Skip to content

Instantly share code, notes, and snippets.

@mfansler
Created October 27, 2020 17:35
Show Gist options
  • Save mfansler/3ce26420603adfa02348882db78618e3 to your computer and use it in GitHub Desktop.
Save mfansler/3ce26420603adfa02348882db78618e3 to your computer and use it in GitHub Desktop.
Conda environment YAML for SO issue with shared libs
name: foo
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _r-mutex=1.0.1=anacondar_1
- binutils_impl_linux-64=2.35=h18a2f87_9
- binutils_linux-64=2.35=hc3fd857_29
- bioconductor-biocgenerics=0.32.0=r36_0
- bioconductor-biocparallel=1.20.0=r36he1b5a44_0
- bioconductor-delayedarray=0.12.0=r36h516909a_0
- bioconductor-delayedmatrixstats=1.8.0=r36_0
- bioconductor-hdf5array=1.14.0=r36h516909a_0
- bioconductor-iranges=2.20.0=r36h516909a_0
- bioconductor-rhdf5=2.30.0=r36he1b5a44_0
- bioconductor-rhdf5lib=1.8.0=r36h516909a_0
- bioconductor-s4vectors=0.24.0=r36h516909a_0
- bwidget=1.9.14=0
- bzip2=1.0.8=h516909a_3
- c-ares=1.16.1=h516909a_3
- ca-certificates=2020.6.20=hecda079_0
- cairo=1.16.0=h488836b_1006
- curl=7.71.1=he644dc0_8
- fontconfig=2.13.1=h1056068_1002
- freetype=2.10.4=he06d7ca_0
- fribidi=1.0.10=h516909a_0
- gcc_impl_linux-64=9.3.0=h28f5a38_17
- gcc_linux-64=9.3.0=h7247604_29
- gettext=0.19.8.1=hf34092f_1004
- gfortran_impl_linux-64=9.3.0=h2bb4189_17
- gfortran_linux-64=9.3.0=ha1c937c_29
- graphite2=1.3.13=he1b5a44_1001
- gsl=2.6=h294904e_0
- gxx_impl_linux-64=9.3.0=h53cdd4c_17
- gxx_linux-64=9.3.0=h0d07fa4_29
- harfbuzz=2.7.2=hb1ce69c_1
- icu=67.1=he1b5a44_0
- jpeg=9d=h516909a_0
- kernel-headers_linux-64=2.6.32=h77966d4_13
- krb5=1.17.1=hfafb76e_3
- ld_impl_linux-64=2.35=h769bd43_9
- libblas=3.9.0=2_openblas
- libcblas=3.9.0=2_openblas
- libcurl=7.71.1=hcdd3856_8
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.2.1=he1b5a44_1007
- libgcc-devel_linux-64=9.3.0=hfd08b2a_17
- libgcc-ng=9.3.0=h5dbcf3e_17
- libgfortran-ng=9.3.0=he4bcb1c_17
- libgfortran5=9.3.0=he4bcb1c_17
- libglib=2.66.2=h0dae87d_0
- libgomp=9.3.0=h5dbcf3e_17
- libiconv=1.16=h516909a_0
- liblapack=3.9.0=2_openblas
- libnghttp2=1.41.0=h8cfc5f6_2
- libopenblas=0.3.12=pthreads_h4812303_1
- libpng=1.6.37=hed695b0_2
- libssh2=1.9.0=hab1572f_5
- libstdcxx-devel_linux-64=9.3.0=h4084dd6_17
- libstdcxx-ng=9.3.0=h2ae2ef3_17
- libtiff=4.1.0=hc7e4089_6
- libuuid=2.32.1=h14c3975_1000
- libwebp-base=1.1.0=h516909a_3
- libxcb=1.13=h14c3975_1002
- libxml2=2.9.10=h68273f3_2
- lz4-c=1.9.2=he1b5a44_3
- make=4.3=hd18ef5c_1
- ncurses=6.2=he1b5a44_2
- openssl=1.1.1h=h516909a_0
- pango=1.42.4=h80147aa_5
- pcre=8.44=he1b5a44_0
- pixman=0.38.0=h516909a_1003
- pthread-stubs=0.4=h14c3975_1001
- r-base=3.6.3=hc603457_4
- r-bh=1.72.0_3=r36h6115d3f_1
- r-formatr=1.7=r36h6115d3f_2
- r-futile.logger=1.4.3=r36h6115d3f_1003
- r-futile.options=1.0.1=r36h6115d3f_1002
- r-lambda.r=1.2.4=r36h6115d3f_1
- r-lattice=0.20_41=r36hcdcec82_2
- r-matrix=1.2_18=r36h7fa42b6_3
- r-matrixstats=0.57.0=r36hcdcec82_0
- r-snow=0.4_3=r36h6115d3f_1002
- readline=8.0=he28a2e2_2
- sed=4.8=hbfbb72e_0
- sysroot_linux-64=2.12=h77966d4_13
- tk=8.6.10=hed695b0_1
- tktable=2.10=h555a92e_3
- xorg-kbproto=1.0.7=h14c3975_1002
- xorg-libice=1.0.10=h516909a_0
- xorg-libsm=1.2.3=h84519dc_1000
- xorg-libx11=1.6.12=h516909a_0
- xorg-libxau=1.0.9=h14c3975_0
- xorg-libxdmcp=1.1.3=h516909a_0
- xorg-libxext=1.3.4=h516909a_0
- xorg-libxrender=0.9.10=h516909a_1002
- xorg-renderproto=0.11.1=h14c3975_1002
- xorg-xextproto=7.3.0=h14c3975_1002
- xorg-xproto=7.0.31=h14c3975_1007
- xz=5.2.5=h516909a_1
- zlib=1.2.11=h516909a_1010
- zstd=1.4.5=h6597ccf_2
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment