P36402
TCTN3 -0.436096553217378 0.00540515591392752 -0.454389 0.0337352 -0.430800820674685 0.00502166023453276 -0.437832 0.000558687 REST-independent TCTN3 26123 ENSG00000119977 Q6NUS6
TECPR1 -0.439610226053796 0.0258025579532409 -0.496895 0.031973 -0.453999391378031 0.0170634753583942 -0.348706 0.014925 REST-independent TECPR1 25851 ENSG00000205356 Q7Z6L1
TEP1 -0.684524930934113 0.00287147635406056 -0.601336 0.00693636 -0.587992097462425 0.0106120908318209 -0.633402 0.000296959 REST-independent TEP1 7011 ENSG00000129566 Q99973
TEX15 -1.05953188824747 0.000279809848838998 -0.969852 0.000909465 -0.690514886784956 0.026056874298553 -0.608807 0.000296959 REST-independent TEX15 56154 ENSG00000133863
THADA -1.03143430841301 2.20796273431911e-11 -0.926393 0.000909465 -0.936679475198485 1.00005084339401e-09 -0.882467 0.000296959 REST-independent THADA 63892 ENSG00000115970 Q6YHU6
THAP1 -0.664640238995871 0.00151782653544864 -0.522377 0.0285901 -0.541668531753805 0.0103006748892465 -0.505222 0.000296959 REST-independent THAP1 55145 ENSG00000131931 Q9NVV9
THAP10 -1.19735881586426 7.26023639532749e-08 -1.11457 0.000909465 -1.07685821620489 8.2255880571346e-07 -1.24486 0.000296959 REST-independent THAP10 56906 ENSG00000129028 Q9P2Z0
THOC1 -0.662086802806212 8.02591948997692e-07 -0.589379 0.00454554 -0.781656379381277 2.183644680058e-09 -0.77315 0.000296959 REST-independent THOC1 9984 ENSG00000079134 Q96FV9
TJP2 -0.557051838517589 0.000106904853929264 -0.510337 0.0109013 -0.412494499353119 0.00568640800264951 -0.38083 0.000558687 REST-independent TJP2 9414 ENSG00000119139 Q9UDY2
TLE1 -0.512255125538617 0.000132718950241842 -0.492964 0.0140774 -0.389559839020373 0.0049591362712604 -0.389087 0.00167134 REST-independent TLE1 7088 ENSG00000196781 Q04724
TLE3 -0.574000979252687 3.92902901451583e-06 -0.54998 0.00403448 -0.411710853779841 0.00151749284743793 -0.429258 0.00102747 REST-independent TLE3 7090 ENSG00000140332 Q04726
TLE4 -0.771461688550333 5.90802706308373e-07 -0.722844 0.000909465 -0.600267786751466 0.000153083508373991 -0.557075 0.000296959 REST-independent TLE4 7091 ENSG00000106829 Q04727
TLN2 -0.756868307004013 0.00107393647949266 -0.764786 0.000909465 -0.67564770799462 0.00349430883248056 -0.593444 0.000296959 REST-independent TLN2 83660 ENSG00000171914 Q9Y4G6
TM2D3 -0.520852607100249 0.0017137603282374 -0.494966 0.0204927 -0.647559537951624 3.77845107789362e-05 -0.608889 0.000296959 REST-independent TM2D3 80213 ENSG00000184277 Q9BRN9
TM7SF3 -0.671715576787605 2.25310858341647e-06 -0.683681 0.000909465 -0.685513748396294 9.24396733825492e-07 -0.650795 0.000296959 REST-independent TM7SF3 51768 ENSG00000064115 Q9NS93
TMBIM4 -0.525586910791732 0.00520581100770656 -0.450634 0.0498294 -0.419000763374362 0.0287624263183351 -0.362697 0.0110322 REST-independent TMBIM4 51643 ENSG00000155957 Q9HC24
TMEFF2 -0.936161343789379 0.00277624955137765 -0.912165 0.000909465 -0.708033902279594 0.0232891635332762 -0.899195 0.000296959 REST-independent TMEFF2 23671 ENSG00000144339 Q9UIK5
TMEM104 -0.851982087035678 4.78071514438654e-09 -0.902976 0.000909465 -0.787991013327003 4.78063861975452e-08 -0.821781 0.000296959 REST-independent TMEM104 54868 ENSG00000109066 Q8NE00
TMEM108 -0.563767540045614 0.0296045575819026 -0.885896 0.000909465 -0.654864693831433 0.00792621662998714 -0.800302 0.000296959 REST-independent TMEM108 66000 ENSG00000144868 Q6UXF1
TMEM126B -0.603245982972095 2.38401195020633e-05 -0.596748 0.00296644 -0.823944360230988 1.3373210932188e-09 -0.780457 0.000296959 REST-independent TMEM126B 55863 ENSG00000171204 Q8IUX1
TMEM184C -0.634309152732237 0.0122941830405013 -0.661209 0.00296644 -0.707677367515251 0.00339142613827575 -0.648337 0.000296959 REST-independent TMEM184C 55751 ENSG00000164168 Q9NVA4
TMTC2 -0.986213590608601 0.000316089278201151 -0.845404 0.000909465 -0.585471599706913 0.0444866569908372 -0.417666 0.00968957 REST-independent TMTC2 160335 ENSG00000179104 Q8N394
TP53BP1 -1.02231739579437 1.43347802898188e-09 -0.950423 0.000909465 -0.742019638536433 1.89215616309822e-05 -0.645765 0.000296959 REST-independent TP53BP1 7158 ENSG00000067369 Q12888
TPM1 -0.638512684903957 0.000151111312582545 -0.564137 0.00824627 -0.55650053473634 0.00102686011029527 -0.575381 0.000296959 REST-independent TPM1 7168 ENSG00000140416 P09493
TPMT -0.385669736775736 0.032286500686033 -0.463919 0.0355298 -0.689248239401634 1.20562229520617e-05 -0.666824 0.000296959 REST-independent TPMT 7172 ENSG00000137364 P51580
TPP1 -0.675981537984595 4.75695596640047e-07 -0.683393 0.000909465 -0.500268970726752 0.000295243830032913 -0.509483 0.000296959 REST-independent TPP1 1200 ENSG00000166340 O14773
TPP2 -0.708622274704685 4.8043592210072e-05 -0.692486 0.0016575 -0.608038504391776 0.000542587333899102 -0.642854 0.000296959 REST-independent TPP2 7174 ENSG00000134900 P29144
TPX2 -0.444780978727396 5.25926531403988e-05 -0.428187 0.0332019 -0.356938719269459 0.00154881202353199 -0.331862 0.00879114 REST-independent TPX2 22974 ENSG00000088325 Q9ULW0
TRA2A -0.666580583302916 1.0892317309349e-08 -0.621735 0.00233451 -0.851545158578398 4.10804218242838e-14 -0.795751 0.000296959 REST-independent TRA2A 29896 ENSG00000164548 Q13595
TRAPPC12 -0.700430638550453 6.44553215180348e-06 -0.659317 0.000909465 -0.453813280392885 0.0053609502618942 -0.549244 0.000296959 REST-independent TRAPPC12 51112 ENSG00000171853;ENSG00000274891 Q8WVT3
TRAPPC2 -0.629870371579265 0.000446140599012859 -0.553873 0.0120196 -0.560729539374984 0.00173842097688988 -0.604043 0.000296959 REST-independent TRAPPC2 6399 ENSG00000196459 P0DI82;P0DI81
TRAPPC9 -1.40148868491888 1.04333618527609e-12 -1.28472 0.000909465 -1.14812966730708 2.95127171671857e-09 -1.13826 0.000296959 REST-independent TRAPPC9 83696 ENSG00000167632 Q96Q05
TRIB1 -0.608573093917626 1.44646965172419e-05 -0.519057 0.0144228 -0.620637862973918 6.67837770958362e-06 -0.614237 0.000296959 REST-independent TRIB1 10221 ENSG00000173334 Q96RU8
TRIM16 -0.484506298858603 0.0452063900455444 -0.500673 0.0409416 -0.541094264206593 0.0183653546592489 -0.447806 0.00378348 REST-independent TRIM16 10626 ENSG00000221926 O95361
TRMT1 -0.643304143794336 1.01500350203896e-05 -0.708327 0.000909465 -0.681711712035167 1.61755034578248e-06 -0.72571 0.000296959 REST-independent TRMT1 55621 ENSG00000104907 Q9NXH9
TRMT1L -0.675501766144442 0.000202298451799238 -0.567178 0.0102315 -0.526949372440358 0.00478535878612148 -0.46761 0.000296959 REST-independent TRMT1L 81627 ENSG00000121486 Q7Z2T5
TRMT61B -0.629413521323774 0.00174797306996053 -0.653903 0.000909465 -0.704784788039491 0.000277614247790177 -0.720845 0.000296959 REST-independent TRMT61B 55006 ENSG00000171103 Q9BVS5
TRNT1 -0.739305427748601 0.000461935060792466 -0.645174 0.00504662 -0.824530333906605 6.03438910315477e-05 -0.723917 0.000296959 REST-independent TRNT1 51095 ENSG00000072756 Q96Q11
TRUB2 -0.521726864475656 0.000305439492300381 -0.504398 0.0134079 -0.633082641469103 4.55112387373821e-06 -0.588313 0.000296959 REST-independent TRUB2 26995 ENSG00000167112 O95900
TSHZ1 -0.735895212907138 3.82725643911235e-06 -0.725687 0.000909465 -0.407958551430042 0.0186022016576657 -0.451198 0.000296959 REST-independent TSHZ1 10194 ENSG00000179981 Q6ZSZ6
TSPAN7 -0.569638427676205 0.000210967303020137 -0.562736 0.0078661 -0.620254569612283 3.43298061226391e-05 -0.584687 0.000296959 REST-independent TSPAN7 7102 ENSG00000156298 P41732
TTC14 -0.631950570165328 0.0074739060591719 -0.571284 0.00865253 -0.645905508902689 0.0049327787674343 -0.661482 0.000296959 REST-independent TTC14 151613 ENSG00000163728 Q96N46
TTC27 -0.50551139451747 0.000168863253933316 -0.500759 0.0180551 -0.40273353915426 0.00332210418063247 -0.392811 0.00102747 REST-independent TTC27 55622 ENSG00000018699 Q6P3X3
TTC35 -0.437575829588506 0.00681464477547213 -0.491944 0.0223219 -0.626013785434204 2.90253999446952e-05 -0.648978 0.000296959 REST-independent EMC2 9694 ENSG00000104412 Q15006
TTC5 -0.553960909502453 0.00127430775792737 -0.497911 0.0225537 -0.737006916542729 5.9199384147185e-06 -0.561591 0.000296959 REST-independent TTC5 91875 ENSG00000136319 Q8N0Z6
TTI1 -0.633717740338445 6.40349717157999e-05 -0.634703 0.0016575 -0.605510291068025 0.000116842760404522 -0.605343 0.000296959 REST-independent TTI1 9675 ENSG00000101407 O43156
TUFM -0.514711061567404 0.000906076926767634 -0.519207 0.00693636 -0.495660999803851 0.00122660000811459 -0.498839 0.000296959 REST-independent TUFM 7284 ENSG00000178952 P49411
TUSC3 -0.451936361800244 0.00138868941436819 -0.462805 0.0297133 -0.410122284359105 0.00363520281049079 -0.470187 0.000558687 REST-independent TUSC3 7991 ENSG00000104723 Q13454
UBE3B -0.701555125117701 1.25902945093509e-05 -0.709035 0.000909465 -0.493940970854165 0.00300105609006229 -0.519712 0.000296959 REST-independent UBE3B 89910 ENSG00000151148 Q7Z3V4
UBE3D -0.817609250010138 0.000259416400679327 -0.940793 0.000909465 -0.539712422384432 0.0211032822382162 -0.665374 0.000296959 REST-independent UBE3D 90025 ENSG00000118420 Q7Z6J8
UBE4B -0.750340497317509 1.39684772491629e-06 -0.671886 0.000909465 -0.427258596701477 0.0114022159919639 -0.411899 0.000296959 REST-independent UBE4B 10277 ENSG00000130939 O95155
UBL7 -0.47531578169363 0.00525936264982109 -0.499053 0.0127682 -0.640950803097697 4.87039187770107e-05 -0.666057 0.000296959 REST-independent UBL7 84993 ENSG00000288408;ENSG00000138629 Q96S82
UBP1 -0.574775176226006 0.00012111493919877 -0.541683 0.006 -0.357549647482943 0.0275159577085277 -0.341592 0.00849197 REST-independent UBP1 7342 ENSG00000153560 Q9NZI7
UBXN8 -0.809309270834695 1.40293972490394e-05 -0.775789 0.000909465 -0.942643321276205 2.25830533208618e-07 -0.828243 0.000296959 REST-independent UBXN8 7993 ENSG00000104691 O00124
UGT3A2 -0.854121859410131 0.00635453826860609 -0.83337 0.0016575 -0.894658739689239 0.00332099170120048 -0.848688 0.000296959 REST-independent UGT3A2 167127 ENSG00000168671 Q3SY77
UHRF2 -0.65811161031748 0.000489703240718885 -0.660422 0.0016575 -0.435843619495661 0.0295760355709677 -0.421812 0.00102747 REST-independent UHRF2 115426 ENSG00000147854 Q96PU4
ULBP3 -0.793316203550197 0.00230039101209964 -0.66141 0.0112456 -0.62926191719392 0.0157140465408354 -0.498385 0.0127499 REST-independent ULBP3 79465 ENSG00000131019 Q9BZM4
UNC13B -1.04814292830194 7.58747636246734e-13 -0.998688 0.000909465 -0.854297904553828 5.77761883633089e-09 -0.808065 0.000296959 REST-independent UNC13B 10497 ENSG00000198722 O14795
UNC5B -0.455998420289438 0.00509587576604471 -0.568665 0.0016575 -0.437575007108795 0.00634814673842657 -0.469006 0.000296959 REST-independent UNC5B 219699 ENSG00000107731 Q8IZJ1
UNC5C -1.23817506725422 1.1151160600864e-09 -1.31511 0.000909465 -0.903364642556622 1.0359885928678e-05 -0.849568 0.000296959 REST-independent UNC5C 8633 ENSG00000182168 O95185
USO1 -0.46094206575475 0.00251205179118955 -0.464265 0.0228487 -0.347254425566718 0.0291302146242972 -0.358972 0.00430902 REST-independent USO1 8615 ENSG00000138768 O60763
USP21 -0.43026449919475 0.00363330954824517 -0.446245 0.0430966 -0.401576015193692 0.0061320974024354 -0.368782 0.00323482 REST-independent USP21 27005 ENSG00000143258 Q9UK80
USP28 -0.57472562311148 0.00124385762007623 -0.572929 0.00454554 -0.478725435813614 0.00803593325567849 -0.477908 0.000296959 REST-independent USP28 57646 ENSG00000048028 Q96RU2
USP33 -0.491765750149269 0.0108694612788077 -0.492127 0.0208063 -0.415696020233177 0.0338672864686192 -0.395204 0.00360294 REST-independent USP33 23032 ENSG00000077254 Q8TEY7
USP48 -0.557571886773346 7.35605795315322e-05 -0.505008 0.0167576 -0.585824698291583 1.97026440657461e-05 -0.517037 0.000296959 REST-independent USP48 84196 ENSG00000090686 Q86UV5
USP5 -0.441249310053272 0.000844284388679549 -0.425286 0.0398121 -0.458901858398875 0.000363686334253173 -0.485653 0.000296959 REST-independent USP5 8078 ENSG00000111667 P45974
UTP14A -0.397566962543119 0.00296869395503376 -0.494959 0.015501 -0.580018472602521 2.40694028985952e-06 -0.598697 0.000296959 REST-independent UTP14A 10813 ENSG00000156697 Q9BVJ6
UTP3 -0.696175432280375 1.41101532566543e-06 -0.675602 0.000909465 -0.787992581381355 1.96592428626738e-08 -0.814452 0.000296959 REST-independent UTP3 57050 ENSG00000132467 Q9NQZ2
VARS -0.540692635568749 1.71722249109013e-05 -0.538672 0.00741738 -0.403350939069317 0.00199357093875278 -0.386408 0.00268012 REST-independent VARS1 7407 ENSG00000231945;ENSG00000226589;ENSG00000204394;ENSG00000096171;ENSG00000231116;ENSG00000224264;ENSG00000227686 P26640
VASP -0.476762537268654 0.00498043575838133 -0.468422 0.0311667 -0.502764793629614 0.00223509388536964 -0.482312 0.000296959 REST-independent VASP 7408 ENSG00000125753 P50552
VIM -0.481429417551632 0.000212263633210411 -0.459576 0.0277773 -0.348676930343725 0.0105222059039945 -0.326065 0.0126076 REST-independent VIM 7431 ENSG00000026025 P08670
VPS41 -0.50397793648083 0.00212317084887216 -0.457882 0.0329592 -0.344239327392709 0.0491238347840503 -0.277407 0.0232721 REST-independent VPS41 27072 ENSG00000006715 P49754
VPS52 -0.946103321509356 1.42119480173979e-11 -0.886409 0.000909465 -0.74698770998284 1.13312711357591e-07 -0.690488 0.000296959 REST-independent VPS52 6293 ENSG00000225590;ENSG00000228425;ENSG00000206286;ENSG00000223618;ENSG00000224455;ENSG00000236014;ENSG00000223501 Q8N1B4
VPS8 -0.640997508250932 0.00105014383258628 -0.71649 0.000909465 -0.441281282791771 0.0320925732735755 -0.471448 0.000296959 REST-independent VPS8 23355 ENSG00000156931 Q8N3P4
VSNL1 -1.71136656054971 2.92730271284122e-05 -1.36618 0.000909465 -1.55836278660198 9.2511036702266e-05 -1.17971 0.000296959 REST-independent VSNL1 7447 ENSG00000163032 P62760
WDR12 -0.566530349731764 1.14945140937442e-05 -0.495446 0.0140774 -0.50735069667026 8.75965236003647e-05 -0.466214 0.000296959 REST-independent WDR12 55759 ENSG00000138442 Q9GZL7
WDR3 -0.563912793235203 3.55555464171139e-05 -0.509291 0.0112456 -0.312114438875024 0.0401602555109898 -0.323267 0.0134158 REST-independent WDR3 10885 ENSG00000065183 Q9UNX4
WDR4 -0.892419149333854 3.61560903228114e-12 -0.757749 0.000909465 -0.991303591736295 4.22451639634097e-15 -0.934664 0.000296959 REST-independent WDR4 10785 ENSG00000160193 P57081
WDR44 -0.645493375123327 0.00025645016904743 -0.653321 0.000909465 -0.507548930595211 0.00514271362759471 -0.508569 0.000296959 REST-independent WDR44 54521 ENSG00000131725 Q5JSH3
WDR46 -0.644670230849125 2.14342310567857e-05 -0.59083 0.00233451 -0.626356528154316 2.89563008826221e-05 -0.617923 0.000296959 REST-independent WDR46 9277 ENSG00000206284;ENSG00000204221;ENSG00000236222;ENSG00000226916;ENSG00000227057 O15213
WDR77 -0.637906384645262 2.24750955734546e-07 -0.655774 0.0355298 -0.665220027015249 3.58323056199656e-08 -0.672819 0.000296959 REST-independent WDR77 79084 ENSG00000116455 Q9BQA1
WDR91 -0.952137674169303 1.45907267930443e-11 -0.745562 0.000909465 -0.819604184841736 4.92266053132649e-09 -0.751909 0.000296959 REST-independent WDR91 29062 ENSG00000105875 A4D1P6
WDR92 -0.562062432071727 0.00114588148247502 -0.468387 0.0433272 -0.531712423642609 0.00187733178567811 -0.562666 0.000296959 REST-independent DNAAF10 116143 ENSG00000243667 Q96MX6
WDSUB1 -0.774282354335436 5.36352906601974e-05 -0.596422 0.00986453 -0.642644717090291 0.000780226804152102 -0.559388 0.000296959 REST-independent WDSUB1 151525 ENSG00000196151 Q8N9V3
WNT10B -0.688920616714022 0.00242767992113483 -0.533346 0.0240882 -0.55348923964084 0.0158904500173308 -0.482396 0.00146148 REST-independent WNT10B 7480 ENSG00000169884 O00744
WSCD1 -0.71155168337702 9.27315648452432e-07 -0.600343 0.00233451 -0.783121062077776 3.25111703284112e-08 -0.732447 0.000296959 REST-independent WSCD1 23302 ENSG00000179314 Q658N2
XPO1 -0.437486225336008 0.00531774661506838 -0.418991 0.0418306 -0.390747915140685 0.0128067710387282 -0.393092 0.0018777 REST-independent XPO1 7514 ENSG00000082898 O14980
XPO5 -0.536078413693965 5.40061875715661e-05 -0.481812 0.0160124 -0.321031038866795 0.0270697635870149 -0.312952 0.0164128 REST-independent XPO5 57510 ENSG00000124571 Q9HAV4
XRCC1 -1.01129999051116 4.94382395680194e-13 -1.07311 0.000909465 -1.02648564267619 1.17003654704467e-13 -1.12669 0.000296959 REST-independent XRCC1 7515 ENSG00000073050 P18887
YARS2 -0.572202173648895 0.000561051173052984 -0.537322 0.00824627 -0.605172531411506 0.000179600526952924 -0.592858 0.000296959 REST-independent YARS2 51067 ENSG00000139131 Q9Y2Z4
YIPF4 -0.828211030482465 1.43650501410433e-06 -0.804794 0.000909465 -0.660265017868263 0.000154909397779759 -0.71033 0.000296959 REST-independent YIPF4 84272 ENSG00000119820 Q9BSR8
ZC3H18 -0.754295834577773 5.92607453686419e-10 -0.733773 0.000909465 -0.73220012177057 1.3373210932188e-09 -0.762899 0.000296959 REST-independent ZC3H18 124245 ENSG00000158545 Q86VM9
ZC3H3 -0.703026370374425 1.56822761287114e-07 -0.56648 0.00824627 -0.682832374789158 2.63684629040497e-07 -0.587217 0.000296959 REST-independent ZC3H3 23144 ENSG00000014164;ENSG00000282684 Q8IXZ2
ZCCHC12 -1.04810074026033 3.48216150132025e-14 -1.0154 0.000909465 -1.54887198095989 1.28392902719189e-29 -1.48123 0.000296959 REST-independent ZCCHC12 170261 ENSG00000174460 Q6PEW1
ZCCHC6 -0.820163782486061 0.000854661739422541 -0.781562 0.000909465 -0.616101106918485 0.0153386699351791 -0.666806 0.000296959 REST-independent TUT7 79670 ENSG00000083223 Q5VYS8
ZDHHC14 -0.739451318345439 9.2413629733133e-05 -0.679247 0.0016575 -0.709001146578224 0.000150229253916724 -0.604758 0.000296959 REST-independent ZDHHC14 79683 ENSG00000175048 Q8IZN3
ZDHHC2 -0.760448512832376 7.82550430820805e-06 -0.767163 0.000909465 -0.61489696997436 0.00034715602827506 -0.681918 0.000296959 REST-independent ZDHHC2 51201 ENSG00000104219 Q9UIJ5
ZEB1-AS1 -0.953736632686243 0.00204383389007387 -0.971094 0.000909465 -0.914123815812788 0.00259659447694441 -0.75356 0.0007968 REST-independent ZEB1-AS1 220930 ENSG00000237036
ZHX1 -0.706689308294767 0.000914667804132591 -0.700069 0.0357746 -0.479328181911277 0.0348484900945948 -0.476917 0.0113211 REST-independent ZHX1 11244 ENSG00000165156 Q9UKY1
ZIC2 -0.817433104600399 7.66149315484558e-11 -0.808037 0.000909465 -0.869858524392887 1.65844721396091e-12 -0.87774 0.000296959 REST-independent ZIC2 7546 ENSG00000043355 O95409
ZIC3 -0.784809404042009 1.18132705202881e-07 -0.692537 0.000909465 -0.749815163948951 3.19961260440668e-07 -0.659608 0.000296959 REST-independent ZIC3 7547 ENSG00000156925 O60481
ZNF205 -0.646314719802338 0.0022694269472311 -0.533092 0.0208063 -0.666707952100639 0.00124722717102567 -0.52114 0.000296959 REST-independent ZNF205 7755 ENSG00000122386 O95201
ZNF259 -0.608838367693037 3.99667099030351e-06 -0.555122 0.00454554 -0.541303488087049 4.27711119016636e-05 -0.471617 0.000296959 REST-independent ZPR1 8882 ENSG00000109917 O75312
ZNF385D -1.38806043541023 0.0180198029682977 -1.34526 0.0327321 -1.8470342365911 0.00159768483861 -1.80803 0.00998365 REST-independent ZNF385D 79750 ENSG00000151789 Q9H6B1
ZNF503 -1.44095540792481 5.47041891881718e-38 -1.45722 0.000909465 -1.48877456082119 8.35077984413398e-41 -1.47278 0.000296959 REST-independent ZNF503 84858 ENSG00000165655 Q96F45
ZNF503-AS2 -1.56030757526298 2.95123660564607e-30 -1.50298 0.00403448 -1.53123733577196 1.34147671725343e-29 -1.47761 0.000296959 REST-independent ZNF503-AS2 100131213 ENSG00000237149
ZNF620 -0.70068288218851 0.00472175777627066 -0.612997 0.006 -0.669881744136013 0.00616620506693829 -0.599645 0.000558687 REST-independent ZNF620 253639 ENSG00000177842 Q6ZNG0
ZNF703 -0.638996111825541 2.06848690120694e-07 -0.612633 0.000909465 -0.577356434731601 2.72699449178407e-06 -0.566513 0.000296959 REST-independent ZNF703 80139 ENSG00000183779 Q9H7S9
ZNF75D -0.85136126541844 4.80723582761015e-06 -0.732168 0.0016575 -0.527734938782852 0.00621481143936987 -0.509295 0.0007968 REST-independent ZNF75D 7626 ENSG00000186376 P51815
ZNHIT6 -0.476382412102021 0.00134536434432362 -0.439082 0.0348058 -0.667781522306753 1.31528740401518e-06 -0.621433 0.000296959 REST-independent ZNHIT6 54680 ENSG00000117174 Q9NWK9
ZNRD1 -0.834574577885278 0.000168630130788753 -0.749099 0.000909465 -1.05610401450471 7.2794402472168e-07 -1.02874 0.000296959 REST-independent POLR1H 30834 ENSG00000235443;ENSG00000235176;ENSG00000206502;ENSG00000236949;ENSG00000236808;ENSG00000224859;ENSG00000066379;ENSG00000233795 Q9P1U0
ZP3 -1.21173591300202 0.00803463123909465 -1.09976 0.0488779 -1.80589892342162 9.34511467653095e-05 -1.21745 0.00893674 REST-independent ZP3 7784 ENSG00000188372 P21754
RAB3C -2.05821735265495 2.46621388744384e-14 -1.66565 0.000909465 n.s. >0.05 -0.472624 0.0165523 REST-dependent RAB3C 115827 ENSG00000152932 Q96E17
DLX5 -1.4019009282031 2.37038273722953e-07 -0.979333 0.000909465 n.s. >0.05 -0.555119 0.00628211 REST-dependent DLX5 1749 ENSG00000105880 P56178
FMO4 -1.24360168338755 0.00141040284019805 -0.914282 0.0223219 -1.08777653147654 0.0299807391783927 n.s. >0.05 REST-dependent FMO4 2329 ENSG00000076258 P31512
SCLY -1.22677575222323 0.00127882993380511 -1.18258 0.0350901 n.s. >0.05 -1.15361 0.000296959 REST-dependent SCLY 51540 ENSG00000132330 Q96I15
MYCBP -1.15877034703856 0.00593592043650033 -0.536825 0.00909685 n.s. >0.05 -0.5191 0.000296959 REST-dependent MYCBP 26292 ENSG00000214114 Q99417
SOX5 -1.14953785635985 0.000297411940637929 -0.963645 0.0016575 n.s. >0.05 -0.794175 0.0018777 REST-dependent SOX5 6660 ENSG00000134532 P35711
DUSP18 -1.10761041182492 0.000105971273988437 -1.05238 0.000909465 n.s. >0.05 -0.695586 0.000558687 REST-dependent DUSP18 150290 ENSG00000167065 Q8NEJ0
LOC100506433 -1.00973685486735 0.00272702937082278 -0.668923 0.0486881 n.s. >0.05 n.s. >0.05 REST-dependent
CYP1B1 -1.00465342392585 1.20871247185722e-08 -0.832794 0.000909465 n.s. >0.05 -0.305148 0.0470306 REST-dependent CYP1B1 1545 ENSG00000138061 Q16678
TRADD -1.00224044220741 7.81414725960527e-06 -0.755943 0.00233451 n.s. >0.05 -0.486125 0.0107264 REST-dependent TRADD 8717 ENSG00000102871 Q15628
GALNT14 -1.00150810318946 1.94172084591789e-05 -0.56511 0.0246539 n.s. >0.05 -0.412194 0.0253637 REST-dependent GALNT14 79623 ENSG00000158089 Q96FL9
LBX1 -0.996743156623325 0.000354347865856121 -0.741273 0.00693636 n.s. >0.05 n.s. >0.05 REST-dependent LBX1 10660 ENSG00000138136 P52954
BCHE -0.994596182929123 0.000318295915097751 -0.876884 0.00296644 -0.726377826636408 0.0405911689834203 n.s. >0.05 REST-dependent BCHE 590 ENSG00000114200 P06276
PTPRG -0.990665023693674 0.000190294047115963 -0.99207 0.000909465 n.s. >0.05 -0.585906 0.000296959 REST-dependent PTPRG 5793 ENSG00000144724 P23470
OSBPL10 -0.981872497631466 1.66862155676003e-05 -0.928576 0.000909465 n.s. >0.05 -0.554648 0.00286777 REST-dependent OSBPL10 114884 ENSG00000144645 Q9BXB5
RFX3 -0.975857027115385 0.00529169043749573 -1.10044 0.00403448 n.s. >0.05 -0.487169 >0.05 REST-dependent RFX3 5991 ENSG00000080298 P48380
NES -0.93423170195555 1.35590957629885e-05 -0.920287 0.000909465 n.s. >0.05 n.s. >0.05 REST-dependent NES 10763 ENSG00000132688 P48681
MDGA2 -0.933086631921455 0.000224834721325523 -0.556062 0.0355298 n.s. >0.05 n.s. >0.05 REST-dependent MDGA2 161357 ENSG00000139915 Q7Z553
ITGA8 -0.930187282776661 0.00285152225640159 -1.02156 0.000909465 n.s. >0.05 -0.422474 0.0352506 REST-dependent ITGA8 8516 ENSG00000077943 P53708
DEPTOR -0.926686496333397 1.27451812271531e-06 -0.804444 0.000909465 n.s. >0.05 -0.522771 0.00167134 REST-dependent DEPTOR 64798 ENSG00000155792 Q8TB45
TBC1D19 -0.923652752946474 0.000449851338268038 -0.925366 0.000909465 n.s. >0.05 -0.864985 0.000296959 REST-dependent TBC1D19 55296 ENSG00000109680 Q8N5T2
IGSF21 -0.914585461863108 0.00032877154440547 -0.666504 0.0134079 -0.280357624684125 0.0406215471550343 n.s. >0.05 REST-dependent IGSF21 84966 ENSG00000117154 Q96ID5
LOC100506334 -0.908638365946905 0.000126308012119472 -0.853909 0.000909465 n.s. >0.05 -0.470191 0.00879114 REST-dependent
LPAR3 -0.895153118137253 2.00584597022315e-07 -0.797173 0.000909465 n.s. >0.05 n.s. >0.05 REST-dependent LPAR3 23566 ENSG00000171517 Q9UBY5
USP44 -0.894055072552569 0.000711849359852011 -1.19691 0.000909465 n.s. >0.05 -0.823808 0.000296959 REST-dependent USP44 84101 ENSG00000136014 Q9H0E7
HS6ST3 -0.861513879026558 0.000503601100608899 -0.784936 0.0016575 n.s. >0.05 -0.453153 0.00707175 REST-dependent HS6ST3 266722 ENSG00000185352 Q8IZP7
PLXDC2 -0.856792239562398 0.000126141955776673 -0.714206 0.00554039 n.s. >0.05 -0.625555 0.00102747 REST-dependent PLXDC2 84898 ENSG00000120594 Q6UX71
TLL1 -0.846262692540385 0.000610678039241395 -0.670219 0.0341929 -0.745310927040061 0.0179772547282169 n.s. >0.05 REST-dependent TLL1 7092 ENSG00000038295 O43897
PAQR8 -0.84308632049074 5.27040159730167e-07 -0.698231 0.0016575 n.s. >0.05 n.s. >0.05 REST-dependent PAQR8 85315 ENSG00000170915 Q8TEZ7
TSLP -0.839002086426989 0.00534321425995423 -0.69039 0.0204927 n.s. >0.05 n.s. >0.05 REST-dependent TSLP 85480 ENSG00000145777 Q969D9
NR6A1 -0.836980086392468 0.00111070999191063 -0.767348 0.00233451 n.s. >0.05 n.s. >0.05 REST-dependent NR6A1 2649 ENSG00000148200 Q15406
TNIK -0.835250088544061 1.95300326646365e-05 -0.687193 0.0163917 n.s. >0.05 n.s. >0.05 REST-dependent TNIK 23043 ENSG00000154310 Q9UKE5
CHSY3 -0.833221940165533 0.000433086423889621 -0.710813 0.00353789 n.s. >0.05 -0.383258 0.0408986 REST-dependent CHSY3 337876 ENSG00000198108 Q70JA7
LAMA4 -0.827522586978686 7.93308797796003e-07 -1.23742 0.00865253 n.s. >0.05 -0.857896 0.00660227 REST-dependent LAMA4 3910 ENSG00000112769 Q16363
MLYCD -0.825451302187331 9.30508330973696e-06 -0.568749 0.0240882 n.s. >0.05 n.s. >0.05 REST-dependent MLYCD 23417 ENSG00000103150 O95822
TTLL1 -0.817981199808373 0.000542051746618629 -0.552709 0.0411408 n.s. >0.05 -0.474051 0.0201907 REST-dependent TTLL1 25809 ENSG00000100271 O95922
TMEM216 -0.813905738497435 0.00175177452129464 -0.631875 0.0123925 n.s. >0.05 -0.367773 0.0469469 REST-dependent TMEM216 51259 ENSG00000187049 Q9P0N5
C10orf114 -0.799718687523043 0.00174539634344658 -0.77141 0.000909465 n.s. >0.05 n.s. >0.05 REST-dependent MIR1915HG 399726 ENSG00000204682
DPYD -0.778817182084331 0.000252151882247378 -0.725721 0.0302821 n.s. >0.05 n.s. >0.05 REST-dependent DPYD 1806 ENSG00000188641 Q12882
SYNJ1 -0.771267641922882 0.000324451241024243 -0.83388 0.000909465 n.s. >0.05 -0.479555 0.000296959 REST-dependent SYNJ1 8867 ENSG00000159082 O43426
SLC8A1 -0.770738751735654 0.000259371729956716 -0.884127 0.000909465 n.s. >0.05 -0.355787 0.0282523 REST-dependent SLC8A1 6546 ENSG00000183023 P32418
DISP2 -0.761879128440338 0.000896587838486973 -0.593411 0.0208063 1.19925595653416 1.92861874603506e-09 1.37421 0.000296959 REST-dependent DISP2 85455 ENSG00000140323 A7MBM2
MRM1 -0.749946981496838 0.00127738667944552 -0.785925 0.000909465 n.s. >0.05 -0.608556 0.00207861 REST-dependent MRM1 79922 ENSG00000274853;ENSG00000278619 Q6IN84
MED12 -0.73725468294236 3.39022927057254e-06 -0.728331 0.000909465 n.s. >0.05 -0.330763 0.00497304 REST-dependent MED12 9968 ENSG00000184634 Q93074
COL14A1 -0.732141379529885 0.000242202273118273 -0.705541 0.006 n.s. >0.05 -0.357476 0.0428985 REST-dependent COL14A1 7373 ENSG00000187955 Q05707
PDSS2 -0.73093267083655 2.34839937507444e-06 -0.527017 0.0186819 n.s. >0.05 n.s. >0.05 REST-dependent PDSS2 57107 ENSG00000164494 Q86YH6
SRGAP1 -0.730646608435878 0.00584515865923764 -0.646706 0.00648843 n.s. >0.05 -0.516653 0.00207861 REST-dependent SRGAP1 57522 ENSG00000196935 Q7Z6B7
C17orf104 -0.723074180874397 0.00024133917996588 -0.562389 0.0324863 n.s. >0.05 -0.384127 0.0407895 REST-dependent MEIOC 284071 ENSG00000180336 A2RUB1
