matthewfeickert · March 20, 2023 19:17
diff --git a/README.md b/README.md
diff --git a/bootstrap.sh b/bootstrap.sh
 #!/bin/bash

 # Run in a subshell as to not pollute the original environment
 export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase
 . "${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh" -3  # setupATLAS

 lsetup 'panda'
 . cvmfs-venv romain-example
 # Need this to avoid rucio breaking pip later
 # The PYTHONPATH is polluted with Python 3.6, so get the last pip release
 # that was compatible with Python 3.6 (https://pypi.org/project/pip/21.3.1/)
 python -m pip install --upgrade 'pip<22.0'
 python -m pip show pip
diff --git a/example.sh b/example.sh
 #!/bin/bash

 # Install cvmfs-venv
 mkdir -p ~/.local/bin
 export PATH=~/.local/bin:"${PATH}"  # If ~/.local/bin not on PATH already
 curl -sL https://raw.githubusercontent.com/matthewfeickert/cvmfs-venv/main/cvmfs-venv.sh -o ~/.local/bin/cvmfs-venv
 chmod +x ~/.local/bin/cvmfs-venv

 # Bootstrap a working environment first time
 if [ ! -d "romain-example" ]; then
    if [ -f "bootstrap.sh" ]; then
        # Run in a subshell as to not pollute the current environment
        bash bootstrap.sh
    fi
 fi

 # Setup the real environment now
 setupATLAS
 lsetup 'rucio' 'panda' 'pyami' 'xrootd'
 . romain-example/bin/activate
 # Needed to avoid bug with rucio and polluted PYTHONPATH
 # The PYTHONPATH is polluted with Python 3.6, so get the last pandas release
 # that was compatible with Python 3.6 (https://pypi.org/project/pandas/1.1.5/)
 python -m pip --quiet install --upgrade uproot 'pandas<1.2.0'

 python --version --version
 echo "PYTHONPATH=${PYTHONPATH}"
 echo "# python -m pip list"
 python -m pip list
 echo "# python -m pip list --local"
 python -m pip list --local

 echo "command -v rucio: $(command -v rucio)"
 echo "command -v xrootd: $(command -v xrootd)"
 echo "command -v prun: $(command -v prun)"
 echo "command -v ami: $(command -v ami)"
 python import_example.py
diff --git a/import_example.py b/import_example.py
 import rucio
 import pyAMI
 import XRootD
 import pandaclient
 import uproot
 import pandas

 print(rucio)
 print(pyAMI)
 print(XRootD)
 print(pandaclient)
 print(uproot)
 print(pandas)
	#!/bin/bash

	# Run in a subshell as to not pollute the original environment
	export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase
	. "${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh" -3 # setupATLAS

	lsetup 'panda'
	. cvmfs-venv romain-example
	# Need this to avoid rucio breaking pip later
	# The PYTHONPATH is polluted with Python 3.6, so get the last pip release
	# that was compatible with Python 3.6 (https://pypi.org/project/pip/21.3.1/)
	python -m pip install --upgrade 'pip<22.0'
	python -m pip show pip
	#!/bin/bash

	# Install cvmfs-venv
	mkdir -p ~/.local/bin
	export PATH=~/.local/bin:"${PATH}" # If ~/.local/bin not on PATH already
	curl -sL https://raw.githubusercontent.com/matthewfeickert/cvmfs-venv/main/cvmfs-venv.sh -o ~/.local/bin/cvmfs-venv
	chmod +x ~/.local/bin/cvmfs-venv

	# Bootstrap a working environment first time
	if [ ! -d "romain-example" ]; then
	if [ -f "bootstrap.sh" ]; then
	# Run in a subshell as to not pollute the current environment
	bash bootstrap.sh
	fi
	fi

	# Setup the real environment now
	setupATLAS
	lsetup 'rucio' 'panda' 'pyami' 'xrootd'
	. romain-example/bin/activate
	# Needed to avoid bug with rucio and polluted PYTHONPATH
	# The PYTHONPATH is polluted with Python 3.6, so get the last pandas release
	# that was compatible with Python 3.6 (https://pypi.org/project/pandas/1.1.5/)
	python -m pip --quiet install --upgrade uproot 'pandas<1.2.0'

	python --version --version
	echo "PYTHONPATH=${PYTHONPATH}"
	echo "# python -m pip list"
	python -m pip list
	echo "# python -m pip list --local"
	python -m pip list --local

	echo "command -v rucio: $(command -v rucio)"
	echo "command -v xrootd: $(command -v xrootd)"
	echo "command -v prun: $(command -v prun)"
	echo "command -v ami: $(command -v ami)"
	python import_example.py
	import rucio
	import pyAMI
	import XRootD
	import pandaclient
	import uproot
	import pandas

	print(rucio)
	print(pyAMI)
	print(XRootD)
	print(pandaclient)
	print(uproot)
	print(pandas)