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Seurat install on OSX-64
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| name: so-seurat | |
| channels: | |
| - conda-forge | |
| - bioconda | |
| - defaults | |
| dependencies: | |
| - _r-mutex=1.0.1=anacondar_1 | |
| - bwidget=1.9.14=0 | |
| - bzip2=1.0.8=haf1e3a3_3 | |
| - c-ares=1.16.1=haf1e3a3_3 | |
| - ca-certificates=2020.6.20=hecda079_0 | |
| - cairo=1.16.0=ha8983da_1005 | |
| - cctools_osx-64=949.0.1=h5ba7a2e_7 | |
| - certifi=2020.6.20=py38h32f6830_0 | |
| - clang=10.0.1=default_hf57f61e_1 | |
| - clang_osx-64=10.0.1=h05bbb7f_10 | |
| - clangxx=10.0.1=default_hf57f61e_1 | |
| - clangxx_osx-64=10.0.1=h05bbb7f_10 | |
| - colormath=3.0.0=py_2 | |
| - compiler-rt=10.0.1=he6db49b_0 | |
| - compiler-rt_osx-64=10.0.1=h033240e_0 | |
| - curl=7.71.1=hcb81553_6 | |
| - decorator=4.4.2=py_0 | |
| - fontconfig=2.13.1=h79c0d67_1002 | |
| - freetype=2.10.2=h8da9a1a_0 | |
| - fribidi=1.0.10=h0b31af3_0 | |
| - gettext=0.19.8.1=h46ab8bc_1002 | |
| - gfortran_impl_osx-64=7.5.0=hae4d780_6 | |
| - gfortran_osx-64=7.5.0=h044cb63_8 | |
| - glib=2.66.0=hdb5fb44_0 | |
| - gmp=6.2.0=hb1e8313_2 | |
| - graphite2=1.3.13=h12caacf_1001 | |
| - gsl=2.6=ha2d443c_0 | |
| - harfbuzz=2.7.2=h8810732_0 | |
| - icu=67.1=hb1e8313_0 | |
| - isl=0.22.1=h3a6d616_1 | |
| - joblib=0.16.0=py_0 | |
| - jpeg=9d=h0b31af3_0 | |
| - krb5=1.17.1=h75d18d8_3 | |
| - ld64_osx-64=530=h3c32e8a_7 | |
| - libblas=3.8.0=17_openblas | |
| - libcblas=3.8.0=17_openblas | |
| - libclang-cpp10=10.0.1=default_hf57f61e_1 | |
| - libcurl=7.71.1=h9bf37e3_6 | |
| - libcxx=10.0.1=h5f48129_0 | |
| - libedit=3.1.20191231=h0678c8f_2 | |
| - libev=4.33=haf1e3a3_1 | |
| - libffi=3.2.1=hb1e8313_1007 | |
| - libgfortran=4.0.0=3 | |
| - libgfortran4=7.5.0=h1565451_3 | |
| - libiconv=1.16=haf1e3a3_0 | |
| - liblapack=3.8.0=17_openblas | |
| - libllvm10=10.0.1=h009f743_3 | |
| - libnghttp2=1.41.0=h7580e61_2 | |
| - libopenblas=0.3.10=openmp_h63d9170_4 | |
| - libpng=1.6.37=hb0a8c7a_2 | |
| - libssh2=1.9.0=h8a08a2b_5 | |
| - libtiff=4.1.0=h2ae36a8_6 | |
| - libwebp-base=1.1.0=h0b31af3_3 | |
| - libxml2=2.9.10=h2c6e4a5_2 | |
| - llvm-openmp=10.0.1=h28b9765_0 | |
| - llvm-tools=10.0.1=h1341992_3 | |
