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lwaldron/tcga_gbm_IMPACT341

Last active September 1, 2020 20:58
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Quick test for download/construction time of gbm_tcga IMPACT341 panel
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tcga_gbm_IMPACT341
# docker run -it bioconductor/bioconductor_docker:latest R
BiocManager::install("cBioPortalData")
library(cBioPortalData)
cBio <- cBioPortal()
system.time(gbm <- cBioPortalData(cBio, studyId = "gbm_tcga", genePanelId = "IMPACT341"))
gbm
# again
system.time(gbm <- cBioPortalData(cBio, studyId = "gbm_tcga", genePanelId = "IMPACT341"))
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