LIN7A -0.716575849575101 0.00413477630646562 -0.604885 0.0246539 n.s. >0.05 n.s. >0.05 REST-dependent LIN7A 8825 ENSG00000111052 O14910
FCHO1 -0.713720602792137 0.000116101844349532 -0.587425 0.0157545 n.s. >0.05 -0.327388 0.0475763 REST-dependent FCHO1 23149 ENSG00000130475 O14526
SLC44A5 -0.707904627540604 0.000156791139614362 -0.733754 0.000909465 n.s. >0.05 -0.291731 0.0487611 REST-dependent SLC44A5 204962 ENSG00000137968 Q8NCS7
FITM2 -0.704197998352775 0.00299727951668205 -0.691628 0.0120196 n.s. >0.05 n.s. 0.0516121 REST-dependent FITM2 128486 ENSG00000197296 Q8N6M3
DDN -0.702653665662884 0.000171261753875446 -0.630465 0.0120196 n.s. >0.05 n.s. >0.05 REST-dependent DDN 23109 ENSG00000181418 O94850
MAP1A -0.696255100679306 0.000300589547652692 -0.506238 0.0199429 n.s. >0.05 n.s. >0.05 REST-dependent MAP1A 4130 ENSG00000166963 P78559
ATF7IP -0.691241827148539 0.00648055845360013 -0.656571 0.00233451 n.s. >0.05 n.s. >0.05 REST-dependent ATF7IP 55729 ENSG00000171681 Q6VMQ6
TMEM54 -0.687776926482568 4.02302645472364e-05 -0.609737 0.0078661 n.s. >0.05 n.s. >0.05 REST-dependent TMEM54 113452 ENSG00000121900 Q969K7
JOSD2 -0.682419768815375 0.00508216303116658 -0.577739 0.0223219 n.s. >0.05 n.s. >0.05 REST-dependent JOSD2 126119 ENSG00000161677 Q8TAC2
TCF24 -0.677412602440002 0.000390177117371786 -0.640661 0.00824627 n.s. >0.05 -0.24277 >0.05 REST-dependent TCF24 100129654 ENSG00000261787 Q7RTU0
SEMA3D -0.676917335867522 0.0064296906707125 -0.701161 0.00403448 n.s. >0.05 -0.31517 >0.05 REST-dependent SEMA3D 223117 ENSG00000153993 O95025
ADRBK2 -0.674991616994921 8.27667341146862e-06 -0.557929 0.00741738 n.s. >0.05 -0.359142 0.00464901 REST-dependent GRK3 157 ENSG00000100077 P35626
GPR176 -0.668960498175538 0.000221519252564176 -0.563807 0.0134079 n.s. >0.05 n.s. >0.05 REST-dependent GPR176 11245 ENSG00000166073 Q14439
NEDD4 -0.667185795046089 0.00246730941109501 -0.780551 0.000909465 n.s. >0.05 -0.488154 0.00102747 REST-dependent NEDD4 4734 ENSG00000069869 P46934
KIAA0564 -0.663603697672825 0.000263714342346153 -0.696194 0.00403448 n.s. >0.05 n.s. 0.0729107 REST-dependent VWA8 23078 ENSG00000102763 A3KMH1
COL25A1 -0.66100646486602 0.0020427576122612 -0.653975 0.00454554 n.s. >0.05 -0.397648 0.0136856 REST-dependent COL25A1 84570 ENSG00000188517 Q9BXS0
ANKRD26 -0.659789231124516 0.00154786048596108 -0.716027 0.000909465 n.s. >0.05 -0.418685 0.00207861 REST-dependent ANKRD26 22852 ENSG00000107890 Q9UPS8
SYT1 -0.659254141996189 0.00119369810851968 -0.622599 0.00693636 n.s. >0.05 -0.431114 0.00676592 REST-dependent SYT1 6857 ENSG00000067715 P21579
KIAA0513 -0.654128407033988 0.00187920743086635 -0.751298 0.000909465 n.s. >0.05 -0.487883 0.0007968 REST-dependent KIAA0513 9764 ENSG00000135709 O60268
TUBGCP4 -0.651881518114391 8.60782713223645e-05 -0.58628 0.00403448 n.s. >0.05 -0.330825 0.00785259 REST-dependent TUBGCP4 27229 ENSG00000137822 Q9UGJ1
ARFGEF1 -0.651260420931304 0.00111552649906086 -0.569463 0.00865253 n.s. >0.05 -0.314748 0.00909589 REST-dependent ARFGEF1 10565 ENSG00000066777 Q9Y6D6
CBX7 -0.642857612905491 0.00178904570971704 -0.552445 0.0297133 n.s. >0.05 -0.358519 0.0381128 REST-dependent CBX7 23492 ENSG00000100307 O95931
TRIM44 -0.641318242975843 0.00116395570788615 -0.575555 0.00693636 n.s. >0.05 -0.303892 0.0136856 REST-dependent TRIM44 54765 ENSG00000166326 Q96DX7
SOX2 -0.640508822214817 0.000585295195952704 -0.620319 0.0112456 n.s. >0.05 -0.546011 0.00146148 REST-dependent SOX2 6657 ENSG00000181449 P48431
SORBS1 -0.635102713293687 0.0054187486315624 -0.645193 0.00865253 n.s. >0.05 -0.596491 0.000296959 REST-dependent SORBS1 10580 ENSG00000095637 Q9BX66
LRBA -0.633038064991672 0.00310496846948366 -0.556464 0.00741738 n.s. >0.05 n.s. >0.05 REST-dependent LRBA 987 ENSG00000198589 P50851
XYLB -0.632250721147819 0.000304356597775373 -0.539667 0.0157545 n.s. >0.05 n.s. >0.05 REST-dependent XYLB 9942 ENSG00000093217 O75191
FAM188A -0.629590059604712 4.04416418223226e-06 -0.614958 0.00296644 n.s. >0.05 -0.403246 0.00102747 REST-dependent MINDY3 80013 ENSG00000148481 Q9H8M7
ALDH6A1 -0.624323938982533 0.000653680335841457 -0.63715 0.0314201 n.s. >0.05 -0.435528 0.00983964 REST-dependent ALDH6A1 4329 ENSG00000119711 Q02252
DNAJB4 -0.623060479689579 5.21397128805228e-05 -0.485689 0.0413783 n.s. >0.05 -0.389835 0.00595774 REST-dependent DNAJB4 11080 ENSG00000162616 Q9UDY4
MET -0.622056096438712 0.000113480478554337 -0.582607 0.00454554 n.s. >0.05 -0.286222 0.0176144 REST-dependent MET 4233 ENSG00000105976 P08581
TTPAL -0.617513434690418 2.51522929014207e-05 -0.535559 0.0102315 n.s. >0.05 n.s. >0.05 REST-dependent TTPAL 79183 ENSG00000124120 Q9BTX7
LACTB -0.614975809677264 1.53688465154565e-05 -0.502927 0.0367597 n.s. >0.05 n.s. >0.05 REST-dependent LACTB 114294 ENSG00000103642 P83111
PPP1R12B -0.611794118903173 0.00525722500111679 -0.697789 0.0116316 n.s. >0.05 -0.518157 0.0144134 REST-dependent PPP1R12B 4660 ENSG00000077157 O60237
RNFT1 -0.611400205071961 3.89108990373708e-05 -0.632463 0.00233451 n.s. >0.05 -0.37275 0.00722142 REST-dependent RNFT1 51136 ENSG00000189050 Q5M7Z0
DOCK4 -0.609110872723249 0.00295636488855723 -0.642499 0.00353789 n.s. >0.05 n.s. >0.05 REST-dependent DOCK4 9732 ENSG00000128512 Q8N1I0
ZFYVE21 -0.606653727343516 0.000251626647896487 -0.595445 0.00943399 n.s. >0.05 n.s. >0.05 REST-dependent ZFYVE21 79038 ENSG00000100711 Q9BQ24
ERLIN2 -0.606159993678126 8.82324168356949e-06 -0.599008 0.0016575 n.s. >0.05 -0.302998 0.0121959 REST-dependent ERLIN2 11160 ENSG00000147475 O94905
GPC6 -0.605110939960384 0.00321294427451096 -0.550022 0.00943399 n.s. >0.05 n.s. >0.05 REST-dependent GPC6 10082 ENSG00000183098 Q9Y625
EXOC2 -0.604352959226634 2.50273973261671e-07 -0.498823 0.0116316 n.s. >0.05 -0.273427 0.0217606 REST-dependent EXOC2 55770 ENSG00000112685 Q96KP1
PARS2 -0.601639379426875 0.000512806795561188 -0.683545 0.0016575 n.s. >0.05 -0.43344 0.00562876 REST-dependent PARS2 25973 ENSG00000162396 Q7L3T8
MBOAT2 -0.598339006959475 0.000880288811609832 -0.488795 0.0217442 n.s. >0.05 -0.315107 0.00968957 REST-dependent MBOAT2 129642 ENSG00000143797 Q6ZWT7
TBX3 -0.597585294070191 5.35480497892614e-06 -0.567205 0.00403448 n.s. >0.05 -0.346031 0.00413321 REST-dependent TBX3 6926 ENSG00000135111 O15119
NAB1 -0.597301718771743 0.00113688314548412 -0.566158 0.0109013 n.s. >0.05 -0.354242 0.00707175 REST-dependent NAB1 4664 ENSG00000138386 Q13506
CACNA1H -0.590713641964801 4.93876937925652e-06 -0.558175 0.0102315 n.s. >0.05 n.s. >0.05 REST-dependent CACNA1H 8912 ENSG00000196557 O95180
KIF21A -0.588039391509288 0.000637816271706571 -0.558012 0.00554039 n.s. >0.05 n.s. >0.05 REST-dependent KIF21A 55605 ENSG00000139116 Q7Z4S6
FAM120A -0.587533002240276 3.232031504366e-05 -0.582824 0.0120196 n.s. >0.05 n.s. 0.0764781 REST-dependent FAM120A 23196 ENSG00000048828 Q9NZB2
ACACA -0.579728798912409 4.36011619991468e-05 -0.581356 0.00454554 n.s. >0.05 -0.303914 0.0200655 REST-dependent ACACA 31 ENSG00000275176;ENSG00000278540 Q13085
RB1 -0.578634849467021 0.000843230234419993 -0.587201 0.00233451 n.s. >0.05 -0.411215 0.00102747 REST-dependent RB1 5925 ENSG00000139687 P06400
SELRC1 -0.575759843427695 5.6602774776351e-05 -0.578689 0.00504662 n.s. >0.05 -0.40535 0.00124625 REST-dependent COA7 65260 ENSG00000162377 Q96BR5
AGPS -0.570338583476213 0.000321154360228839 -0.520777 0.0109013 n.s. >0.05 -0.386183 0.00228414 REST-dependent AGPS 8540 ENSG00000018510 O00116
GOLIM4 -0.569218491975485 0.000767874283998414 -0.549837 0.0078661 n.s. >0.05 -0.318596 0.0116102 REST-dependent GOLIM4 27333 ENSG00000173905 O00461
SEC14L1 -0.568948142091227 0.000472539196745226 -0.524382 0.03835 n.s. >0.05 -0.417641 0.00676592 REST-dependent SEC14L1 6397 ENSG00000129657 Q92503
KIAA1468 -0.56799072877077 0.000241416352490155 -0.597629 0.006 n.s. >0.05 -0.357149 0.00645213 REST-dependent RELCH 57614 ENSG00000134444 Q9P260
DENND4A -0.565765548207518 0.000531363851789756 -0.559916 0.0102315 n.s. >0.05 n.s. >0.05 REST-dependent DENND4A 10260 ENSG00000174485 Q7Z401
VDR -0.56449585399284 0.00173757827546146 -0.562421 0.0167576 n.s. >0.05 n.s. >0.05 REST-dependent VDR 7421 ENSG00000111424 P11473
ADAMTS3 -0.563658680962658 0.00527282226451996 -0.51663 0.0329592 n.s. >0.05 -0.344265 0.0230099 REST-dependent ADAMTS3 9508 ENSG00000156140 O15072
CACHD1 -0.56294418925943 6.36524335053599e-05 -0.513958 0.00824627 n.s. >0.05 -0.352081 0.00341938 REST-dependent CACHD1 57685 ENSG00000158966 Q5VU97
PLS1 -0.561736105370765 0.000420746783354106 -0.559429 0.006 n.s. >0.05 -0.433666 0.000558687 REST-dependent PLS1 5357 ENSG00000120756 Q14651
PRKCB -0.56167647702251 0.000303304662719584 -0.605072 0.0346267 n.s. >0.05 n.s. >0.05 REST-dependent PRKCB 5579 ENSG00000166501 P05771
CCDC53 -0.561192404228592 0.00271620641407337 -0.513245 0.0446516 n.s. >0.05 -0.367282 0.0323698 REST-dependent WASHC3 51019 ENSG00000120860 Q9Y3C0
CUX2 -0.55689739752052 0.00420333477757334 -0.555414 0.0202134 n.s. >0.05 -0.567737 0.000296959 REST-dependent CUX2 23316 ENSG00000111249 O14529
HSDL2 -0.556799213157705 1.561077959253e-06 -0.524283 0.0102315 n.s. >0.05 n.s. >0.05 REST-dependent HSDL2 84263 ENSG00000119471 Q6YN16
ZKSCAN4 -0.555130122232465 0.00518909552034825 -0.560513 0.030895 n.s. >0.05 -0.61356 0.0007968 REST-dependent ZKSCAN4 387032 ENSG00000187626 Q969J2
ZMYM4 -0.554351760310239 0.000628809647730113 -0.54063 0.00504662 n.s. >0.05 -0.346254 0.00737778 REST-dependent ZMYM4 9202 ENSG00000146463 Q5VZL5
MIPOL1 -0.552364845311122 0.0056297356200371 -0.511745 0.0285901 n.s. >0.05 n.s. >0.05 REST-dependent MIPOL1 145282 ENSG00000151338 Q8TD10
PLRG1 -0.55135302413157 5.7012468463952e-07 -0.442588 0.0341929 n.s. >0.05 -0.255893 0.0360247 REST-dependent PLRG1 5356 ENSG00000171566 O43660
ARID3A -0.55092548058286 1.67709453444743e-05 -0.528153 0.0127682 n.s. >0.05 n.s. >0.05 REST-dependent ARID3A 1820 ENSG00000116017 Q99856
GIPC3 -0.55090492880663 0.000542951180830511 -0.570312 0.0147234 n.s. >0.05 -0.418803 0.00514422 REST-dependent GIPC3 126326 ENSG00000179855 Q8TF64
MPND -0.547370256660028 0.00543491336021811 -0.635065 0.00824627 n.s. >0.05 -0.450666 0.00207861 REST-dependent MPND 84954 ENSG00000008382 Q8N594
SLMAP -0.547243028215092 0.000223187128977326 -0.477107 0.0249191 n.s. >0.05 -0.373914 0.00207861 REST-dependent SLMAP 7871 ENSG00000163681 Q14BN4
HEATR1 -0.547178754855519 0.00224245545363117 -0.540495 0.00693636 n.s. >0.05 -0.302574 0.0205502 REST-dependent HEATR1 55127 ENSG00000119285 Q9H583
TMEM194A -0.546598060507552 0.000749398513168631 -0.481384 0.0177816 n.s. >0.05 -0.368675 0.00268012 REST-dependent NEMP1 23306 ENSG00000166881 O14524
ANKIB1 -0.546094841994707 0.00405044166157642 -0.52292 0.015501 n.s. >0.05 n.s. >0.05 REST-dependent ANKIB1 54467 ENSG00000001629 Q9P2G1
TCF12 -0.546071017450318 0.00377648397897303 -0.510356 0.0204927 n.s. >0.05 -0.374957 0.00167134 REST-dependent TCF12 6938 ENSG00000140262 Q99081
CDK19 -0.545518709116942 0.000749966202318908 -0.565639 0.00986453 n.s. >0.05 -0.463704 0.000296959 REST-dependent CDK19 23097 ENSG00000155111 Q9BWU1
COL4A5 -0.545158401132195 0.00203622482330159 -0.503953 0.0234724 n.s. >0.05 -0.342813 0.00893674 REST-dependent COL4A5 1287 ENSG00000188153 P29400
SLITRK3 -0.543095266412912 0.00575900020459473 -0.52597 0.031973 n.s. >0.05 -0.259209 >0.05 REST-dependent SLITRK3 22865 ENSG00000121871 O94933
TYRO3 -0.540106594862437 2.47149107834935e-06 -0.446825 0.0381184 -0.304574392937849 0.0436721339826663 n.s. >0.05 REST-dependent TYRO3 7301 ENSG00000092445 Q06418
NNT -0.539761561310067 0.000215733651058938 -0.545852 0.00693636 n.s. >0.05 n.s. >0.05 REST-dependent NNT 23530 ENSG00000112992 Q13423
C4orf32 -0.536103054372528 0.00246647442520413 -0.477096 0.0378671 n.s. >0.05 -0.341725 0.0129935 REST-dependent FAM241A 132720 ENSG00000174749 Q8N8J7
AMMECR1 -0.535756464684548 0.0018334878377984 -0.521179 0.00943399 n.s. >0.05 -0.374493 0.00124625 REST-dependent AMMECR1 9949 ENSG00000101935 Q9Y4X0
ZBTB17 -0.535551403346322 0.00193777472684801 -0.531931 0.0240882 n.s. >0.05 -0.421184 0.00612334 REST-dependent ZBTB17 7709 ENSG00000116809 Q13105
GBF1 -0.535286030178597 2.37069634331385e-05 -0.459126 0.0255289 n.s. >0.05 n.s. >0.05 REST-dependent GBF1 8729 ENSG00000107862 Q92538
ZADH2 -0.532837287407446 4.48683446658647e-05 -0.472801 0.0243862 n.s. >0.05 n.s. >0.05 REST-dependent ZADH2 284273 ENSG00000180011 Q8N4Q0
ARHGEF26 -0.532666130778721 0.000149209018579843 -0.546022 0.0112456 n.s. >0.05 -0.360126 0.00529474 REST-dependent ARHGEF26 26084 ENSG00000277101;ENSG00000114790 Q96DR7
PIGN -0.532368747520964 0.000752003308228481 -0.529194 0.0174474 n.s. >0.05 -0.309176 0.0181318 REST-dependent PIGN 23556 ENSG00000197563 O95427
MAP3K4 -0.530983490087352 3.01120112724685e-05 -0.472013 0.0260877 n.s. >0.05 n.s. >0.05 REST-dependent MAP3K4 4216 ENSG00000085511 Q9Y6R4
TAOK3 -0.530844697948374 0.0014196656012582 -0.473517 0.0360362 n.s. >0.05 -0.188259 >0.05 REST-dependent TAOK3 51347 ENSG00000135090 Q9H2K8
GANAB -0.527781335125209 1.55596170233987e-08 -0.491338 0.0109013 0.397562425646274 0.000318127798693508 0.392633 0.00102747 REST-dependent GANAB 23193 ENSG00000089597 Q14697
ISG20L2 -0.522395819308248 4.82877990162368e-07 -0.46771 0.0220606 n.s. >0.05 n.s. >0.05 REST-dependent ISG20L2 81875 ENSG00000143319 Q9H9L3
SRSF8 -0.521947210798641 1.00220783523386e-05 -0.480091 0.0204927 n.s. >0.05 -0.304395 0.0116102 REST-dependent SRSF8 10929 ENSG00000263465 Q9BRL6
MMS19 -0.516703419224564 3.87646123953462e-06 -0.531771 0.00865253 n.s. >0.05 -0.290719 0.0181318 REST-dependent MMS19 64210 ENSG00000155229 Q96T76
SFXN3 -0.515911869104946 0.0012957859272835 -0.541968 0.0225537 n.s. >0.05 -0.472351 0.00228414 REST-dependent SFXN3 81855 ENSG00000107819 Q9BWM7
PTPRK -0.515797448700056 0.00248460475857502 -0.475207 0.0265939 n.s. >0.05 n.s. >0.05 REST-dependent PTPRK 5796 ENSG00000152894;ENSG00000273993 Q15262
SNX29 -0.514357730015168 0.00280130245826669 -0.470208 0.0430966 n.s. >0.05 -0.0924152 >0.05 REST-dependent SNX29 92017 ENSG00000048471 Q8TEQ0
EPB41 -0.509727503765706 3.36109564760504e-05 -0.52049 0.0444676 n.s. >0.05 n.s. >0.05 REST-dependent EPB41 2035 ENSG00000159023 P11171
DHX37 -0.508231252093304 5.99719410270223e-06 -0.478808 0.0180551 n.s. >0.05 n.s. >0.05 REST-dependent DHX37 57647 ENSG00000150990 Q8IY37
PPM1H -0.507252129223441 0.00294777648934562 -0.44726 0.0413783 n.s. >0.05 -0.353895 0.00691667 REST-dependent PPM1H 57460 ENSG00000111110 Q9ULR3
TRAPPC11 -0.503753493793354 0.000572656780211792 -0.463776 0.0322901 n.s. >0.05 -0.441718 0.000296959 REST-dependent TRAPPC11 60684 ENSG00000168538 Q7Z392
PPP2R5E -0.503736835439399 0.00484646155862715 -0.503438 0.0186819 n.s. >0.05 -0.369624 0.00286777 REST-dependent PPP2R5E 5529 ENSG00000154001 Q16537
BECN1 -0.50192395258156 8.96668208945314e-05 -0.442491 0.0473355 n.s. >0.05 n.s. >0.05 REST-dependent BECN1 8678 ENSG00000126581 Q14457
DYM -0.501834422343099 0.00012961375934329 -0.47343 0.0275332 n.s. >0.05 -0.270209 0.0321313 REST-dependent DYM 54808 ENSG00000141627 Q7RTS9
MEF2C -0.50149800972353 0.00189856173246543 -0.598149 0.00741738 n.s. >0.05 -0.48864 0.000296959 REST-dependent MEF2C 4208 ENSG00000081189 Q06413
ICAM5 -0.498894391761132 0.000579244692684452 -0.527165 0.0199429 n.s. >0.05 -0.310557 0.0360247 REST-dependent ICAM5 7087 ENSG00000105376 Q9UMF0
DPP9 -0.494733124409963 4.53902943636152e-06 -0.499342 0.0147234 n.s. >0.05 n.s. >0.05 REST-dependent DPP9 91039 ENSG00000142002 Q86TI2
RDX -0.493879451955023 0.00308044164683008 -0.449142 0.0280346 n.s. >0.05 -0.346829 0.00879114 REST-dependent RDX 5962 ENSG00000137710 P35241
PXK -0.493142719555976 0.000721250516228471 -0.449497 0.0473355 n.s. >0.05 -0.294305 0.0356032 REST-dependent PXK 54899 ENSG00000168297 Q7Z7A4
LRP5 -0.490522711962777 2.53343981660634e-05 -0.504498 0.0160124 n.s. >0.05 -0.266067 0.0258474 REST-dependent LRP5 4041 ENSG00000162337 O75197
TTC37 -0.490189233572615 0.00203376753149915 -0.435869 0.0418306 n.s. >0.05 -0.343311 0.00660227 REST-dependent TTC37 9652 ENSG00000198677 Q6PGP7
EFR3A -0.488166354608002 0.00610511537399865 -0.474257 0.0282745 n.s. >0.05 n.s. >0.05 REST-dependent EFR3A 23167 ENSG00000132294 Q14156
MSRB3 -0.48719403111648 0.0017339181174563 -0.448827 0.0499928 n.s. >0.05 -0.305743 0.0254541 REST-dependent MSRB3 253827 ENSG00000174099 Q8IXL7
CABLES1 -0.485251378229262 2.32897056703314e-05 -0.418124 0.0413783 n.s. >0.05 n.s. >0.05 REST-dependent CABLES1 91768 ENSG00000134508 Q8TDN4
MAST1 -0.485153870923475 0.00124778665621727 -0.5891 0.00504662 n.s. >0.05 n.s. >0.05 REST-dependent MAST1 22983 ENSG00000105613 Q9Y2H9
C9orf78 -0.48276539661728 2.48549980584141e-05 -0.43434 0.0402205 n.s. >0.05 n.s. >0.05 REST-dependent C9orf78 51759 ENSG00000136819 Q9NZ63
ADCY9 -0.48173611194926 0.00164390128248781 -0.489354 0.0220606 n.s. >0.05 n.s. >0.05 REST-dependent ADCY9 115 ENSG00000162104 O60503
RBM45 -0.480968097350743 0.00243815440537811 -0.577106 0.00943399 n.s. >0.05 -0.423003 0.00305388 REST-dependent RBM45 129831 ENSG00000155636 Q8IUH3
PPIP5K2 -0.480397521215145 0.00620307674795359 -0.442844 0.0446516 n.s. >0.05 n.s. >0.05 REST-dependent PPIP5K2 23262 ENSG00000145725 O43314
HDAC1 -0.479748870035098 5.0592722010551e-07 -0.46306 0.0196202 -0.257346435001907 0.0430345201632102 n.s. >0.05 REST-dependent HDAC1 3065 ENSG00000116478 Q13547
MEX3A -0.479120283156892 0.000147190160737527 -0.490512 0.0208063 n.s. >0.05 n.s. >0.05 REST-dependent MEX3A 92312 ENSG00000254726 A1L020
TTF2 -0.477676253583143 0.0015269606403668 -0.47241 0.0202134 n.s. >0.05 -0.280356 0.0365567 REST-dependent TTF2 8458 ENSG00000116830 Q9UNY4
NUP160 -0.476477774643837 0.000805706998977206 -0.481858 0.01899 n.s. >0.05 -0.312253 0.0162808 REST-dependent NUP160 23279 ENSG00000030066 Q12769
DIP2A -0.476208805420046 0.000250133787481748 -0.481644 0.0456502 n.s. >0.05 -0.351959 0.0134158 REST-dependent DIP2A 23181 ENSG00000160305 Q14689
LAMB1 -0.47604001571874 2.73593797616682e-05 -0.487097 0.0144228 n.s. >0.05 n.s. >0.05 REST-dependent LAMB1 3912 ENSG00000091136 P07942
PARP4 -0.474193399291443 0.00289086892288739 -0.479079 0.0258166 n.s. >0.05 -0.337186 0.00514422 REST-dependent PARP4 143 ENSG00000102699 Q9UKK3
NIPAL3 -0.468984037515577 0.00199960364435345 -0.442073 0.0409416 n.s. >0.05 -0.319888 0.00879114 REST-dependent NIPAL3 57185 ENSG00000001461 Q6P499
