Etaler_API_example.ipynb

Etaler_API_example.ipynb

Hi Martin,
I had trouble signing in CERN to use ROOT, using
my Google account. Didn't try Colab since you said it won't
work with ROOT.

         I also try in my MATE terminal (Ubuntu 18.04) using 

your suggested command but got error:

sfl@T500:~$ root --notebook

Command 'root' not found, did you mean:

command 'toot' from snap toot (0.21.0)
command 'roo' from snap roo (2.0.3)
command 'rootv' from deb xawtv
command 'rott' from deb rott
command 'proot' from deb proot

See 'snap info ' for additional versions.

sfl@T500:~$

       Anyway, I read thru your "Etaler_API_example.ipynb" and indeed

it is impressive!!! You are a brilliant programmer and I can hardly
wait for the Python Wrapper for your c++ notebook. :))

      I noticed there were some discrepancies between Etaler's

graph outputs as compared with nupic. Etaler has too many
changes from nupic that it will be difficult for you to troubleshoot what
caused the changes. You should just overlay both Etaler's and
Nupic outputs together in one graph if you can: starting from the decoder
front end, and see how it affects the final outputs.

      Thanks Martin.

Samuel

your suggested command but got error:

ROOT is not installed by default on Ubuntu based systems. Nor is it is the official repository. I installed it via Arch Linux's repo (I run Arch)

sudo pamcan -S root

You'll have to build ROOT yourself if you are on Ubuntu/Debian. @alior101, have you got a minute? I'm not sure how to build ROOT on Ubuntu/Debian.

Etaler has too many changes from nupic that it will be difficult for you to troubleshoot what caused the changes.

There are some changes I know is causing the differences.

First, Etaler implements the original TM algorithm back from 2011 and updating to the new connect-to-all method. While NuPIC uses the updated TM algorithm from 2016 (but still staying on the old connect-once method). Secondly, I didn't set the hyper parameters in Etaler to what NuPIC has. Third, NuPIC uses anomaly likelihood while Etaler uses the raw anomaly score (as I haven't implement that yet)

Hi, Since I don't know the version of gcc you're having in your linux box, I suggest you use a docker and build Etaler as well as Root inside. For me, it's the only way I managed to get it done since my Debian is way behind any modern C++ version .. Few hints: 1. Build the docker image supplied in Etaler (there is a readme inside "docker" directory" - once that's done, open a shell inside that image and clone Etaler. You will be able to compile Etaler inside since all dependencies and gcc versions are the correct ones... 2. Still inside that Etaler container: 2.1 install python2.7 and python2.7-dev using apt 2.2 download cern Root source files (I used the latest root-6.18.00 version https://root.cern/download/root_v6.18.00.Linux-ubuntu18-x86_64-gcc7.4.tar.gz ) - compile it using the recommended way. Pay attention to enable C++17 cmake -Dcxx17=ON -DPYTHON_EXECUTABLE=/usr/bin/python2.7 .. 2.3 once compilation done, there is a script inside root for correct environment variables - for example in my docker container: root@10442ee48dbb:/workspaces# cd root-6.18.00/ root@10442ee48dbb:/workspaces/root-6.18.00# source ./build/bin/thisroot.sh manpath: can't set the locale; make sure $LC_* and $LANG are correct root@10442ee48dbb:/workspaces/root-6.18.00# now you can run root by just typing root While being able to run root and enjoying the C++ REPL framework that Martin uses, I still wasn't able to run root with --notepad inside docker.. When I will succeed I will update my fork and PR Martin ... Lior

…

On Mon, Aug 5, 2019 at 4:27 AM Martin Chang ***@***.***> wrote: your suggested command but got error: ROOT is not installed by default on Ubuntu based systems. Nor is it is the official repository. I installed it via Arch Linux's repo (I run Arch) sudo pamcan -S root You'll have to build ROOT yourself if you are on Ubuntu/Debian. @alior101 <https://github.com/alior101>, have you got a minute? I'm not sure how to build ROOT on UbuntuDebian. — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <https://gist.github.com/e7f5eacb17a1c328cf0f4ae2ed9ea648?email_source=notifications&email_token=AAXET3EPOPVMAQHZOZJ7OMLQC56ZTA5CNFSM4IJETRZ2YY3PNVWWK3TUL52HS4DFVNDWS43UINXW23LFNZ2KUY3PNVWWK3TUL5UWJTQAFWPLQ#gistcomment-2989752>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AAXET3FQTDUJQZMSMSXW36LQC56ZTANCNFSM4IJETRZQ> .

