Created
September 1, 2020 19:41
-
-
Save lwaldron/985ec24b2030b5643b0a5be7ed0b4cee to your computer and use it in GitHub Desktop.
Quick test for download/construction time of acc_tcga IMPACT341 panel
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# docker run -it bioconductor/bioconductor_docker:latest R | |
BiocManager::install("cBioPortalData") | |
library(cBioPortalData) | |
cBio <- cBioPortal() | |
system.time(acc <- cBioPortalData(cBio, studyId = "acc_tcga", genePanelId = "IMPACT341")) | |
acc |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment