Results from Fisher's exact test.

gistfile1.r

R » FTgse7305                                                                                                                                                                                 

        Fisher's Exact Test for Count Data

data:  gse7305Contingency
p-value = 0.09592
alternative hypothesis: two.sided

R » FTgse7307                                                                                                                                                                                 

        Fisher's Exact Test for Count Data

data:  gse7307Contingency
p-value = 0.008642
alternative hypothesis: two.sided

R » FTgse6364

        Fisher's Exact Test for Count Data

data:  gse6364Contingency
p-value = 0.000466
alternative hypothesis: two.sided

R » FTgse7305sigOnly

        Fisher's Exact Test for Count Data

data:  gse7305Contingency
p-value = 0.05741
alternative hypothesis: true odds ratio is not equal to 1
95 percent confidence interval:
   0.7027 451.1905
sample estimates:
odds ratio 
     8.265 

R » FTgse7307sigOnly                                                                                                                                                                          

        Fisher's Exact Test for Count Data

data:  gse7307Contingency
p-value = 0.1667
alternative hypothesis: true odds ratio is not equal to 1
95 percent confidence interval:
 0.1282    Inf
sample estimates:
odds ratio 
       Inf 

R » FTgse6364sigOnly                                                                                                                                                                          

        Fisher's Exact Test for Count Data

data:  gse6364Contingency
p-value = 0.01515
alternative hypothesis: true odds ratio is not equal to 1
95 percent confidence interval:
 0.0000 0.7385
sample estimates:
odds ratio 
         0 

R » FTgse7305NoSrc

        Fisher's Exact Test for Count Data

data:  gse7305Contingency
p-value = 0.02749
alternative hypothesis: two.sided

R » FTgse7307NoSrc                                                                                                                                                                            

        Fisher's Exact Test for Count Data

data:  gse7307Contingency
p-value = 0.01928
alternative hypothesis: two.sided

R » FTgse6364NoSrc

        Fisher's Exact Test for Count Data

data:  gse6364Contingency
p-value = 0.0001586
alternative hypothesis: two.sided

R » FTgse7305NoSrcSigOnly

        Fisher's Exact Test for Count Data

data:  gse7305Contingency
p-value = 0.01699
alternative hypothesis: true odds ratio is not equal to 1
95 percent confidence interval:
 1.177   Inf
sample estimates:
odds ratio 
       Inf 

R » FTgse7307NoSrcSigOnly                                                                                                                                                                     

        Fisher's Exact Test for Count Data

data:  gse7307Contingency
p-value = 0.1667
alternative hypothesis: true odds ratio is not equal to 1
95 percent confidence interval:
 0.1282    Inf
sample estimates:
odds ratio 
       Inf 

R » FTgse6364NoSrcSigOnly                                                                                                                                                                     

        Fisher's Exact Test for Count Data

data:  gse6364Contingency
p-value = 0.01515
alternative hypothesis: true odds ratio is not equal to 1
95 percent confidence interval:
 0.0000 0.7385
sample estimates:
odds ratio 
         0