Hi Lior,            Thank you Lior for your detailed note on how to run ROOT inside DOCKER.  Gosh, after all these, there's still a chance of not able to run ETALER's latest notebook!  I will just wait for the PYTHON wrapper then.            @martin, I don't need to have ETALER to produce exactly the same result, as long as it can detect anamorly, that will be useful.  When you got a moment: have a look at EOGMANEO or OGMANEO2 in Github.  That a C++ online learning which could rival to HTM.CORE and ETALER.Samuel rom my Samsung Galaxy smartphone. -------- Original message --------From: Lior Assouline <[email protected]> Date: 2019-08-04 11:38 p.m. (GMT-08:00) To: marty1885 <[email protected]> Cc: cyberslam <[email protected]>, Comment <[email protected]> Subject: Re: marty1885/Etaler_API_example.ipynb Hi, Since I don't know the version of gcc you're having in your linux box, I suggest you use a docker and build Etaler as well as Root inside. For me, it's the only way I managed to get it done since my Debian is way behind any modern C++ version .. Few hints: 1. Build the docker image supplied in Etaler (there is a readme inside "docker" directory" - once that's done, open a shell inside that image and clone Etaler. You will be able to compile Etaler inside since all dependencies and gcc versions are the correct ones... 2. Still inside that Etaler container: 2.1 install python2.7 and python2.7-dev using apt 2.2 download cern Root source files (I used the latest root-6.18.00 version https://root.cern/download/root_v6.18.00.Linux-ubuntu18-x86_64-gcc7.4.tar.gz ) - compile it using the recommended way. Pay attention to enable C++17 cmake -Dcxx17=ON -DPYTHON_EXECUTABLE=/usr/bin/python2.7 .. 2.3 once compilation done, there is a script inside root for correct environment variables - for example in my docker container: root@10442ee48dbb:/workspaces# cd root-6.18.00/ root@10442ee48dbb:/workspaces/root-6.18.00# source ./build/bin/thisroot.sh manpath: can't set the locale; make sure $LC_* and $LANG are correct root@10442ee48dbb:/workspaces/root-6.18.00# now you can run root by just typing root While being able to run root and enjoying the C++ REPL framework that Martin uses, I still wasn't able to run root with --notepad inside docker.. When I will succeed I will update my fork and PR Martin ... Lior

On Mon, Aug 5, 2019 at 4:27 AM Martin Chang ***@***.***> wrote: your suggested command but got error: ROOT is not installed by default on Ubuntu based systems. Nor is it is the official repository. I installed it via Arch Linux's repo (I run Arch) sudo pamcan -S root You'll have to build ROOT yourself if you are on Ubuntu/Debian. @alior101 <https://github.com/alior101>, have you got a minute? I'm not sure how to build ROOT on UbuntuDebian. — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <https://gist.github.com/e7f5eacb17a1c328cf0f4ae2ed9ea648?email_source=notifications&email_token=AAXET3EPOPVMAQHZOZJ7OMLQC56ZTA5CNFSM4IJETRZ2YY3PNVWWK3TUL52HS4DFVNDWS43UINXW23LFNZ2KUY3PNVWWK3TUL5UWJTQAFWPLQ#gistcomment-2989752>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AAXET3FQTDUJQZMSMSXW36LQC56ZTANCNFSM4IJETRZQ> .

—You are receiving this because you commented.Reply to this email directly, view it on GitHub, or mute the thread. [ { "@context": "http://schema.org", "@type": "EmailMessage", "potentialAction": { "@type": "ViewAction", "target": "https://gist.github.com/e7f5eacb17a1c328cf0f4ae2ed9ea648?email_source=notifications\u0026email_token=ACGVJNSE5RTP2FJWE4IEDVDQC7DF3A5CNFSM4IJETRZ2YY3PNVWWK3TUL52HS4DFVNDWS43UINXW23LFNZ2KUY3PNVWWK3TUL5UWJTQAFWPUA#gistcomment-2989888", "url": "https://gist.github.com/e7f5eacb17a1c328cf0f4ae2ed9ea648?email_source=notifications\u0026email_token=ACGVJNSE5RTP2FJWE4IEDVDQC7DF3A5CNFSM4IJETRZ2YY3PNVWWK3TUL52HS4DFVNDWS43UINXW23LFNZ2KUY3PNVWWK3TUL5UWJTQAFWPUA#gistcomment-2989888", "name": "View Gist" }, "description": "View this Gist on GitHub", "publisher": { "@type": "Organization", "name": "GitHub", "url": "https://github.com" } } ]

@cyberslam You might want to check your email settings and edit your post. The format os way off and other data is leaking trough.

Hi Martin,             Thanks for the alert: I was using my Samsung/ Android phone and didn't realize that cc on "comment" may have included all past emails.             Anyway, I am still waiting for your Python Wrapper for the ETALER notebook someday.               Keep up the good work Martin.  With your talent - there are many future revenues opened to you once you graduate.  I am an old time engineer and doing programming as side business because I couldn't at my younger days!   ;)SamuelSent from my Samsung Galaxy smartphone. -------- Original message --------From: Martin Chang <[email protected]> Date: 2019-08-05 9:25 a.m. (GMT-08:00) To: marty1885 <[email protected]> Cc: cyberslam <[email protected]>, Comment <[email protected]> Subject: Re: marty1885/Etaler_API_example.ipynb @cyberaam You might want to check your email settings and edit your post. The format os way off and other data is leaking trough. —You are receiving this because you commented.Reply to this email directly, view it on GitHub, or mute the thread. [ { "@context": "http://schema.org", "@type": "EmailMessage", "potentialAction": { "@type": "ViewAction", "target": "https://gist.github.com/e7f5eacb17a1c328cf0f4ae2ed9ea648?email_source=notifications\u0026email_token=ACGVJNV33IVDDUMGRZAH6PTQDBH7XA5CNFSM4IJETRZ2YY3PNVWWK3TUL52HS4DFVNDWS43UINXW23LFNZ2KUY3PNVWWK3TUL5UWJTQAFWQS6#gistcomment-2990383", "url": "https://gist.github.com/e7f5eacb17a1c328cf0f4ae2ed9ea648?email_source=notifications\u0026email_token=ACGVJNV33IVDDUMGRZAH6PTQDBH7XA5CNFSM4IJETRZ2YY3PNVWWK3TUL52HS4DFVNDWS43UINXW23LFNZ2KUY3PNVWWK3TUL5UWJTQAFWQS6#gistcomment-2990383", "name": "View Gist" }, "description": "View this Gist on GitHub", "publisher": { "@type": "Organization", "name": "GitHub", "url": "https://github.com" } } ]