| - llvmlite=0.34.0=py38h3707e27_1 | |
| - lz4-c=1.9.2=hb1e8313_3 | |
| - make=4.3=h0b31af3_0 | |
| - mpc=1.1.0=ha57cd0f_1009 | |
| - mpfr=4.0.2=h72d8aaf_1 | |
| - ncurses=6.2=hb1e8313_1 | |
| - networkx=2.5=py_0 | |
| - numba=0.51.2=py38h6be0db6_0 | |
| - numpy=1.19.1=py38h8ccc501_2 | |
| - openssl=1.1.1g=haf1e3a3_1 | |
| - pango=1.42.4=haa940fe_4 | |
| - pcre=8.44=h4a8c4bd_0 | |
| - pcre2=10.35=h977ceac_0 | |
| - pip=20.2.3=py_0 | |
| - pixman=0.38.0=h01d97ff_1003 | |
| - python=3.8.5=h0ed32c4_8_cpython | |
| - python_abi=3.8=1_cp38 | |
| - r-abind=1.4_5=r40h6115d3f_1003 | |
| - r-askpass=1.1=r40h17f1fa6_2 | |
| - r-assertthat=0.2.1=r40h6115d3f_2 | |
| - r-backports=1.1.10=r40h800e0f2_0 | |
| - r-base=4.0.2=hc30ca75_1 | |
| - r-base64enc=0.1_3=r40h17f1fa6_1004 | |
| - r-bh=1.72.0_3=r40h6115d3f_1 | |
| - r-bitops=1.0_6=r40h17f1fa6_1004 | |
| - r-callr=3.4.4=r40h6115d3f_0 | |
| - r-catools=1.18.0=r40hc5da6b9_1 | |
| - r-cli=2.0.2=r40h6115d3f_1 | |
| - r-cluster=2.1.0=r40h384270c_3 | |
| - r-codetools=0.2_16=r40h6115d3f_1002 | |
| - r-colorspace=1.4_1=r40h17f1fa6_2 | |
| - r-commonmark=1.7=r40h17f1fa6_1002 | |
| - r-cowplot=1.1.0=r40h6115d3f_0 | |
| - r-crayon=1.3.4=r40h6115d3f_1003 | |
| - r-crosstalk=1.1.0.1=r40h6115d3f_1 | |
| - r-curl=4.3=r40h17f1fa6_1 | |
| - r-data.table=1.12.8=r40h17f1fa6_1 | |
| - r-deldir=0.1_29=r40h00bb25b_0 | |
| - r-desc=1.2.0=r40h6115d3f_1003 | |
| - r-digest=0.6.25=r40hc5da6b9_2 | |
| - r-dplyr=1.0.2=r40h710217c_0 | |
| - r-dqrng=0.2.1=r40hc5da6b9_2 | |
| - r-ellipsis=0.3.1=r40h17f1fa6_0 | |
| - r-evaluate=0.14=r40h6115d3f_2 | |
| - r-fansi=0.4.1=r40h17f1fa6_1 | |
| - r-farver=2.0.3=r40hc5da6b9_1 | |
| - r-fastmap=1.0.1=r40hc5da6b9_1 | |
| - r-fitdistrplus=1.1_1=r40h6115d3f_0 | |
| - r-fnn=1.1.3=r40hc5da6b9_2 | |
| - r-future=1.18.0=r40h6115d3f_0 | |
| - r-future.apply=1.6.0=r40h6115d3f_0 | |
| - r-gdata=2.18.0=r40h6115d3f_1003 | |
| - r-generics=0.0.2=r40h6115d3f_1003 | |
| - r-ggplot2=3.3.2=r40h6115d3f_0 | |
| - r-ggrepel=0.8.2=r40hc5da6b9_1 | |
| - r-ggridges=0.5.2=r40h6115d3f_2 | |
| - r-globals=0.13.0=r40h6115d3f_0 | |
| - r-glue=1.4.2=r40h800e0f2_0 | |
| - r-goftest=1.2_2=r40h17f1fa6_1 | |
| - r-gplots=3.1.0=r40h6115d3f_0 | |
| - r-gridextra=2.3=r40h6115d3f_1003 | |
