Skip to content

Instantly share code, notes, and snippets.

@mjuric
Created June 29, 2015 23:04
Show Gist options
  • Save mjuric/0e485df452ceb795ff3d to your computer and use it in GitHub Desktop.
Save mjuric/0e485df452ceb795ff3d to your computer and use it in GitHub Desktop.
The commands used in the demo to UW LSST group on 2015-06-25, of ipython_eups and Conda packaging of LSST stack
##########################################
# Cleanup of the environment for the demo
rm -f ~/.eups/default
rm -rf ~/demo
rm -rf ~/miniconda
#####################################################
# Demo of miniconda
#
# Get conda from:
# http://conda.pydata.org/miniconda.html
cd $HOME
mkdir demo && cd demo
wget https://repo.continuum.io/miniconda/Miniconda-latest-MacOSX-x86_64.sh
bash Miniconda-latest-MacOSX-x86_64.sh -b
# Put it on your path
export PATH="$HOME/miniconda/bin:$PATH"
alias conda="time conda"
conda list
# Install numpy
conda install numpy
# Install sqlalchemy
conda install sqlalchemy
# Install IPython
conda install ipython-notebook
#####################################
# Demo of ipython_eups
# get MAF
cd $HOME/demo
git clone [email protected]:mjuric/sims_maf_notebooks.git
cd sims_maf_notebooks/notebooks
ln -s ~/projects/sims_maf_notebooks/notebooks/enigma_1189_sqlite.db
ls -l
ipython notebook AstrometryMetrics.ipynb
# show the git repo, discuss README.md
# website: https://github.com/mjuric/ipython_eups
# Install ipython_eups
cd $HOME/demo
wget http://eupsforge.net/ipython-eups
chmod +x ipython-eups
alias ipython="$PWD/ipython-eups"
# run the notebook
wget https://raw.githubusercontent.com/mjuric/ipython_eups/master/doc/eups-magics-overview.ipynb
ipython notebook eups-magics-overview.ipynb
# I have EUPS installed in /Users/mjuric/projects/eups
# I have the directives prepared in eups_magics
cd sims_maf_notebooks/notebooks
git checkout eups_magics
ls -l
ipython notebook AstrometryMetrics.ipynb
# If you want to know more:
# https://github.com/mjuric/ipython_eups
########################################################
# Demo of conda-distributed LSST stack (binary installs)
# Conda package manager: http://conda.pydata.org/docs/
# Add mjuric's binary channel http://anaconda.org
cd $HOME/demo
conda config --add channels http://conda.anaconda.org/mjuric
# Install MAF (binary distrib!)
conda install sims_maf
# cheat a bit to speed things up
# rm -rf ~/miniconda
# mv ~/miniconda.with_stack ~/miniconda
# conda list
# setup EUPS
eups # it's not there (this will result in an error)
source eups-setups.sh # now it will be source into the environment
eups list
# run the MAF notebook again
cd sims_maf_notebooks/notebooks
git checkout master
setup sims_maf
ipython notebook AstrometryMetrics.ipynb
# if you want to know more:
# https://github.com/mjuric/incubator/tree/master/conda-recipes
# WARNING: This is a hack, needs cleaning up.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment