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import numpy as np | |
# https://arxiv.org/abs/2001.04147 | |
# WEICA: nonlinear weighted ICA | |
# http://ww2.ii.uj.edu.pl/~spurek/publications/WeICA.pdf | |
# I ported this algorithm in C with `few changes` in step 4 and 5 | |
# to avoid terrible cancellation errors happening with single-precision | |
# floats e.g handling (mat_mul) Tall and Skinny matrix with float is always an issue. | |
class weica: | |
def fit(self, x): | |
# step 1. Whiten data | |
x = x - x.mean(axis = 0) | |
uX, sX, vhX = np.linalg.svd(x, full_matrices=False) | |
sXinv = np.diag(1 / sX) | |
# Short-hand ^-1/2 term see below. | |
covinvsqrt = vhX.T @ sXinv @ vhX / (x.shape[0] - 1) | |
# step 2. Y = COV(Y)^(-1/2) * (X - MEAN(X)) | |
Y = x @ covinvsqrt | |
# step 3. MY = SUM(NORM(yi)^2 * yi * yi^T) | |
MY = np.zeros([Y.shape[1], Y.shape[1]]) | |
for i in range(Y.shape[0]): | |
MY += (np.linalg.norm(Y[i,:]) ** 2) * np.outer(Y[i,:], Y[i,:]) | |
# step 4. Unmixing Matrix W | |
# W = cov(Y)^(-1/2) * Eigenvector(MY) | |
wMY, vMY = np.linalg.eig(MY) | |
Wunmixing = vMY.T @ covinvsqrt | |
# step 5. unmixed data: | |
x_unmixed = x @ Wunmixing.T | |
return x_unmixed |
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