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derep_fulllength heap profile
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| desc: (none) | |
| cmd: ./vsearch --derep_fulllength all.fasta --sizein --sizeout --output all.derep.test.fasta | |
| time_unit: i | |
| #----------- | |
| snapshot=0 | |
| #----------- | |
| time=0 | |
| mem_heap_B=0 | |
| mem_heap_extra_B=0 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=1 | |
| #----------- | |
| time=3948683 | |
| mem_heap_B=84449756 | |
| mem_heap_extra_B=4380 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n2: 84449756 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n2: 83929448 0x114858: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 83886080 0x11DA75: derep_fulllength() (derep.cc:248) | |
| n0: 83886080 0x10CE18: main (vsearch.cc:2909) | |
| n0: 43368 in 8 places, all below massif's threshold (1.00%) | |
| n0: 520308 in 10 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=2 | |
| #----------- | |
| time=13124048 | |
| mem_heap_B=88644060 | |
| mem_heap_extra_B=8420 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=3 | |
| #----------- | |
| time=17999404 | |
| mem_heap_B=89834614 | |
| mem_heap_extra_B=18034 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=4 | |
| #----------- | |
| time=26022026 | |
| mem_heap_B=90096611 | |
| mem_heap_extra_B=43221 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=5 | |
| #----------- | |
| time=31853324 | |
| mem_heap_B=90202608 | |
| mem_heap_extra_B=50424 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=6 | |
| #----------- | |
| time=36660969 | |
| mem_heap_B=90337631 | |
| mem_heap_extra_B=61673 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=7 | |
| #----------- | |
| time=41777382 | |
| mem_heap_B=90419052 | |
| mem_heap_extra_B=71452 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=8 | |
| #----------- | |
| time=48115799 | |
| mem_heap_B=90561125 | |
| mem_heap_extra_B=88371 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=9 | |
| #----------- | |
| time=51375309 | |
| mem_heap_B=90609187 | |
| mem_heap_extra_B=94117 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=10 | |
| #----------- | |
| time=58069939 | |
| mem_heap_B=90717793 | |
| mem_heap_extra_B=107111 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=11 | |
| #----------- | |
| time=65925455 | |
| mem_heap_B=90839962 | |
| mem_heap_extra_B=121742 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=12 | |
| #----------- | |
| time=71595539 | |
| mem_heap_B=90927080 | |
| mem_heap_extra_B=132208 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n2: 90927080 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n5: 90406772 0x114858: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 83886080 0x11DA75: derep_fulllength() (derep.cc:248) | |
| n0: 83886080 0x10CE18: main (vsearch.cc:2909) | |
| n1: 4194304 0x11DA97: derep_fulllength() (derep.cc:256) | |
| n0: 4194304 0x10CE18: main (vsearch.cc:2909) | |
| n2: 1232367 0x14236E: xstrdup(char const*) (util.cc:146) | |
| n1: 1154559 0x11DED7: derep_fulllength() (derep.cc:430) | |
| n0: 1154559 0x10CE18: main (vsearch.cc:2909) | |
| n0: 77808 in 1 place, below massif's threshold (1.00%) | |
| n1: 1048576 0x11DABF: derep_fulllength() (derep.cc:262) | |
| n0: 1048576 0x10CE18: main (vsearch.cc:2909) | |
| n0: 45445 in 11 places, all below massif's threshold (1.00%) | |
| n0: 520308 in 10 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=13 | |
| #----------- | |
| time=79097878 | |
| mem_heap_B=91057068 | |
| mem_heap_extra_B=147836 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=14 | |
| #----------- | |
| time=84794349 | |
| mem_heap_B=91125065 | |
| mem_heap_extra_B=155839 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=15 | |
| #----------- | |
| time=93373916 | |
| mem_heap_B=91289213 | |
| mem_heap_extra_B=175307 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=16 | |
| #----------- | |
| time=98485723 | |
| mem_heap_B=91301692 | |
| mem_heap_extra_B=176812 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=17 | |
| #----------- | |
| time=103791466 | |
| mem_heap_B=91396697 | |
| mem_heap_extra_B=188207 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=18 | |
| #----------- | |
| time=109630776 | |
| mem_heap_B=91532896 | |
| mem_heap_extra_B=204008 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=19 | |
| #----------- | |
| time=117745143 | |
| mem_heap_B=91715959 | |
| mem_heap_extra_B=225233 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=20 | |
| #----------- | |
| time=123844524 | |
| mem_heap_B=91750710 | |
| mem_heap_extra_B=229394 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=21 | |
| #----------- | |
| time=130417920 | |
| mem_heap_B=91886642 | |
| mem_heap_extra_B=245462 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=22 | |
| #----------- | |
| time=134223651 | |
| mem_heap_B=91954761 | |
| mem_heap_extra_B=253343 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=23 | |
| #----------- | |
| time=140640559 | |
| mem_heap_B=92025066 | |
| mem_heap_extra_B=261470 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=24 | |
| #----------- | |
| time=148366867 | |
| mem_heap_B=92145150 | |
| mem_heap_extra_B=275754 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=25 | |
| #----------- | |
| time=152878765 | |
| mem_heap_B=92240572 | |
| mem_heap_extra_B=286732 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=26 | |
| #----------- | |
| time=159341961 | |
| mem_heap_B=92369793 | |
| mem_heap_extra_B=301607 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=27 | |
| #----------- | |
| time=164073225 | |
| mem_heap_B=92404015 | |
| mem_heap_extra_B=305689 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=28 | |
| #----------- | |
| time=168878926 | |
| mem_heap_B=92485514 | |
| mem_heap_extra_B=315390 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=29 | |
| #----------- | |
| time=176111343 | |
| mem_heap_B=92539912 | |
| mem_heap_extra_B=321344 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=30 | |
| #----------- | |
| time=180989305 | |
| mem_heap_B=92620818 | |
| mem_heap_extra_B=326838 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=31 | |
| #----------- | |
| time=186001711 | |
| mem_heap_B=92728987 | |
| mem_heap_extra_B=338765 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=32 | |
| #----------- | |
| time=191679780 | |
| mem_heap_B=92850763 | |
| mem_heap_extra_B=353789 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=33 | |
| #----------- | |
| time=197444432 | |
| mem_heap_B=92972573 | |
| mem_heap_extra_B=368779 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=34 | |
| #----------- | |
| time=202560576 | |
| mem_heap_B=93013026 | |
| mem_heap_extra_B=371958 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=35 | |
| #----------- | |
| time=208051990 | |
| mem_heap_B=93093891 | |
| mem_heap_extra_B=377493 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=36 | |
| #----------- | |
| time=214144067 | |
| mem_heap_B=93147860 | |
| mem_heap_extra_B=381428 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=37 | |
| #----------- | |
| time=222997199 | |
| mem_heap_B=93242267 | |
| mem_heap_extra_B=387821 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=38 | |
| #----------- | |
| time=229354537 | |
| mem_heap_B=93350186 | |
| mem_heap_extra_B=396110 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=39 | |
| #----------- | |
| time=235053934 | |
| mem_heap_B=93404279 | |
| mem_heap_extra_B=402241 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=40 | |
| #----------- | |
| time=240400877 | |
| mem_heap_B=93471680 | |
| mem_heap_extra_B=406840 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=41 | |
| #----------- | |
| time=247521509 | |
| mem_heap_B=93539120 | |
| mem_heap_extra_B=411400 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=42 | |
| #----------- | |
| time=251814802 | |
| mem_heap_B=93606553 | |
| mem_heap_extra_B=415967 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=43 | |
| #----------- | |
| time=258691989 | |
| mem_heap_B=93674009 | |
| mem_heap_extra_B=420799 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=44 | |
| #----------- | |
| time=266464529 | |
| mem_heap_B=93809043 | |
| mem_heap_extra_B=432869 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=45 | |
| #----------- | |
| time=270699781 | |
| mem_heap_B=127443906 | |
| mem_heap_extra_B=445518 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=46 | |
| #----------- | |
| time=2094757054 | |
| mem_heap_B=127443906 | |
| mem_heap_extra_B=445518 | |
| mem_stacks_B=0 | |
| heap_tree=peak | |
| n3: 127443906 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n4: 93373774 0x114858: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 83886080 0x11DA75: derep_fulllength() (derep.cc:248) | |
| n0: 83886080 0x10CE18: main (vsearch.cc:2909) | |
| n2: 4244702 0x14236E: xstrdup(char const*) (util.cc:146) | |
| n1: 3972658 0x11DED7: derep_fulllength() (derep.cc:430) | |
| n0: 3972658 0x10CE18: main (vsearch.cc:2909) | |
| n0: 272044 in 1 place, below massif's threshold (1.00%) | |
| n1: 4194304 0x11DA97: derep_fulllength() (derep.cc:256) | |
| n0: 4194304 0x10CE18: main (vsearch.cc:2909) | |
| n0: 1048688 in 12 places, all below massif's threshold (1.00%) | |
| n1: 33554472 0x4BEEA15: qsort_r (in /usr/lib/libc-2.28.so) | |
| n1: 33554472 0x11E355: derep_fulllength() (derep.cc:522) | |
| n0: 33554472 0x10CE18: main (vsearch.cc:2909) | |
| n0: 515660 in 10 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=47 | |
| #----------- | |
| time=2094953950 | |
| mem_heap_B=93893530 | |
| mem_heap_extra_B=441526 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=48 | |
| #----------- | |
| time=2163463861 | |
| mem_heap_B=93889434 | |
| mem_heap_extra_B=441518 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=49 | |
| #----------- | |
| time=2163537534 | |
| mem_heap_B=93774396 | |
| mem_heap_extra_B=431972 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=50 | |
| #----------- | |
| time=2163611232 | |
| mem_heap_B=93659079 | |
| mem_heap_extra_B=420121 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=51 | |
| #----------- | |
| time=2163684930 | |
| mem_heap_B=93543679 | |
| mem_heap_extra_B=407793 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=52 | |
| #----------- | |
| time=2163758628 | |
| mem_heap_B=93428225 | |
| mem_heap_extra_B=395263 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=53 | |
| #----------- | |
| time=2163832326 | |
| mem_heap_B=93313084 | |
| mem_heap_extra_B=384612 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=54 | |
| #----------- | |
| time=2163906024 | |
| mem_heap_B=93197426 | |
