Playbook for installing Galaxy w/ galaxyproject.miniconda for deps and the Galaxy venv python

galaxy.yml

---
- hosts: galaxyservers
  become: true
  become_user: root
  vars_files:
    - group_vars/secret.yml
  pre_tasks:
    - name: Install Dependencies
      apt:
        #name: ['acl', 'bzip2', 'git', 'make', 'python3-psycopg2', 'tar', 'virtualenv']
        name: ['acl', 'bzip2', 'git', 'make', 'python3-psycopg2', 'tar', 'python3-venv', 'python3-setuptools']
        cache_valid_time: 3600
    - name: Conda package cache tempdir
      tempfile:
        state: directory
        suffix: conda_pkg_cache
      register: __conda_pkg_cache_tmpdir
  post_tasks:
    - name: Remove conda package cache tempdir
      file:
        path: "{{ __conda_pkg_cache_tmpdir.path }}"
        state: absent
  roles:
    - galaxyproject.postgresql
    - role: galaxyproject.postgresql_objects
      become: true
      become_user: postgres
    # precreate user and paths so we can install conda
    - role: galaxyproject.galaxy
      galaxy_create_user: true
      galaxy_manage_paths: true
      galaxy_manage_clone: false
      galaxy_manage_download: false
      galaxy_manage_existing: false
      galaxy_manage_static_setup: false
      galaxy_manage_mutable_setup: false
      galaxy_manage_database: false
      galaxy_fetch_dependencies: false
      galaxy_build_client: false
      galaxy_manage_errordocs: false
      galaxy_backup_configfiles: false
      galaxy_manage_gravity: false
      galaxy_manage_systemd: false
      galaxy_manage_systemd_reports: false
      galaxy_manage_cleanup: false
      galaxy_systemd_mode: gravity
    # install conda as the galaxy user
    - role: galaxyproject.miniconda
      become: true
      become_user: "{{ galaxy_user.name }}"
    # install python from the galaxy conda as root
    - role: galaxyproject.miniconda
      miniconda_conda_environments:
        "{{ galaxy_root }}/python":
          copy: true
          packages:
            - python=3.9
      environment:
        # don't install into conda pkgs/ dir as root
        CONDA_PKGS_DIRS: "{{ __conda_pkg_cache_tmpdir.path }}"
    # install galaxy
    - galaxyproject.galaxy
    - galaxyproject.nginx
    - galaxyproject.gxadmin