FBXO18 -0.462932443536728 5.08746461599885e-05 -0.465409 0.0252249 n.s. >0.05 n.s. >0.05 REST-dependent FBH1 84893 ENSG00000134452 Q8NFZ0
ESYT1 -0.459030457688196 2.48465005248654e-05 -0.41867 0.039038 n.s. >0.05 n.s. 0.216452 REST-dependent ESYT1 23344 ENSG00000139641 Q9BSJ8
SRGAP2 -0.457149777360086 0.00135497145839325 -0.460402 0.0373983 n.s. >0.05 -0.251542 0.0498287 REST-dependent SRGAP2 23380 ENSG00000266028 O75044
LAMC1 -0.457001015819791 0.0010121906505075 -0.411588 0.0499928 n.s. >0.05 n.s. >0.05 REST-dependent LAMC1 3915 ENSG00000135862 P11047
FAM114A2 -0.456861868303396 0.000745779761618884 -0.524733 0.0157545 n.s. >0.05 -0.366068 0.00676592 REST-dependent FAM114A2 10827 ENSG00000055147 Q9NRY5
RNH1 -0.456679678192844 0.000579240115515456 -0.427678 0.0376333 n.s. >0.05 -0.333354 0.010581 REST-dependent RNH1 6050 ENSG00000023191;ENSG00000276230 P13489
WDHD1 -0.453492745768085 0.000497062102974804 -0.445725 0.0314201 n.s. >0.05 -0.298612 0.0138196 REST-dependent WDHD1 11169 ENSG00000198554 O75717
OXCT1 -0.451839375566136 8.24600360144419e-05 -0.439463 0.0343929 n.s. >0.05 -0.259312 0.0331165 REST-dependent OXCT1 5019 ENSG00000083720 P55809
TMEM175 -0.451326632016633 0.00525862661413056 -0.544599 0.0199429 n.s. >0.05 -0.432157 0.00464901 REST-dependent TMEM175 84286 ENSG00000127419 Q9BSA9
GPAM -0.450939580081847 0.00331286202211015 -0.435713 0.0369801 n.s. >0.05 -0.336157 0.00497304 REST-dependent GPAM 57678 ENSG00000119927 Q9HCL2
TRIP12 -0.450564515830375 0.00324510934841181 -0.410049 0.0499928 n.s. >0.05 -0.280881 0.0334848 REST-dependent TRIP12 9320 ENSG00000153827 Q14669
WNT5A -0.450469452405554 0.00276943366051814 -0.482602 0.0294667 n.s. >0.05 -0.306148 0.0194071 REST-dependent WNT5A 7474 ENSG00000114251 P41221
HSPA4L -0.449190679372439 0.00521377480435269 -0.426244 0.0461563 n.s. >0.05 -0.274526 0.0270754 REST-dependent HSPA4L 22824 ENSG00000164070 O95757
CNKSR3 -0.449070909281029 0.000773314292798153 -0.480296 0.031973 n.s. >0.05 n.s. >0.05 REST-dependent CNKSR3 154043 ENSG00000153721 Q6P9H4
RRNAD1 -0.447435564125521 0.00554256434454127 -0.475249 0.0451836 n.s. >0.05 -0.268414 >0.05 REST-dependent METTL25B 51093 ENSG00000143303 Q96FB5
SHB -0.446772229127179 0.000293469525811598 -0.454779 0.0381184 n.s. >0.05 -0.278675 0.0237727 REST-dependent SHB 6461 ENSG00000107338 Q15464
ZNF252 -0.442159927371925 0.00442577451089757 -0.577538 0.0282745 n.s. >0.05 n.s. >0.05 REST-dependent ZNF252P 286101 ENSG00000196922
ARAP1 -0.437189804728981 4.34897201886213e-05 -0.426672 0.0444676 n.s. >0.05 -0.267906 0.0260706 REST-dependent ARAP1 116985 ENSG00000186635 Q96P48
WDR59 -0.43392445147542 0.000110424848803123 -0.434671 0.0430966 n.s. >0.05 -0.299448 0.0127499 REST-dependent WDR59 79726 ENSG00000103091 Q6PJI9
SEC24C -0.431254693405175 0.000121754895020757 -0.427631 0.0327321 n.s. >0.05 -0.229905 >0.05 REST-dependent SEC24C 9632 ENSG00000176986 P53992
TBC1D4 -0.423111323808466 0.00192501252092723 -0.419386 0.0400169 n.s. >0.05 -0.105913 >0.05 REST-dependent TBC1D4 9882 ENSG00000136111 O60343
SDHB -0.420548535023329 0.00193008528169333 -0.432955 0.0346267 n.s. >0.05 -0.298476 0.0252505 REST-dependent SDHB 6390 ENSG00000117118 P21912
IPO8 -0.415088790780474 0.00257365752851586 -0.42293 0.0381184 n.s. >0.05 -0.330023 0.0144134 REST-dependent IPO8 10526 ENSG00000133704 O15397
SKIV2L2 -0.415069855161021 5.05587006543462e-05 -0.462084 0.031973 n.s. >0.05 -0.289297 0.040084 REST-dependent MTREX 23517 ENSG00000039123 P42285
DNMT3B -0.414839574357849 0.000967902996436637 -0.428081 0.0491111 n.s. >0.05 -0.311759 0.00998365 REST-dependent DNMT3B 1789 ENSG00000088305 Q9UBC3
CDC42BPB -0.411431417658903 0.00220566580628871 -0.4618 0.0243862 n.s. >0.05 n.s. >0.05 REST-dependent CDC42BPB 9578 ENSG00000198752 Q9Y5S2
MBD1 -0.366883528491623 0.00227868699761824 -0.495359 0.01899 n.s. >0.05 -0.347658 0.00579575 REST-dependent MBD1 4152 ENSG00000141644 Q9UIS9
Raw
cavadas-et-al-2016-suppl-table-3-augmented.tsv
Gene_ID edger_log2_fc edger_q cuffdiff_log2_fc cuffdiff_q symbol_from_mygene entrez_gene ensembl_gene uniprot
ZCCHC3 0.382889558986277 0.000227082939294487 0.393824 0.00261295 ZCCHC3 85364 ENSG00000247315 Q9NUD5
NUDCD3 0.431530876872248 9.70547366357153e-05 0.409794 0.00484022 NUDCD3 23386 ENSG00000015676 Q8IVD9
ZBTB5 0.44340274463068 0.00037543322375191 0.467225 0.00261295 ZBTB5 9925 ENSG00000168795 O15062
TRAF3 0.449002006578715 0.000141770452309285 0.421286 0.00685557 TRAF3 7187 ENSG00000131323 Q13114
BEX1 0.450395862812105 0.000241936488855803 0.499271 0.00261295 BEX1 55859 ENSG00000133169 Q9HBH7
PDE8A 0.455024447649373 0.000174127810615267 0.478112 0.00261295 PDE8A 5151 ENSG00000073417 O60658
FGFR3 0.456020030120144 3.86017701247188e-05 0.492167 0.00261295 FGFR3 2261 ENSG00000068078 P22607
ADAM15 0.468318505804615 1.94430397135625e-05 0.483934 0.00261295 ADAM15 8751 ENSG00000143537 Q13444
SNAI2 0.470308073703485 3.36161780803284e-05 0.463567 0.00261295 SNAI2 6591 ENSG00000019549 O43623
STX12 0.475597338181097 0.000182867991060082 0.491601 0.00261295 STX12 23673 ENSG00000117758 Q86Y82
SPIRE2 0.483643659133069 0.000119851507810676 0.497432 0.00261295 SPIRE2 84501 ENSG00000204991 Q8WWL2
MADD 0.4875782476483 8.47962693105555e-06 0.411005 0.00261295 MADD 8567 ENSG00000110514 Q8WXG6
SARM1 0.494680804267802 3.64791983684864e-06 0.76984 0.00484022 SARM1 23098 ENSG00000004139 Q6SZW1
ZW10 0.497182250816385 1.61124098737176e-05 0.499453 0.00261295 ZW10 9183 ENSG00000086827 O43264
BICD2 0.503324122466868 6.89643973368376e-05 0.473701 0.00261295 BICD2 23299 ENSG00000185963 Q8TD16
JPH3 0.506682326714223 2.00647987430316e-05 0.4927 0.00261295 JPH3 57338 ENSG00000154118 Q8WXH2
TMEM180 0.515401953279755 1.87928507361045e-05 0.477206 0.00261295 MFSD13A 79847 ENSG00000138111 Q14CX5
PLEKHG4 0.516239422046692 7.74784260001457e-05 0.535759 0.00261295 PLEKHG4 25894 ENSG00000196155 Q58EX7
RAB11FIP4 0.524345295168559 3.51611645037783e-06 0.639294 0.00261295 RAB11FIP4 84440 ENSG00000131242 Q86YS3
ELOVL2 0.537321238674618 0.000220713268322025 0.470245 0.00261295 ELOVL2 54898 ENSG00000197977 Q9NXB9
OGFR 0.546903538157569 0.000123398241489851 0.527174 0.00261295 OGFR 11054 ENSG00000060491 Q9NZT2
ZNF589 0.54891644775764 0.000185827575607876 0.476262 0.00261295 ZNF589 51385 ENSG00000164048 Q86UQ0
GANAB 0.556486807529301 1.60798301100634e-09 0.556404 0.00261295 GANAB 23193 ENSG00000089597 Q14697
HSDL2 0.560009110582371 3.99970591249801e-07 0.524526 0.00261295 HSDL2 84263 ENSG00000119471 Q6YN16
PCNXL3 0.561478185811177 7.22320002582182e-07 0.499606 0.00261295 PCNX3 399909 ENSG00000197136 Q9H6A9
SLC39A3 0.569726297301787 3.18173045113256e-05 0.548901 0.00261295 SLC39A3 29985 ENSG00000141873 Q9BRY0
SLC33A1 0.582102007937361 0.00044470294733485 0.639552 0.00261295 SLC33A1 9197 ENSG00000169359 O00400
NES 0.58761859688475 0.000422163394017777 0.569759 0.00261295 NES 10763 ENSG00000132688 P48681
NOLC1 0.599134955284338 1.56870405482727e-11 0.583647 0.00261295 NOLC1 9221 ENSG00000166197 Q14978
ANKRD13B 0.605146955766846 7.57939705766804e-07 0.456391 0.00261295 ANKRD13B 124930 ENSG00000198720 Q86YJ7
MESDC2 0.606582153971173 1.5119154397713e-07 0.59893 0.00261295 MESD 23184 ENSG00000117899 Q14696
PRSS12 0.610292679554462 1.96815783714875e-05 0.528236 0.00484022 PRSS12 8492 ENSG00000164099 P56730
SLC16A9 0.625908184396601 4.50451493434194e-06 0.560633 0.00261295 SLC16A9 220963 ENSG00000165449 Q7RTY1
SYT2 0.634716911651015 3.71972742518525e-05 0.72228 0.00261295 SYT2 127833 ENSG00000143858 Q8N9I0
PPP1R9A 0.637652714307725 0.00022279761023483 0.447647 0.0275825 PPP1R9A 55607 ENSG00000158528 Q9ULJ8
APLP1 0.640039195895887 5.67828997010327e-05 0.591311 0.00261295 APLP1 333 ENSG00000105290 P51693
PDZD4 0.643064943142465 9.72508159885106e-06 0.526175 0.00261295 PDZD4 57595 ENSG00000067840 Q76G19
MED11 0.665149339411692 6.94768230659496e-06 0.483572 0.0486764 MED11 400569 ENSG00000161920 Q9P086
ARHGEF9 0.666035674145738 4.13654081913045e-06 0.625673 0.00261295 ARHGEF9 23229 ENSG00000131089 O43307
ALPL 0.667771059747058 3.11025434143772e-05 0.567181 0.00261295 ALPL 249 ENSG00000162551 P05186
NPTX2 0.669570427855812 4.45944702294165e-08 0.668261 0.00261295 NPTX2 4885 ENSG00000106236 P47972
CRMP1 0.724382592842755 8.63468158446751e-11 0.741921 0.00261295 CRMP1 1400 ENSG00000072832 Q14194
EMILIN2 0.730356210985047 1.38862342132304e-07 0.641156 0.00261295 EMILIN2 84034 ENSG00000132205 Q9BXX0
TUBB3 0.742846966262016 7.23953943312075e-07 0.806968 0.00261295 TUBB3 10381 ENSG00000258947 Q13509
STMN3 0.763733962939348 1.99568888500241e-08 0.779429 0.00261295 STMN3 50861 ENSG00000197457 Q9NZ72
CAMKV 0.764726732322841 7.78835281028978e-11 0.733598 0.00261295 CAMKV 79012 ENSG00000164076 Q8NCB2
NELL2 0.769508036595389 8.6987743992673e-13 0.779593 0.00261295 NELL2 4753 ENSG00000184613 Q99435
HIC1 0.776387832540931 3.51661569085188e-06 0.769503 0.00261295 HIC1 3090 ENSG00000177374 Q14526
GDAP1 0.77761773020829 8.81766334668024e-11 0.791091 0.00261295 GDAP1 54332 ENSG00000104381 Q8TB36
RAB3C 0.778393215577245 7.52466942142756e-06 0.96473 0.00261295 RAB3C 115827 ENSG00000152932 Q96E17
ZNF267 0.778662185134161 4.12118622561443e-06 0.774775 0.00261295 ZNF267 10308 ENSG00000185947 Q14586
OGDHL 0.78082034151526 2.27183295805026e-10 0.795702 0.00261295 OGDHL 55753 ENSG00000197444 Q9ULD0
SETD7 0.781762430248094 1.24668384770574e-05 0.822525 0.00261295 SETD7 80854 ENSG00000145391 Q8WTS6
SLC6A17 0.782981859503685 3.1482484594141e-05 0.981465 0.00261295 SLC6A17 388662 ENSG00000197106 Q9H1V8
ATP1A3 0.806314298598654 8.175523344164e-13 0.798917 0.00261295 ATP1A3 478 ENSG00000105409 P13637
GABBR2 0.810116708592521 2.22218885897304e-06 0.813489 0.00261295 GABBR2 9568 ENSG00000136928 O75899
ZNF587B 0.815919809069529 6.15829700595933e-05 0.531862 0.0226714 ZNF587B 100293516 ENSG00000269343 E7ETH6
FBXO41 0.86291552237216 2.52995581942603e-09 0.876807 0.00261295 FBXO41 150726 ENSG00000163013 Q8TF61
LRRC16B 0.866183969751958 1.79965648382392e-06 1.04437 0.00261295 CARMIL3 90668 ENSG00000186648;ENSG00000284765 Q8ND23
HCN3 0.868258058136611 1.2102660474932e-06 0.95442 0.00261295 HCN3 57657 ENSG00000143630;ENSG00000263324 Q9P1Z3
SYT7 0.89045114341515 2.11844711714659e-11 0.871373 0.00261295 SYT7 9066 ENSG00000011347 O43581
GPRIN1 0.893704863851566 1.22628107121602e-15 0.872476 0.00261295 GPRIN1 114787 ENSG00000169258 Q7Z2K8
PHF21B 0.900207137575993 2.62284055611803e-12 1.00153 0.00261295 PHF21B 112885 ENSG00000056487 Q96EK2
RAP1GAP 0.909270428170442 9.00406615065694e-11 0.940516 0.00261295 RAP1GAP 5909 ENSG00000076864 P47736
MAPK8IP1 0.911622446666283 4.48337095821095e-13 0.85146 0.00261295 MAPK8IP1 9479 ENSG00000121653 Q9UQF2
G3BP2 0.911757571493318 3.62212888547027e-13 0.910728 0.00261295 G3BP2 9908 ENSG00000138757 Q9UN86
C3orf14 0.930023825918398 1.31686896885438e-10 0.815563 0.00261295 C3orf14 57415 ENSG00000114405 Q9HBI5
KCNC1 0.945162200268299 6.27712559351441e-12 0.921648 0.00261295 KCNC1 3746 ENSG00000129159 P48547
ZNF616 0.946552333173961 7.58439758977047e-06 1.06031 0.00261295 ZNF616 90317 ENSG00000204611 Q08AN1
HABP4 0.960267973209592 4.76112882385816e-12 1.02694 0.00261295 HABP4 22927 ENSG00000130956 Q5JVS0
ACSL6 0.979287822696932 1.36554131204846e-07 0.915439 0.00261295 ACSL6 23305 ENSG00000164398 Q9UKU0
INA 0.992433918336146 2.28651324965371e-15 0.988892 0.00261295 INA 9118 ENSG00000148798 Q16352
KREMEN2 1.00411067204059 2.66949503167638e-08 0.793492 0.00261295 KREMEN2 79412 ENSG00000131650 Q8NCW0
NFASC 1.00621542041672 3.88940766805179e-08 0.8168 0.00484022 NFASC 23114 ENSG00000163531 O94856
C6orf174 1.00996675857834 5.4764727375749e-05 1.07604 0.00261295 SOGA3 387104 ENSG00000214338 Q5TF21
RTN2 1.01154036688428 4.11034722092303e-12 0.61835 0.00261295 RTN2 6253 ENSG00000125744 O75298
CASP7 1.03176960179251 8.24903823233223e-15 0.976789 0.00261295 CASP7 840 ENSG00000165806 P55210
UNC5A 1.04413138223036 1.45107999568129e-08 0.974899 0.00261295 UNC5A 90249 ENSG00000113763 Q6ZN44
MAPK8IP2 1.04775864538147 2.16508687448314e-19 1.01595 0.00261295 MAPK8IP2 23542 ENSG00000008735 Q13387
GNG4 1.05399135505572 4.40704084835017e-23 1.01639 0.00261295 GNG4 2786 ENSG00000168243;ENSG00000282972 P50150
SLC5A5 1.05555184931742 6.144659323551e-05 0.911563 0.00261295 SLC5A5 6528 ENSG00000105641 Q92911
SEZ6L2 1.09254436606521 2.22924446880072e-19 1.04875 0.00261295 SEZ6L2 26470 ENSG00000174938 Q6UXD5
TPM4 1.0990052342698 1.41739206155779e-26 1.10321 0.00261295 TPM4 7171 ENSG00000167460 P67936
SCN8A 1.10508679506467 9.40590783867887e-09 1.12934 0.00261295 SCN8A 6334 ENSG00000196876 Q9UQD0
FSTL4 1.10730344388917 4.72907227489291e-06 1.12674 0.00261295 FSTL4 23105 ENSG00000053108 Q6MZW2
PRUNE2 1.12229061228419 7.66035721528137e-08 1.18864 0.00261295 PRUNE2 158471 ENSG00000106772 Q8WUY3
PGBD5 1.12776603636253 1.3008707060059e-22 1.13928 0.00261295 PGBD5 79605 ENSG00000177614 Q8N414
FGF12 1.15683958500019 2.58719694853653e-06 1.37741 0.00261295 FGF12 2257 ENSG00000114279 P61328
CABP1 1.16955295431666 9.78629059276369e-10 1.09071 0.00261295 CABP1 9478 ENSG00000157782 Q9NZU7
SCAMP5 1.20594385984799 4.45956362949506e-26 1.19241 0.00261295 SCAMP5 192683 ENSG00000198794 Q8TAC9
GNAO1 1.22397740951348 9.73635793514394e-22 1.20435 0.00261295 GNAO1 2775 ENSG00000087258 P09471
STXBP5L 1.25612228931171 5.07358615109746e-07 1.29303 0.00261295 STXBP5L 9515 ENSG00000145087 Q9Y2K9
CECR6 1.30226072438933 7.02682177439717e-14 1.28806 0.00261295 TMEM121B 27439 ENSG00000183307 Q9BXQ6
PHYHIPL 1.30856238428911 7.12681898944977e-06 2.40242 0.00261295 PHYHIPL 84457 ENSG00000165443 Q96FC7
RAB39A 1.32749508492671 4.55120813331528e-05 1.249 0.00261295 RAB39A 54734 ENSG00000179331 Q14964
VSTM2L 1.33774722932378 1.27224543911306e-08 1.36387 0.00261295 VSTM2L 128434 ENSG00000132821 Q96N03
NEFM 1.39587901576851 1.01190717570779e-32 1.38212 0.00261295 NEFM 4741 ENSG00000104722 P07197
FAM155A 1.47946521069402 4.78689117834932e-08 1.57095 0.00261295 FAM155A 728215 ENSG00000204442 B1AL88
SYT14 1.52126232454381 1.20847138039461e-06 1.3614 0.00261295 SYT14 255928 ENSG00000143469 Q8NB59
SRRM3 1.5230059322618 6.4375687262026e-24 1.55917 0.00261295 SRRM3 222183 ENSG00000177679 A0A087X0W5;A0A087WXA3
KCNC3 1.54925597815961 2.20050581224117e-10 1.51008 0.00261295 KCNC3 3748 ENSG00000131398 Q14003
DISP2 1.55348109252442 2.87089297189683e-19 1.63039 0.00261295 DISP2 85455 ENSG00000140323 A7MBM2
SPTBN4 1.57545369323452 8.45377132873847e-18 1.91168 0.00261295 SPTBN4 57731 ENSG00000160460 Q9H254
CELSR3 1.61406789577409 4.64524433869782e-22 1.5571 0.00261295 CELSR3 1951 ENSG00000008300 Q9NYQ7
ANK1 1.64673074953321 1.48577293242206e-18 1.63418 0.00261295 ANK1 286 ENSG00000029534 P16157
TMEM198 1.65116453488797 9.52754826045317e-28 1.76466 0.00261295 TMEM198 130612 ENSG00000188760 Q66K66
SLC8A2 1.68537180721927 7.68861578549125e-09 1.89326 0.00261295 SLC8A2 6543 ENSG00000118160 Q9UPR5
DLGAP3 1.69679003271096 9.12241158403394e-20 1.71347 0.00261295 DLGAP3 58512 ENSG00000116544 O95886
SYP 1.70923177501835 1.4464783987022e-39 1.6999 0.00261295 SYP 6855 ENSG00000102003 P08247
POU4F2 1.7466952375221 1.47755750506566e-06 1.57323 0.00261295 POU4F2 5458 ENSG00000151615 Q12837
RIMS2 1.77339328295021 4.03988918931649e-12 1.76682 0.00261295 RIMS2 9699 ENSG00000176406 Q9UQ26
TMEM179 1.77777994384538 1.00957129111637e-06 2.06216 0.00261295 TMEM179 388021 ENSG00000258986;ENSG00000276342 Q6ZVK1
NCAN 1.80720377132566 1.08830174908988e-14 1.62407 0.00261295 NCAN 1463 ENSG00000130287 O14594
CAMK2N2 1.82682373347405 1.48231752014188e-24 1.57336 0.00261295 CAMK2N2 94032 ENSG00000163888 Q96S95
TMEM145 1.84861840330233 1.34628233427837e-32 1.86188 0.00261295 TMEM145 284339 ENSG00000167619 Q8NBT3
HPCA 1.87566660643629 6.41464328559689e-11 3.42045 0.0106469 HPCA 3208 ENSG00000121905 P84074
SCN3B 1.89038605984404 6.33723391679542e-18 1.81313 0.00261295 SCN3B 55800 ENSG00000166257 Q9NY72
MMP24 1.89313917608651 4.76245642209632e-42 1.94438 0.00261295 MMP24 10893 ENSG00000125966 Q9Y5R2
CCDC64 1.91790107036428 1.69458989392787e-29 1.77847 0.00261295 BICDL1 92558 ENSG00000135127 Q6ZP65
KCNB1 1.91843560655584 1.56342648475267e-11 2.31712 0.00261295 KCNB1 3745 ENSG00000158445 Q14721
RLTPR 1.94262161999969 1.64931513245837e-46 1.97648 0.00261295 CARMIL2 146206 ENSG00000159753 Q6F5E8
GABRD 1.97372629752516 1.22779343193801e-21 2.07902 0.00261295 GABRD 2563 ENSG00000187730 O14764
CELF4 1.99159445052106 3.94504261365241e-11 2.00015 0.00261295 CELF4 56853 ENSG00000101489 Q9BZC1
BSN 2.02000342344622 2.88031845859217e-16 1.98891 0.00261295 BSN 8927 ENSG00000164061 Q9UPA5
STMN2 2.11249592511635 1.22449212036284e-10 2.33538 0.00261295 STMN2 11075 ENSG00000104435 Q93045
CACNA1B 2.12675908469947 5.31396574204759e-34 2.17356 0.00261295 CACNA1B 774 ENSG00000148408 Q00975
PTCHD2 2.1494526403435 4.35035285841326e-15 1.97751 0.00261295 DISP3 57540 ENSG00000204624 Q9P2K9
KCNK12 2.16219707071614 4.7621678062369e-07 2.39715 0.00261295 KCNK12 56660 ENSG00000184261 Q9HB15
PTPRN2 2.24012756495621 7.06543310601813e-17 2.04725 0.00261295 PTPRN2 5799 ENSG00000282185;ENSG00000155093 Q92932
KCNH4 2.2735961081283 5.4652912838148e-10 2.37951 0.00261295 KCNH4 23415 ENSG00000089558 Q9UQ05
GRM2 2.36964184533721 2.87554286834137e-07 2.41284 0.0167689 GRM2 2912 ENSG00000164082 Q14416
PSD 2.40366094304186 5.18015733781615e-26 2.28648 0.00261295 PSD 5662 ENSG00000059915 A5PKW4
VSTM2A 2.40488181278444 1.31029735918435e-06 2.28833 0.00877391 VSTM2A 222008 ENSG00000170419 Q8TAG5
VGF 2.42531208360079 5.77331685031272e-31 2.52359 0.00261295 VGF 7425 ENSG00000128564 O15240
SMPD3 2.46317737724413 5.65776607554974e-24 2.46087 0.00261295 SMPD3 55512 ENSG00000103056 Q9NY59
CPLX1 2.56173925840373 9.99527686155587e-88 2.4868 0.00261295 CPLX1 10815 ENSG00000168993 O14810
AP3B2 2.59942738113802 1.72895110080721e-77 2.6157 0.00261295 AP3B2 8120 ENSG00000103723 Q13367
TMEM151A 2.62348342754108 2.00095321981198e-15 2.03273 0.00261295 TMEM151A 256472 ENSG00000179292 Q8N4L1
CDK5R2 2.65460191247078 4.69574371538245e-23 2.60906 0.00261295 CDK5R2 8941 ENSG00000171450 Q13319
SYN1 2.67200220737292 1.91997053483507e-49 2.8651 0.00261295 SYN1 6853 ENSG00000008056 P17600
SVOP 2.91817838739498 1.01007859287748e-11 3.16269 0.00685557 SVOP 55530 ENSG00000166111 Q8N4V2
L1CAM 2.97993608864311 3.84196616372589e-56 2.98956 0.00261295 L1CAM 3897 ENSG00000198910 P32004
ASPHD1 3.07618888991496 1.31511200594848e-55 3.14516 0.00261295 ASPHD1 253982 ENSG00000174939 Q5U4P2