| mem_heap_extra_B=370798 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=55 | |
| #----------- | |
| time=2163979722 | |
| mem_heap_B=93081581 | |
| mem_heap_extra_B=357139 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n2: 93081581 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n5: 92566473 0x114858: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 83886080 0x11DA75: derep_fulllength() (derep.cc:248) | |
| n0: 83886080 0x10CE18: main (vsearch.cc:2909) | |
| n1: 4194304 0x11DA97: derep_fulllength() (derep.cc:256) | |
| n0: 4194304 0x10CE18: main (vsearch.cc:2909) | |
| n2: 3437401 0x14236E: xstrdup(char const*) (util.cc:146) | |
| n1: 3217335 0x11DED7: derep_fulllength() (derep.cc:430) | |
| n0: 3217335 0x10CE18: main (vsearch.cc:2909) | |
| n0: 220066 in 1 place, below massif's threshold (1.00%) | |
| n1: 1048576 0x11DABF: derep_fulllength() (derep.cc:262) | |
| n0: 1048576 0x10CE18: main (vsearch.cc:2909) | |
| n0: 112 in 11 places, all below massif's threshold (1.00%) | |
| n0: 515108 in 11 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=56 | |
| #----------- | |
| time=2164053420 | |
| mem_heap_B=92966381 | |
| mem_heap_extra_B=346163 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=57 | |
| #----------- | |
| time=2164127118 | |
| mem_heap_B=92851202 | |
| mem_heap_extra_B=333918 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=58 | |
| #----------- | |
| time=2164200816 | |
| mem_heap_B=92736181 | |
| mem_heap_extra_B=324507 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=59 | |
| #----------- | |
| time=2164274514 | |
| mem_heap_B=92621234 | |
| mem_heap_extra_B=316382 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=60 | |
| #----------- | |
| time=2164348212 | |
| mem_heap_B=92505649 | |
| mem_heap_extra_B=303823 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=61 | |
| #----------- | |
| time=2164421930 | |
| mem_heap_B=92389956 | |
| mem_heap_extra_B=290012 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=62 | |
| #----------- | |
| time=2164495628 | |
| mem_heap_B=92274290 | |
| mem_heap_extra_B=276174 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=63 | |
| #----------- | |
| time=2164569326 | |
| mem_heap_B=92158561 | |
| mem_heap_extra_B=262399 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=64 | |
| #----------- | |
| time=2164643024 | |
| mem_heap_B=92042820 | |
| mem_heap_extra_B=248636 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=65 | |
| #----------- | |
| time=2164716722 | |
| mem_heap_B=91926912 | |
| mem_heap_extra_B=235040 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n2: 91926912 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n5: 91411804 0x114858: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 83886080 0x11DA75: derep_fulllength() (derep.cc:248) | |
| n0: 83886080 0x10CE18: main (vsearch.cc:2909) | |
| n1: 4194304 0x11DA97: derep_fulllength() (derep.cc:256) | |
| n0: 4194304 0x10CE18: main (vsearch.cc:2909) | |
| n2: 2282732 0x14236E: xstrdup(char const*) (util.cc:146) | |
| n1: 2136953 0x11DED7: derep_fulllength() (derep.cc:430) | |
| n0: 2136953 0x10CE18: main (vsearch.cc:2909) | |
| n0: 145779 in 1 place, below massif's threshold (1.00%) | |
| n1: 1048576 0x11DABF: derep_fulllength() (derep.cc:262) | |
| n0: 1048576 0x10CE18: main (vsearch.cc:2909) | |
| n0: 112 in 11 places, all below massif's threshold (1.00%) | |
| n0: 515108 in 11 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=66 | |
| #----------- | |
| time=2164790420 | |
| mem_heap_B=91810859 | |
| mem_heap_extra_B=221589 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=67 | |
| #----------- | |
| time=2164864118 | |
| mem_heap_B=91694916 | |
| mem_heap_extra_B=208028 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=68 | |
| #----------- | |
| time=2164937816 | |
| mem_heap_B=91578987 | |
| mem_heap_extra_B=194453 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=69 | |
| #----------- | |
| time=2165011514 | |
| mem_heap_B=91462995 | |
| mem_heap_extra_B=180941 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=70 | |
| #----------- | |
| time=2165085212 | |
| mem_heap_B=91347133 | |
| mem_heap_extra_B=167299 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=71 | |
| #----------- | |
| time=2165158910 | |
| mem_heap_B=91231007 | |
| mem_heap_extra_B=153921 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=72 | |
| #----------- | |
| time=2165232608 | |
| mem_heap_B=91115113 | |
| mem_heap_extra_B=140311 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=73 | |
| #----------- | |
| time=2165306306 | |
| mem_heap_B=90999270 | |
| mem_heap_extra_B=126650 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=74 | |
| #----------- | |
| time=2165380004 | |
| mem_heap_B=90883730 | |
| mem_heap_extra_B=112686 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=75 | |
| #----------- | |
| time=2165453702 | |
| mem_heap_B=90768439 | |
| mem_heap_extra_B=98473 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n2: 90768439 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n5: 90253331 0x114858: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 83886080 0x11DA75: derep_fulllength() (derep.cc:248) | |
| n0: 83886080 0x10CE18: main (vsearch.cc:2909) | |
| n1: 4194304 0x11DA97: derep_fulllength() (derep.cc:256) | |
| n0: 4194304 0x10CE18: main (vsearch.cc:2909) | |
| n2: 1124259 0x14236E: xstrdup(char const*) (util.cc:146) | |
| n1: 1056718 0x11DED7: derep_fulllength() (derep.cc:430) | |
| n0: 1056718 0x10CE18: main (vsearch.cc:2909) | |
| n0: 67541 in 1 place, below massif's threshold (1.00%) | |
| n1: 1048576 0x11DABF: derep_fulllength() (derep.cc:262) | |
| n0: 1048576 0x10CE18: main (vsearch.cc:2909) | |
| n0: 112 in 11 places, all below massif's threshold (1.00%) | |
| n0: 515108 in 11 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=76 | |
| #----------- | |
| time=2165527400 | |
| mem_heap_B=90653128 | |
| mem_heap_extra_B=84280 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=77 | |
| #----------- | |
| time=2165601098 | |
| mem_heap_B=90538182 | |
| mem_heap_extra_B=75370 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=78 | |
| #----------- | |
| time=2165674796 | |
| mem_heap_B=90423342 | |
| mem_heap_extra_B=67522 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=79 | |
| #----------- | |
| time=2165748494 | |
| mem_heap_B=90308330 | |
| mem_heap_extra_B=58246 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=80 | |
| #----------- | |
| time=2165822192 | |
| mem_heap_B=90193341 | |
| mem_heap_extra_B=48595 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=81 | |
| #----------- | |
| time=2165895890 | |
| mem_heap_B=90078484 | |
| mem_heap_extra_B=40684 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=82 | |
| #----------- | |
| time=2165969588 | |
| mem_heap_B=89963541 | |
| mem_heap_extra_B=32731 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=83 | |
| #----------- | |
| time=2166043286 | |
| mem_heap_B=89848436 | |
| mem_heap_extra_B=22092 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=84 | |
| #----------- | |
| time=2166116984 | |
| mem_heap_B=89733493 | |
| mem_heap_extra_B=14347 | |
| mem_stacks_B=0 | |
| heap_tree=empty |
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| desc: (none) | |
| cmd: ./vsearch --derep_fulllength all.fasta --sizein --sizeout --output all.derep.test.fasta | |
| time_unit: i | |
| #----------- | |
| snapshot=0 | |
| #----------- | |
| time=0 | |
| mem_heap_B=0 | |
| mem_heap_extra_B=0 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=1 | |
| #----------- | |
| time=3717496 | |
| mem_heap_B=72704 | |
| mem_heap_extra_B=8 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=2 | |
| #----------- | |
| time=3731271 | |
| mem_heap_B=72792 | |
| mem_heap_extra_B=24 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=3 | |
| #----------- | |
| time=3735452 | |
| mem_heap_B=72816 | |
| mem_heap_extra_B=40 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=4 | |
| #----------- | |
| time=3770457 | |
| mem_heap_B=72848 | |
| mem_heap_extra_B=48 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=5 | |
| #----------- | |
| time=3773808 | |
| mem_heap_B=72865 | |
| mem_heap_extra_B=71 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=6 | |
| #----------- | |
| time=3774388 | |
| mem_heap_B=74049 | |
| mem_heap_extra_B=79 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=7 | |
| #----------- | |
| time=3774542 | |
| mem_heap_B=74066 | |
| mem_heap_extra_B=102 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=8 | |
| #----------- | |
| time=3779269 | |
| mem_heap_B=74122 | |
| mem_heap_extra_B=118 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=9 | |
| #----------- | |
| time=3781021 | |
| mem_heap_B=74554 | |
| mem_heap_extra_B=126 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n3: 74554 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n1: 72704 0x4911469: _GLOBAL__sub_I_eh_alloc.cc (eh_alloc.cc:123) | |
| n1: 72704 0x4010548: call_init.part.0 (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4010648: _dl_init (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4002038: ??? (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x5: ??? | |
| n1: 72704 0x1FFF00078D: ??? | |
| n1: 72704 0x1FFF000797: ??? | |
| n1: 72704 0x1FFF0007AA: ??? | |
| n1: 72704 0x1FFF0007B4: ??? | |
| n1: 72704 0x1FFF0007BD: ??? | |
| n1: 72704 0x1FFF0007C7: ??? | |
| n0: 72704 0x1FFF0007D0: ??? | |
| n1: 1184 0x400C551: _dl_new_object (in /usr/lib/ld-2.28.so) | |
| n1: 1184 0x400711B: _dl_map_object_from_fd (in /usr/lib/ld-2.28.so) | |
| n1: 1184 0x4009D6A: _dl_map_object (in /usr/lib/ld-2.28.so) | |
| n1: 1184 0x401423D: dl_open_worker (in /usr/lib/ld-2.28.so) | |
| n1: 1184 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 1184 0x4013DFD: _dl_open (in /usr/lib/ld-2.28.so) | |
| n1: 1184 0x4860158: ??? (in /usr/lib/libdl-2.28.so) | |
| n1: 1184 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 1184 0x4CECF11: _dl_catch_error (in /usr/lib/libc-2.28.so) | |
| n1: 1184 0x48608BD: ??? (in /usr/lib/libdl-2.28.so) | |
| n1: 1184 0x48601F8: dlopen (in /usr/lib/libdl-2.28.so) | |
| n1: 1184 0x11EC93: dynlibs_open() (dynlibs.cc:120) | |
| n0: 1184 0x10CAD4: main (vsearch.cc:2891) | |
| n0: 666 in 6 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=10 | |
| #----------- | |
| time=3852319 | |
| mem_heap_B=74573 | |
| mem_heap_extra_B=147 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=11 | |
| #----------- | |
| time=3852908 | |
| mem_heap_B=75759 | |
| mem_heap_extra_B=169 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=12 | |
| #----------- | |
| time=3853062 | |
| mem_heap_B=75778 | |
