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mtholder/force_oti_reindexing_of_non_namespaced_ids.py

Created June 12, 2014 04:31
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force_oti_reindexing_of_non_namespaced_ids.py
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force_oti_reindexing_of_non_namespaced_ids.py
#!/usr/bin/env python
import sys
from peyotl.api import APIWrapper
aw = APIWrapper(phylesystem_api_kwargs={'get_from':'api'})
pa = aw.phylesystem_api
o = aw.oti
for line in open(sys.argv[1], 'rU'):
ls = line.strip()
if '_' in ls:
continue
print o.trigger_unindex(ls)
print o.trigger_index(pa, 'pg_' + ls)
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