mdshw5 · March 25, 2016 13:45
diff --git a/answer.sh b/answer.sh
 pip install pyfaidx
 faidx --transform nucleotide giant.fasta > base_counts.txt
 cat base_counts.txt | awk '{if ($8 == 0); print $1}' > seqs_without_n.txt
 xargs faidx giant.fasta < seqs_without_n.txt
	pip install pyfaidx
	faidx --transform nucleotide giant.fasta > base_counts.txt
	cat base_counts.txt \| awk '{if ($8 == 0); print $1}' > seqs_without_n.txt
	xargs faidx giant.fasta < seqs_without_n.txt