| mem_heap_extra_B=190 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=13 | |
| #----------- | |
| time=3857738 | |
| mem_heap_B=75834 | |
| mem_heap_extra_B=206 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=14 | |
| #----------- | |
| time=3859278 | |
| mem_heap_B=75954 | |
| mem_heap_extra_B=222 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=15 | |
| #----------- | |
| time=3928197 | |
| mem_heap_B=76506 | |
| mem_heap_extra_B=238 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=16 | |
| #----------- | |
| time=3928696 | |
| mem_heap_B=78802 | |
| mem_heap_extra_B=254 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=17 | |
| #----------- | |
| time=3928778 | |
| mem_heap_B=79354 | |
| mem_heap_extra_B=270 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=18 | |
| #----------- | |
| time=3934620 | |
| mem_heap_B=83450 | |
| mem_heap_extra_B=278 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=19 | |
| #----------- | |
| time=3936897 | |
| mem_heap_B=83450 | |
| mem_heap_extra_B=278 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n6: 83450 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n1: 72704 0x4911469: _GLOBAL__sub_I_eh_alloc.cc (eh_alloc.cc:123) | |
| n1: 72704 0x4010548: call_init.part.0 (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4010648: _dl_init (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4002038: ??? (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x5: ??? | |
| n1: 72704 0x1FFF00078D: ??? | |
| n1: 72704 0x1FFF000797: ??? | |
| n1: 72704 0x1FFF0007AA: ??? | |
| n1: 72704 0x1FFF0007B4: ??? | |
| n1: 72704 0x1FFF0007BD: ??? | |
| n1: 72704 0x1FFF0007C7: ??? | |
| n0: 72704 0x1FFF0007D0: ??? | |
| n1: 4096 0x4C2578F: _IO_file_doallocate (in /usr/lib/libc-2.28.so) | |
| n1: 4096 0x4C33BBE: _IO_doallocbuf (in /usr/lib/libc-2.28.so) | |
| n1: 4096 0x4C31C13: _IO_file_xsgetn (in /usr/lib/libc-2.28.so) | |
| n1: 4096 0x4C26779: fread (in /usr/lib/libc-2.28.so) | |
| n1: 4096 0x1256DF: fastx_open(char const*) (fastx.cc:199) | |
| n1: 4096 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 4096 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 4096 0x10CDFA: main (vsearch.cc:2909) | |
| n2: 2408 0x11456E: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 2296 0x125409: fastx_open(char const*) (fastx.cc:148) | |
| n1: 2296 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 2296 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 2296 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 112 in 2 places, all below massif's threshold (1.00%) | |
| n1: 2370 0x400C551: _dl_new_object (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x400711B: _dl_map_object_from_fd (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4009D6A: _dl_map_object (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x401423D: dl_open_worker (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x4013DFD: _dl_open (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4860158: ??? (in /usr/lib/libdl-2.28.so) | |
| n1: 2370 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x4CECF11: _dl_catch_error (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x48608BD: ??? (in /usr/lib/libdl-2.28.so) | |
| n2: 2370 0x48601F8: dlopen (in /usr/lib/libdl-2.28.so) | |
| n1: 1186 0x11ED66: dynlibs_open() (dynlibs.cc:138) | |
| n0: 1186 0x10CAD4: main (vsearch.cc:2891) | |
| n1: 1184 0x11EC93: dynlibs_open() (dynlibs.cc:120) | |
| n0: 1184 0x10CAD4: main (vsearch.cc:2891) | |
| n1: 1104 0x4C2619E: __fopen_internal (in /usr/lib/libc-2.28.so) | |
| n0: 1104 in 2 places, all below massif's threshold (1.00%) | |
| n0: 768 in 5 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=20 | |
| #----------- | |
| time=3936897 | |
| mem_heap_B=79354 | |
| mem_heap_extra_B=270 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=21 | |
| #----------- | |
| time=3937027 | |
| mem_heap_B=78802 | |
| mem_heap_extra_B=254 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=22 | |
| #----------- | |
| time=3937086 | |
| mem_heap_B=79354 | |
| mem_heap_extra_B=270 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=23 | |
| #----------- | |
| time=3937574 | |
| mem_heap_B=87546 | |
| mem_heap_extra_B=278 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=24 | |
| #----------- | |
| time=3937798 | |
| mem_heap_B=91642 | |
| mem_heap_extra_B=286 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=25 | |
| #----------- | |
| time=3939886 | |
| mem_heap_B=99834 | |
| mem_heap_extra_B=294 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=26 | |
| #----------- | |
| time=3939979 | |
| mem_heap_B=108026 | |
| mem_heap_extra_B=302 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=27 | |
| #----------- | |
| time=3940072 | |
| mem_heap_B=116218 | |
| mem_heap_extra_B=310 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=28 | |
| #----------- | |
| time=3940165 | |
| mem_heap_B=124410 | |
| mem_heap_extra_B=318 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=29 | |
| #----------- | |
| time=3944768 | |
| mem_heap_B=124433 | |
| mem_heap_extra_B=335 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n5: 124433 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n1: 72704 0x4911469: _GLOBAL__sub_I_eh_alloc.cc (eh_alloc.cc:123) | |
