Created
September 4, 2020 18:30
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Minimal R Version
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#!/usr/bin/env Rscript | |
#' Minimal R version | |
#' | |
#' Find the lowest accepted R version for a package and all of its dependencies | |
#' | |
#' @param package Name of CRAN package | |
#' | |
#' @return A \code{\link[base]{numeric_version}} with the lowest possible R | |
#' version to install \code{package} and all of its dependencies | |
#' | |
#' @export | |
#' | |
#' @examples | |
#' MinimalRVersion("Seurat") | |
#' | |
MinimalRVersion <- function(package) { | |
db <- utils::available.packages() | |
deps <- unlist( | |
x = tools::package_dependencies( | |
packages = package, | |
db = db, | |
recursive = TRUE | |
), | |
use.names = FALSE | |
) | |
deps <- c(package, intersect(x = deps, y = rownames(x = db))) | |
db <- db[deps, c('Depends', 'Imports', 'LinkingTo')] | |
rversions <- apply( | |
X = db, | |
MARGIN = 1, | |
FUN = function(row) { | |
row <- trimws(x = unlist( | |
x = strsplit(x = row, split = ','), | |
use.names = FALSE | |
)) | |
row <- grep(pattern = '^R \\(', x = row, value = TRUE) | |
if (!length(x = row)) { | |
return(NULL) | |
} | |
version <- unlist(x = regmatches( | |
x = row, | |
m = regexec(pattern = '\\d+\\.\\d+\\.\\d+', text = row) | |
)) | |
if (!length(x = version)) { | |
version <- NULL | |
} | |
return(version) | |
} | |
) | |
rversions <- unlist( | |
x = Filter(f = Negate(f = is.null), x = rversions), | |
use.names = FALSE | |
) | |
rversions <- lapply( | |
X = rversions, | |
FUN = numeric_version | |
) | |
return(Reduce(f = max, x = rversions)) | |
} |
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