| - r-gtable=0.3.0=r40h6115d3f_3 | |
| - r-gtools=3.8.2=r40h17f1fa6_1 | |
| - r-hexbin=1.28.1=r40h384270c_1 | |
| - r-htmltools=0.5.0=r40hc5da6b9_0 | |
| - r-htmlwidgets=1.5.1=r40h6115d3f_1 | |
| - r-httpuv=1.5.4=r40hc5da6b9_0 | |
| - r-httr=1.4.2=r40h6115d3f_0 | |
| - r-ica=1.0_2=r40h6115d3f_2 | |
| - r-igraph=1.2.5=r40h28033da_1 | |
| - r-irlba=2.3.3=r40h26f5615_3 | |
| - r-isoband=0.2.2=r40hc5da6b9_0 | |
| - r-jsonlite=1.7.1=r40h800e0f2_0 | |
| - r-kernsmooth=2.23_17=r40h3830744_1 | |
| - r-labeling=0.3=r40h6115d3f_1003 | |
| - r-later=1.1.0.1=r40hc5da6b9_0 | |
| - r-lattice=0.20_41=r40h17f1fa6_2 | |
| - r-lazyeval=0.2.2=r40h17f1fa6_2 | |
| - r-leiden=0.3.3=r40h6115d3f_1 | |
| - r-lifecycle=0.2.0=r40h6115d3f_1 | |
| - r-listenv=0.8.0=r40h6115d3f_1 | |
| - r-lmtest=0.9_38=r40h00bb25b_0 | |
| - r-lsei=1.3_0=r40hf080539_0 | |
| - r-magrittr=1.5=r40h6115d3f_1003 | |
| - r-mass=7.3_53=r40h800e0f2_0 | |
| - r-matrix=1.2_18=r40h26f5615_3 | |
| - r-matrixstats=0.56.0=r40h17f1fa6_1 | |
| - r-mgcv=1.8_33=r40hb6d66fe_0 | |
| - r-mime=0.9=r40h17f1fa6_1 | |
| - r-miniui=0.1.1.1=r40h6115d3f_1002 | |
| - r-munsell=0.5.0=r40h6115d3f_1003 | |
| - r-nlme=3.1_149=r40hbce4cb8_0 | |
| - r-npsurv=0.4_0.1=r40h6115d3f_0 | |
| - r-openssl=1.4.3=r40ha713f70_0 | |
| - r-patchwork=1.0.1=r40h6115d3f_0 | |
| - r-pbapply=1.4_3=r40h6115d3f_0 | |
| - r-pillar=1.4.6=r40h6115d3f_0 | |
| - r-pkgbuild=1.1.0=r40h6115d3f_0 | |
| - r-pkgconfig=2.0.3=r40h6115d3f_1 | |
| - r-pkgload=1.1.0=r40hc5da6b9_0 | |
| - r-plotly=4.9.2.1=r40h6115d3f_1 | |
| - r-plyr=1.8.6=r40hc5da6b9_1 | |
| - r-png=0.1_7=r40h17f1fa6_1004 | |
| - r-polyclip=1.10_0=r40hc5da6b9_2 | |
| - r-praise=1.0.0=r40h6115d3f_1004 | |
| - r-prettyunits=1.1.1=r40h6115d3f_1 | |
| - r-processx=3.4.4=r40h800e0f2_0 | |
| - r-promises=1.1.1=r40hc5da6b9_0 | |
| - r-ps=1.3.4=r40h800e0f2_0 | |
| - r-purrr=0.3.4=r40h17f1fa6_1 | |
| - r-r6=2.4.1=r40h6115d3f_1 | |
| - r-rann=2.6.1=r40hc5da6b9_2 | |
| - r-rappdirs=0.3.1=r40h17f1fa6_1004 | |
| - r-rcolorbrewer=1.1_2=r40h6115d3f_1003 | |
| - r-rcpp=1.0.5=r40hc5da6b9_0 | |
| - r-rcppannoy=0.0.16=r40hc5da6b9_1 | |
| - r-rcppeigen=0.3.3.7.0=r40hdab79a9_2 | |
| - r-rcppparallel=5.0.2=r40hc5da6b9_0 | |
| - r-rcppprogress=0.4.2=r40h6115d3f_1 | |
