Created
January 17, 2023 16:38
-
-
Save mikelove/258d0c719b07b654e79bb31e663109b1 to your computer and use it in GitHub Desktop.
pkgDependencyGain
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# edited from this function: https://github.com/seandavi/BiocPkgTools/blob/HEAD/R/pkgDependencyMetrics.R#L232 | |
pkgDependencyGain <- function(pkg, depdf, depsToRemove) { | |
## fetch dependency graph | |
g <- buildPkgDependencyIgraph(depdf) | |
## exclude 'R', 'base' and 'methods' | |
excludedpkgs <- c("R", "base", "methods") | |
g <- igraph::induced_subgraph(g, setdiff(names(V(g)), excludedpkgs)) | |
## get all reachable dependencies | |
deppkgs <- igraph::subcomponent(g, pkg, mode="out") | |
## get the induced subgraph of dependencies for 'pkg' | |
g.pkg <- igraph::induced_subgraph(g, deppkgs) | |
BiocPkgTools:::.getDepGain(g = g.pkg, pkg = pkg, depsToRemove = depsToRemove) | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment