axondeepseg_export_objectwise_metrics

# Make sure to install openpyxl and pandas first using "pip install ..."
import openpyxl
import pandas as pd

x = np.array([], dtype=[
                        ('x0', 'f4'),
                        ('y0', 'f4'),
                        ('gratio','f4'),
                        ('axon_area','f4'),
                        ('myelin_area','f4'),
                        ('axon_diam','f4'),
                        ('myelin_thickness','f4'),
                        ('axonmyelin_area','f4'),
                        ('solidity','f4'),
                        ('eccentricity','f4'),
                        ('orientation','f4')
                       ]
            )

# Compute statistics
stats_array = get_axon_morphometrics(pred_axon,path_folder,pred_myelin)
for stats in stats_array:
    x = np.append(x,
        np.array(
            [(
            stats['x0'],
            stats['y0'],
            stats['gratio'],
            stats['axon_area'],
            stats['myelin_area'],
            stats['axon_diam'],
            stats['myelin_thickness'],
            stats['axonmyelin_area'],
            stats['solidity'],
            stats['eccentricity'],
            stats['orientation']
            )],
            dtype=x.dtype)
        )
    
# Export to excel & csv file 
pd.DataFrame(x).to_excel("stats_samples.xlsx")
pd.DataFrame(x).to_csv("stats_samples.csv")