SNAP25 3.22863967920858 1.1013032031721e-26 3.14275 0.0479574 SNAP25 6616 ENSG00000132639 P60880
CELF3 3.30100280904273 1.64380479444847e-35 3.43426 0.00261295 CELF3 11189 ENSG00000159409 Q5SZQ8
GOLGA7B 3.68336563868234 2.94062773505926e-29 3.47324 0.00261295 GOLGA7B 401647 ENSG00000155265 Q2TAP0
SCRT1 3.71945711036885 7.64478267633132e-14 4.17053 0.00261295 SCRT1 83482 ENSG00000284923;ENSG00000261678 Q9BWW7
SLITRK1 3.76167525910444 2.35413858760009e-31 3.83491 0.00261295 SLITRK1 114798 ENSG00000178235 Q96PX8
RUNDC3A 3.7659384542476 2.46198339716375e-45 3.544 0.00261295 RUNDC3A 10900 ENSG00000108309 Q59EK9
DRD2 3.79576915628844 2.02585208870753e-23 3.86382 0.00261295 DRD2 1813 ENSG00000149295 P14416
FSTL5 3.90890556160756 1.08709942039145e-22 4.01898 0.00261295 FSTL5 56884 ENSG00000168843 Q8N475
CPNE4 3.98778694893012 1.78768996891092e-20 3.69957 0.00261295 CPNE4 131034 ENSG00000196353 Q96A23
HRH3 4.03130793223104 4.41693857017719e-27 4.29277 0.00261295 HRH3 11255 ENSG00000101180 Q9Y5N1
FAM123C 4.09722042365582 1.97374179939915e-26 4.4311 0.00877391 AMER3 205147 ENSG00000178171 Q8N944
PAX5 4.32038665902449 7.74324633893092e-32 4.40834 0.00261295 PAX5 5079 ENSG00000196092 Q02548
GPR158 4.48777363453211 9.37498125333355e-31 4.47072 0.00261295 GPR158 57512 ENSG00000151025 Q5T848
LOC254559 4.56062072239959 4.59787754626672e-58 4.76844 0.00261295
UNC13A 4.64047286303013 1.52114109097086e-166 4.76434 0.00261295 UNC13A 23025 ENSG00000130477 Q9UPW8
SCG3 4.72229545959512 1.24109166993596e-139 4.66475 0.00261295 SCG3 29106 ENSG00000104112 Q8WXD2
CHGB 4.89889699154403 3.82691404277585e-90 4.95198 0.00261295 CHGB 1114 ENSG00000089199 P05060
ACTL6B 5.00879867972463 3.40009191645377e-82 5.51567 0.00261295 ACTL6B 51412 ENSG00000077080 O94805
CHGA 5.26008327616418 2.90937815165857e-176 5.29449 0.00261295 CHGA 1113 ENSG00000276781;ENSG00000100604 P10645
MIR7-3HG 5.86819723275994 7.3178712616872e-08 0.00261295 MIR7-3HG 284424 ENSG00000176840
CPLX2 6.66409188138056 9.66908120045643e-205 6.55256 0.00261295 CPLX2 10814 ENSG00000145920 Q6PUV4
Raw
cavadas-et-al-2016-suppl-table-5-augmented.tsv
gene_id ctrl_rnai_1pct_vs_21pct_edger_log2_fc ctrl_rnai_1pct_vs_21pct_edger_q ctrl_rnai_1pct_vs_21pct_cuffdiff_log2_fc ctrl_rnai_1pct_vs_21pct_cuffdiff_q rest_rnai_1pct_vs_21pct_edger_log2_fc rest_rnai_1pct_vs_21pct_edger_q rest_rnai_1pct_vs_21pct_cuffdiff_log2_fc rest_rnai_1pct_vs_21pct_cuffdiff_q rest_rnai_1pct_vs_ctrl_1pct_edger_log2_fc rest_rnai_1pct_vs_ctrl_1pct_edger_q rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_log2_fc rest_rnai_1pct_vs_ctrl_1pct_cuffdiff_q symbol_from_mygene entrez_gene ensembl_gene uniprot
ACSL6 0.693035 0.00353789 0.780700508264282 0.000726368003380255 1.40130248551486 2.03242454541503e-12 1.35732 0.000296959 0.652839 0.00368833 0.62060197725058 0.0319919632128644 ACSL6 23305 ENSG00000164398 Q9UKU0
BSN 1.11246 0.000909465 1.09928222191661 0.000218267636134508 2.63005762975093 2.17776399229072e-23 2.63468 0.000296959 1.51028 0.00368833 1.53077540783432 2.83144033842766e-08 BSN 8927 ENSG00000164061 Q9UPA5
CACNA1B 0.671965 0.00403448 0.747850614318651 0.00295938479320121 2.78808469705071 8.261889909626e-59 2.8776 0.000296959 2.1949 0.00368833 2.04023408273206 2.51782105340449e-37 CACNA1B 774 ENSG00000148408 Q00975
CDK5R2 0.906606 0.010604 0.995753258104005 0.0321245399653699 2.74718938183856 1.45755757590461e-22 2.69818 0.000296959 1.78161 0.00368833 1.75143612373456 3.84179671191274e-12 CDK5R2 8941 ENSG00000171450 Q13319
DLGAP3 0.752587 0.000909465 0.694043429172008 0.00961456742180767 2.1559802338877 2.84390708477258e-30 2.09444 0.000296959 1.3321 0.00368833 1.46193680471569 4.78385967258599e-16 DLGAP3 58512 ENSG00000116544 O95886
FBXO41 1.03105 0.000909465 0.948953354609436 5.45936686898597e-09 1.58773624377356 1.20063974195913e-26 1.6326 0.000296959 0.590333 0.00368833 0.638782889164122 0.000241335152834637 FBXO41 150726 ENSG00000163013 Q8TF61
FNDC5 0.899575 0.000909465 0.90613701680003 5.38089519592874e-05 1.72290684355273 8.80355999214918e-22 1.69674 0.000296959 0.78639 0.00368833 0.816769826752705 7.9379566771923e-06 FNDC5 252995 ENSG00000160097 Q8NAU1
FSTL4 0.673053 0.0131102 0.739232032439253 0.0323798360295508 1.90075570009152 6.09090914542728e-16 1.88138 0.000296959 1.19687 0.00368833 1.16152366765227 6.26462777571838e-07 FSTL4 23105 ENSG00000053108 Q6MZW2
GABBR2 0.640786 0.00454554 0.645720037857655 0.00311968580882013 1.40662139632651 4.2552579948505e-15 1.34725 0.000296959 0.69542 0.00368833 0.760901358468859 0.000235124454216175 GABBR2 9568 ENSG00000136928 O75899
GPR153 0.705581 0.000909465 0.667895499774045 3.10587642505649e-05 1.25420362012675 9.33697075093778e-20 1.18264 0.000296959 0.466654 0.0298078 0.586308120352704 0.000242162445668732 GPR153 387509 ENSG00000158292 Q6NV75
GPRIN1 0.478252 0.0223219 0.477797840357396 0.00055942012936162 1.23941492174865 2.81563616026256e-26 1.21924 0.000296959 0.730595 0.00368833 0.76161708139125 6.9552272353533e-10 GPRIN1 114787 ENSG00000169258 Q7Z2K8
KCNB1 1.31914 0.000909465 0.900296107746939 0.0416902129802649 2.82642513801449 7.98547669574208e-25 3.12326 0.000296959 1.79333 0.00368833 1.92612903026755 2.67522277505974e-14 KCNB1 3745 ENSG00000158445 Q14721
KCNC3 1.43523 0.000909465 1.37184499715375 1.56867683986041e-06 2.44179259904255 2.66286598814724e-22 2.43875 0.000296959 0.991693 0.00368833 1.06994760188881 9.47192248320946e-05 KCNC3 3748 ENSG00000131398 Q14003
KCNH2 0.579627 0.00865253 0.490216741279601 0.0222733494009994 1.01377112343764 5.16837815977454e-09 1.08432 0.000296959 0.494435 0.0258662 0.523554382158042 0.0420600566653047 KCNH2 3757 ENSG00000055118 Q12809
KCNK12 1.3353 0.0357746 1.46365905790182 0.0216999582758756 3.26209315769439 1.24637039402937e-16 3.3807 0.000296959 2.03502 0.00368833 1.79843409979257 1.95461754827128e-07 KCNK12 56660 ENSG00000184261 Q9HB15
MMP24 0.474043 0.0488779 0.515980335380878 0.0113258228987343 2.43529098071171 1.10012315428703e-68 2.52971 0.000296959 2.04556 0.00368833 1.91931064533083 8.88396427276933e-48 MMP24 10893 ENSG00000125966 Q9Y5R2
OGDHL 0.695533 0.000909465 0.588846066488361 7.98968538480567e-05 1.14467754175155 6.68862446368474e-19 1.20615 0.000296959 0.500505 0.0127673 0.555831475263187 0.000243130447162628 OGDHL 55753 ENSG00000197444 Q9ULD0
PCDH10 0.940026 0.000909465 0.901609889106897 4.52986056696778e-08 1.55191755554972 3.2379367220267e-24 1.5769 0.000296959 0.625683 0.00368833 0.650307666442818 0.000540457839255581 PCDH10 57575 ENSG00000138650 Q9P2E7
PHF21B 0.956119 0.000909465 0.910719969573862 2.39622031931649e-10 1.53346397317187 1.87300115125743e-32 1.62192 0.000296959 0.655629 0.00368833 0.622744003598012 9.21181520168565e-06 PHF21B 112885 ENSG00000056487 Q96EK2
SCAMP5 0.624796 0.000909465 0.641945859041357 2.54439138315763e-06 1.52220279782062 2.03430094103227e-38 1.51348 0.000296959 0.878038 0.00368833 0.880256938779264 1.32649836590514e-13 SCAMP5 192683 ENSG00000198794 Q8TAC9
SCN3B 0.872131 0.000909465 0.927797881193881 0.00214397406374503 2.21831300567436 1.02676020155295e-22 2.18769 0.000296959 1.30494 0.00368833 1.29051512448048 4.20380172297167e-09 SCN3B 55800 ENSG00000166257 Q9NY72
SLC16A9 0.499922 0.0255289 0.433670704208426 0.0186762393135241 1.14773131593342 3.69573445715738e-16 1.1156 0.000296959 0.604635 0.00368833 0.714060611724991 2.5355375624219e-06 SLC16A9 220963 ENSG00000165449 Q7RTY1
SLC2A3 1.30654 0.000909465 1.32086678327734 5.70222791328485e-19 1.77519779293355 6.54391408423013e-38 1.81367 0.000296959 0.49661 0.0101102 0.454331009656205 0.00841060353164738 SLC2A3 6515 ENSG00000059804 P11169
SLC6A17 0.817272 0.000909465 0.611180815436731 0.0161783375615908 1.27307030047687 8.44033755789584e-11 1.46602 0.000296959 0.637613 0.00368833 0.661889485040142 0.00652887050515561 SLC6A17 388662 ENSG00000197106 Q9H1V8
SYP 0.528723 0.0112456 0.545551340999049 0.00113655152744402 1.87585951597827 1.72469730513147e-44 1.888 0.000296959 1.34915 0.00368833 1.33030817497922 1.01052844781869e-23 SYP 6855 ENSG00000102003 P08247
TMEM145 0.7167 0.00296644 0.648081017622657 0.00249828900557702 1.95879859566978 6.12883200990454e-34 1.97304 0.000296959 1.24575 0.00368833 1.31071757804712 5.50409008227972e-17 TMEM145 284339 ENSG00000167619 Q8NBT3
TMEM179 1.3185 0.00824627 1.22762007534161 0.0179462735450114 2.37203698590951 2.43358822215185e-10 2.59425 0.000296959 1.26434 0.00368833 1.1444169105679 0.00684963327082222 TMEM179 388021 ENSG00000258986;ENSG00000276342 Q6ZVK1
TMEM198 0.529671 0.0225537 0.558512104940933 0.0085613648814863 1.75202339122653 1.32982963890158e-28 1.72965 0.000296959 1.18973 0.00368833 1.1935112862856 1.9325514630471e-14 TMEM198 130612 ENSG00000188760 Q66K66
VSTM2L 0.994718 0.000909465 0.894289884977136 0.0039406515857454 2.00428209277502 9.40506533784986e-17 2.06225 0.000296959 1.05788 0.00368833 1.10999220779788 1.14092422281993e-05 VSTM2L 128434 ENSG00000132821 Q96N03
Raw
requirements.txt
matplotlib==3.4.1
mygene==3.2.2
numpy==1.20.2
pandas==1.2.3
seaborn==0.11.1
sinfo==0.3.1
tqdm==4.60.0
IPython==7.22.0
jupyter_client==6.1.12
jupyter_core==4.7.1
notebook==6.3.0
xlrd==2.0.1
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