| - r-reshape2=1.4.4=r40hc5da6b9_1 | |
| - r-reticulate=1.16=r40hc5da6b9_0 | |
| - r-rlang=0.4.7=r40h17f1fa6_0 | |
| - r-rocr=1.0_11=r40h6115d3f_1 | |
| - r-rpart=4.1_15=r40h17f1fa6_2 | |
| - r-rprojroot=1.3_2=r40h6115d3f_1003 | |
| - r-rspectra=0.16_0=r40hdab79a9_3 | |
| - r-rstudioapi=0.11=r40h6115d3f_1 | |
| - r-rsvd=1.0.3=r40h6115d3f_1 | |
| - r-rtsne=0.15=r40ha4e0109_3 | |
| - r-scales=1.1.1=r40h6115d3f_0 | |
| - r-sctransform=0.2.1=r40hc5da6b9_1 | |
| - r-seurat=3.2.1=r40h710217c_0 | |
| - r-shiny=1.5.0=r40h6115d3f_0 | |
| - r-sitmo=2.0.1=r40hc5da6b9_2 | |
| - r-sourcetools=0.1.7=r40h4a8c4bd_1002 | |
| - r-spatstat=1.64_1=r40hc5da6b9_0 | |
| - r-spatstat.data=1.4_3=r40h6115d3f_1 | |
| - r-spatstat.utils=1.17_0=r40h0b31af3_1 | |
| - r-stringi=1.5.3=r40ha4098bd_0 | |
| - r-stringr=1.4.0=r40h6115d3f_2 | |
| - r-survival=3.2_3=r40h17f1fa6_0 | |
| - r-sys=3.4=r40h800e0f2_0 | |
| - r-tensor=1.5=r40h6115d3f_1003 | |
| - r-testthat=2.3.2=r40hc5da6b9_1 | |
| - r-tibble=3.0.3=r40h17f1fa6_0 | |
| - r-tidyr=1.1.2=r40h710217c_0 | |
| - r-tidyselect=1.1.0=r40h6115d3f_0 | |
| - r-utf8=1.1.4=r40h17f1fa6_1003 | |
| - r-uwot=0.1.8=r40hc5da6b9_1 | |
| - r-vctrs=0.3.4=r40h800e0f2_0 | |
| - r-viridislite=0.3.0=r40h6115d3f_1003 | |
| - r-withr=2.2.0=r40h6115d3f_1 | |
| - r-xtable=1.8_4=r40h6115d3f_3 | |
| - r-yaml=2.2.1=r40h17f1fa6_1 | |
| - r-zeallot=0.1.0=r40h6115d3f_1002 | |
| - r-zoo=1.8_8=r40h17f1fa6_0 | |
| - readline=8.0=h0678c8f_2 | |
| - scikit-learn=0.23.2=py38hfde8033_0 | |
| - scipy=1.5.2=py38h1402333_0 | |
| - setuptools=49.6.0=py38h32f6830_1 | |
| - spectra=0.0.11=py_1 | |
| - sqlite=3.33.0=h960bd1c_0 | |
| - tapi=1000.10.8=h879752b_4 | |
| - tbb=2019.9=ha1b3eb9_1 | |
| - threadpoolctl=2.1.0=pyh5ca1d4c_0 | |
| - tk=8.6.10=hb0a8c7a_0 | |
| - tktable=2.10=h008db23_3 | |
| - umap-learn=0.4.6=py38h32f6830_0 | |
| - wheel=0.35.1=pyh9f0ad1d_0 | |
| - xz=5.2.5=haf1e3a3_1 | |
| - zlib=1.2.11=h7795811_1009 | |
| - zstd=1.4.5=h289c70a_2 |
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| name: so-seurat | |
| channels: | |
| - conda-forge | |
| - bioconda | |
| - defaults | |
| dependencies: | |
| - r-base=4.0 | |
| - r-seurat | |
| - python=3.8 | |
| - umap-learn |
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