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Remove output from IPython notebook from the command line (dev version 1.0)
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""" | |
Usage: python remove_output.py notebook.ipynb | |
Modified from remove_output by Minrk | |
Modified from remove_output by mathematicalmichael | |
""" | |
import sys | |
import io | |
import os | |
from nbformat import read, write, NO_CONVERT | |
def remove_outputs(nb): | |
"""remove the outputs from a notebook""" | |
cell_rm = [] | |
for cell in nb.cells: | |
cell.outputs = [] | |
nb.metadata.history = [] | |
if __name__ == '__main__': | |
fname = sys.argv[1] | |
with io.open(fname, 'r') as f: | |
nb = read(f, NO_CONVERT) | |
remove_outputs(nb) | |
base, ext = os.path.splitext(fname) | |
new_ipynb = "%s_removed%s" % (base, ext) | |
with io.open(new_ipynb, 'w', encoding='utf8') as f: | |
write(nb, f, NO_CONVERT) | |
print("wrote %s"% new_ipynb) |
@emskiphoto seems like the problem is you've got some unhandled character. this snippet seems to work in general but yeah, in no way does it have robust error-handling =/
sorry it didn't work for you, but it sounds like you did the equivalent thing manually. automation like this is really only useful when the problem is persistent. I for one, haven't used it since publication because the underlying problem bloating my notebooks was fixed.
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THanks for sharing this solution. Unfortunately it did not work for me, here is the error:
UnicodeDecodeError: 'charmap' codec can't decode byte 0x8f in position 467852: character maps to
I was able to recover my 75 MB .ipynb file though. I made the mistake of printing a gigantic list to the notebook output. I was able to open the .ipynb file with a simple text editor and delete the gigantic list output and this dropped the file size to 3 MB. Now it works.