tiff_loder.py

'''
loading multiple tif files and store them in a list. 
'''
import os
from ij import IJ
from ij.io import DirectoryChooser
 
def run():
  srcDir = DirectoryChooser("Choose!").getDirectory()
	IJ.log("directory: "+srcDir)
	imps = []
	for root, directories, filenames in os.walk(srcDir):
		for filename in filenames:
			if not filename.endswith(".tif"):
				continue
			print filename
			fullpath = os.path.join(root, filename)
			print fullpath
			imp = ImagePlus(fullpath)
 			imps.append(imp)
 	return imps
	

imps = run()
print len(imps)