| n1: 72704 0x4010548: call_init.part.0 (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4010648: _dl_init (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4002038: ??? (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x5: ??? | |
| n1: 72704 0x1FFF00078D: ??? | |
| n1: 72704 0x1FFF000797: ??? | |
| n1: 72704 0x1FFF0007AA: ??? | |
| n1: 72704 0x1FFF0007B4: ??? | |
| n1: 72704 0x1FFF0007BD: ??? | |
| n1: 72704 0x1FFF0007C7: ??? | |
| n0: 72704 0x1FFF0007D0: ??? | |
| n7: 43391 0x11456E: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 8192 0x1254F4: fastx_open(char const*) (fastx.cc:89) | |
| n1: 8192 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 8192 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 8192 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 8192 0x12554B: fastx_open(char const*) (fastx.cc:89) | |
| n1: 8192 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 8192 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 8192 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 8192 0x125574: fastx_open(char const*) (fastx.cc:89) | |
| n1: 8192 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 8192 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 8192 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 8192 0x1255A0: fastx_open(char const*) (fastx.cc:89) | |
| n1: 8192 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 8192 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 8192 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 8192 0x1255D5: fastx_open(char const*) (fastx.cc:89) | |
| n1: 8192 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 8192 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 8192 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 2296 0x125409: fastx_open(char const*) (fastx.cc:148) | |
| n1: 2296 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 2296 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 2296 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 135 in 3 places, all below massif's threshold (1.00%) | |
| n1: 4096 0x4C2578F: _IO_file_doallocate (in /usr/lib/libc-2.28.so) | |
| n1: 4096 0x4C33BBE: _IO_doallocbuf (in /usr/lib/libc-2.28.so) | |
| n1: 4096 0x4C31C13: _IO_file_xsgetn (in /usr/lib/libc-2.28.so) | |
| n2: 4096 0x4C26779: fread (in /usr/lib/libc-2.28.so) | |
| n1: 4096 0x125343: fastx_file_fill_buffer(fastx_s*) (fastx.cc:435) | |
| n1: 4096 0x125513: fastx_open(char const*) (fastx.cc:252) | |
| n1: 4096 0x11B6C6: db_read(char const*, int) (db.cc:106) | |
| n1: 4096 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 4096 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 0 in 1 place, below massif's threshold (1.00%) | |
| n1: 2370 0x400C551: _dl_new_object (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x400711B: _dl_map_object_from_fd (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4009D6A: _dl_map_object (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x401423D: dl_open_worker (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x4013DFD: _dl_open (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4860158: ??? (in /usr/lib/libdl-2.28.so) | |
| n1: 2370 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x4CECF11: _dl_catch_error (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x48608BD: ??? (in /usr/lib/libdl-2.28.so) | |
| n1: 2370 0x48601F8: dlopen (in /usr/lib/libdl-2.28.so) | |
| n0: 2370 in 2 places, all below massif's threshold (1.00%) | |
| n0: 1872 in 6 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=30 | |
| #----------- | |
| time=3967325 | |
| mem_heap_B=16901649 | |
| mem_heap_extra_B=4375 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=31 | |
| #----------- | |
| time=3967524 | |
| mem_heap_B=33678865 | |
| mem_heap_extra_B=8415 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=32 | |
| #----------- | |
| time=112675213 | |
| mem_heap_B=33678865 | |
| mem_heap_extra_B=8415 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n2: 33678865 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n2: 33554432 0x1145C3: xrealloc(void*, unsigned long) (arch.cc:223) | |
| n1: 16777216 0x11BCA7: db_read(char const*, int) (db.cc:170) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 16777216 0x11BCD8: db_read(char const*, int) (db.cc:201) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 124433 in 10 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=33 | |
| #----------- | |
| time=112675213 | |
| mem_heap_B=33678842 | |
| mem_heap_extra_B=8398 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=34 | |
| #----------- | |
| time=112675485 | |
| mem_heap_B=33674746 | |
| mem_heap_extra_B=8390 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=35 | |
| #----------- | |
| time=112675615 | |
| mem_heap_B=33674194 | |
| mem_heap_extra_B=8374 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=36 | |
| #----------- | |
| time=112675654 | |
| mem_heap_B=33666002 | |
| mem_heap_extra_B=8366 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=37 | |
| #----------- | |
| time=112675691 | |
| mem_heap_B=33657810 | |
| mem_heap_extra_B=8358 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=38 | |
| #----------- | |
| time=112675728 | |
| mem_heap_B=33649618 | |
| mem_heap_extra_B=8350 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=39 | |
| #----------- | |
| time=112675765 | |
| mem_heap_B=33641426 | |
| mem_heap_extra_B=8342 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=40 | |
| #----------- | |
| time=112675802 | |
| mem_heap_B=33633234 | |
| mem_heap_extra_B=8334 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=41 | |
| #----------- | |
| time=112675841 | |
| mem_heap_B=33630938 | |
| mem_heap_extra_B=8318 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=42 | |
| #----------- | |
| time=112680135 | |
| mem_heap_B=35203802 | |
| mem_heap_extra_B=8326 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n3: 35203802 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n2: 33554432 0x1145C3: xrealloc(void*, unsigned long) (arch.cc:223) | |
| n1: 16777216 0x11BCA7: db_read(char const*, int) (db.cc:170) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 16777216 0x11BCD8: db_read(char const*, int) (db.cc:201) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n2: 1572976 0x11456E: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 1572864 0x11D44D: derep_fulllength() (derep.cc:182) | |
| n0: 1572864 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 112 in 9 places, all below massif's threshold (1.00%) | |
| n0: 76394 in 9 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=43 | |
| #----------- | |
| time=112852283 | |
| mem_heap_B=35307930 | |
| mem_heap_extra_B=8334 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=44 | |
| #----------- | |
| time=112863786 | |
| mem_heap_B=35333962 | |
| mem_heap_extra_B=8342 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=45 | |
| #----------- | |
| time=112866752 | |
| mem_heap_B=35334218 | |
| mem_heap_extra_B=8350 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=46 | |
| #----------- | |
| time=112866844 | |
| mem_heap_B=35334474 | |
| mem_heap_extra_B=8358 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=47 | |
| #----------- | |
| time=218438317 | |
| mem_heap_B=35334474 | |
| mem_heap_extra_B=8358 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n3: 35334474 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n2: 33554432 0x1145C3: xrealloc(void*, unsigned long) (arch.cc:223) | |
| n1: 16777216 0x11BCA7: db_read(char const*, int) (db.cc:170) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 16777216 0x11BCD8: db_read(char const*, int) (db.cc:201) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n2: 1703648 0x11456E: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 1572864 0x11D44D: derep_fulllength() (derep.cc:182) | |
| n0: 1572864 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 130784 in 13 places, all below massif's threshold (1.00%) | |
| n0: 76394 in 9 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=48 | |
| #----------- | |
| time=218438317 | |
| mem_heap_B=35334218 | |
| mem_heap_extra_B=8350 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=49 | |
| #----------- | |
| time=218438348 | |
| mem_heap_B=35333962 | |
| mem_heap_extra_B=8342 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=50 | |
| #----------- | |
| time=218442239 | |
| mem_heap_B=36906826 | |
| mem_heap_extra_B=8350 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=51 | |
| #----------- | |
| time=286805083 | |
| mem_heap_B=36906826 | |
| mem_heap_extra_B=8350 | |
| mem_stacks_B=0 | |
| heap_tree=peak | |
| n4: 36906826 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n2: 33554432 0x1145C3: xrealloc(void*, unsigned long) (arch.cc:223) | |
| n1: 16777216 0x11BCA7: db_read(char const*, int) (db.cc:170) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n1: 16777216 0x11BCD8: db_read(char const*, int) (db.cc:201) | |
| n1: 16777216 0x11D3F3: derep_fulllength() (derep.cc:164) | |
| n0: 16777216 0x10CDFA: main (vsearch.cc:2909) | |
| n2: 1703136 0x11456E: xmalloc(unsigned long) (arch.cc:208) | |
| n1: 1572864 0x11D44D: derep_fulllength() (derep.cc:182) | |
| n0: 1572864 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 130272 in 13 places, all below massif's threshold (1.00%) | |
| n1: 1572864 0x4BEEA15: qsort_r (in /usr/lib/libc-2.28.so) | |
| n1: 1572864 0x11D73B: derep_fulllength() (derep.cc:333) | |
| n0: 1572864 0x10CDFA: main (vsearch.cc:2909) | |
| n0: 76394 in 9 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=52 | |
| #----------- | |
| time=286805083 | |
| mem_heap_B=35333962 | |
| mem_heap_extra_B=8342 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=53 | |
| #----------- | |
| time=287001582 | |
| mem_heap_B=35338058 | |
| mem_heap_extra_B=8350 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=54 | |
| #----------- | |
| time=350510382 | |
| mem_heap_B=35333962 | |
| mem_heap_extra_B=8342 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=55 | |
| #----------- | |
| time=350510512 | |
| mem_heap_B=35333410 | |
| mem_heap_extra_B=8326 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=56 | |
| #----------- | |
| time=350510555 | |
| mem_heap_B=35307378 | |
| mem_heap_extra_B=8318 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=57 | |
| #----------- | |
| time=350510586 | |
| mem_heap_B=35203250 | |
| mem_heap_extra_B=8310 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=58 | |
| #----------- | |
| time=350510617 | |
| mem_heap_B=33630386 | |
| mem_heap_extra_B=8302 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=59 | |
| #----------- | |
| time=350510659 | |
| mem_heap_B=16853170 | |
| mem_heap_extra_B=4262 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=60 | |
| #----------- | |
| time=350510693 | |
| mem_heap_B=75954 | |
| mem_heap_extra_B=222 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=61 | |
| #----------- | |
| time=350510729 | |
| mem_heap_B=75930 | |
| mem_heap_extra_B=206 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n3: 75930 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n1: 72704 0x4911469: _GLOBAL__sub_I_eh_alloc.cc (eh_alloc.cc:123) | |
| n1: 72704 0x4010548: call_init.part.0 (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4010648: _dl_init (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4002038: ??? (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x5: ??? | |
| n1: 72704 0x1FFF00078D: ??? | |
| n1: 72704 0x1FFF000797: ??? | |
| n1: 72704 0x1FFF0007AA: ??? | |
| n1: 72704 0x1FFF0007B4: ??? | |
| n1: 72704 0x1FFF0007BD: ??? | |
| n1: 72704 0x1FFF0007C7: ??? | |
| n0: 72704 0x1FFF0007D0: ??? | |
| n1: 2370 0x400C551: _dl_new_object (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x400711B: _dl_map_object_from_fd (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4009D6A: _dl_map_object (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x401423D: dl_open_worker (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x4013DFD: _dl_open (in /usr/lib/ld-2.28.so) | |
| n1: 2370 0x4860158: ??? (in /usr/lib/libdl-2.28.so) | |
| n1: 2370 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x4CECF11: _dl_catch_error (in /usr/lib/libc-2.28.so) | |
| n1: 2370 0x48608BD: ??? (in /usr/lib/libdl-2.28.so) | |
| n2: 2370 0x48601F8: dlopen (in /usr/lib/libdl-2.28.so) | |
| n1: 1186 0x11ED66: dynlibs_open() (dynlibs.cc:138) | |
| n0: 1186 0x10CAD4: main (vsearch.cc:2891) | |
| n1: 1184 0x11EC93: dynlibs_open() (dynlibs.cc:120) | |
| n0: 1184 0x10CAD4: main (vsearch.cc:2891) | |
| n0: 856 in 10 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=62 | |
| #----------- | |
| time=350510761 | |
| mem_heap_B=75842 | |
| mem_heap_extra_B=190 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=63 | |
| #----------- | |
| time=350514002 | |
| mem_heap_B=75410 | |
| mem_heap_extra_B=182 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=64 | |
| #----------- | |
| time=350514031 | |
| mem_heap_B=75393 | |
| mem_heap_extra_B=159 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=65 | |
| #----------- | |
| time=350514075 | |
| mem_heap_B=75376 | |
| mem_heap_extra_B=136 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=66 | |
| #----------- | |
| time=350514111 | |
| mem_heap_B=75320 | |
| mem_heap_extra_B=120 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=67 | |
| #----------- | |
| time=350514178 | |
| mem_heap_B=74136 | |
| mem_heap_extra_B=112 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=68 | |
| #----------- | |
| time=350516362 | |
| mem_heap_B=74016 | |
| mem_heap_extra_B=96 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=69 | |
| #----------- | |
| time=350516391 | |
| mem_heap_B=73997 | |
| mem_heap_extra_B=75 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=70 | |
| #----------- | |
| time=350516435 | |
| mem_heap_B=73978 | |
| mem_heap_extra_B=54 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=71 | |
| #----------- | |
| time=350516471 | |
| mem_heap_B=73922 | |
| mem_heap_extra_B=38 | |
| mem_stacks_B=0 | |
| heap_tree=detailed | |
| n3: 73922 (heap allocation functions) malloc/new/new[], --alloc-fns, etc. | |
| n1: 72704 0x4911469: _GLOBAL__sub_I_eh_alloc.cc (eh_alloc.cc:123) | |
| n1: 72704 0x4010548: call_init.part.0 (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4010648: _dl_init (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x4002038: ??? (in /usr/lib/ld-2.28.so) | |
| n1: 72704 0x5: ??? | |
| n1: 72704 0x1FFF00078D: ??? | |
| n1: 72704 0x1FFF000797: ??? | |
| n1: 72704 0x1FFF0007AA: ??? | |
| n1: 72704 0x1FFF0007B4: ??? | |
| n1: 72704 0x1FFF0007BD: ??? | |
| n1: 72704 0x1FFF0007C7: ??? | |
| n0: 72704 0x1FFF0007D0: ??? | |
| n1: 1186 0x400C551: _dl_new_object (in /usr/lib/ld-2.28.so) | |
| n1: 1186 0x400711B: _dl_map_object_from_fd (in /usr/lib/ld-2.28.so) | |
| n1: 1186 0x4009D6A: _dl_map_object (in /usr/lib/ld-2.28.so) | |
| n1: 1186 0x401423D: dl_open_worker (in /usr/lib/ld-2.28.so) | |
| n1: 1186 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 1186 0x4013DFD: _dl_open (in /usr/lib/ld-2.28.so) | |
| n1: 1186 0x4860158: ??? (in /usr/lib/libdl-2.28.so) | |
| n1: 1186 0x4CECE75: _dl_catch_exception (in /usr/lib/libc-2.28.so) | |
| n1: 1186 0x4CECF11: _dl_catch_error (in /usr/lib/libc-2.28.so) | |
| n1: 1186 0x48608BD: ??? (in /usr/lib/libdl-2.28.so) | |
| n2: 1186 0x48601F8: dlopen (in /usr/lib/libdl-2.28.so) | |
| n1: 1186 0x11ED66: dynlibs_open() (dynlibs.cc:138) | |
| n0: 1186 0x10CAD4: main (vsearch.cc:2891) | |
| n0: 0 in 1 place, below massif's threshold (1.00%) | |
| n0: 32 in 10 places, all below massif's threshold (1.00%) | |
| #----------- | |
| snapshot=72 | |
| #----------- | |
| time=350516538 | |
| mem_heap_B=72736 | |
| mem_heap_extra_B=16 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=73 | |
| #----------- | |
| time=350520834 | |
| mem_heap_B=32 | |
| mem_heap_extra_B=8 | |
| mem_stacks_B=0 | |
| heap_tree=empty | |
| #----------- | |
| snapshot=74 | |
| #----------- | |
| time=350522929 | |
| mem_heap_B=0 | |
| mem_heap_extra_B=0 | |
| mem_stacks_B=0 | |
| heap_tree=empty |
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