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#!/usr/bin/env stack | |
{- stack script | |
--resolver lts-22.43 | |
--package parsec | |
-} | |
-- haskell stack (https://docs.haskellstack.org/en/stable/) script, | |
-- works if stack is on the PATH and the code.txt file is in the same directory | |
-- run with ./c14script.hs |
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# get some large EIGENSTRAT format data from | |
# https://edmond.mpdl.mpg.de/imeji/collection/OBNPDy16CfZWPhz0?q= | |
ind_file <- tempfile() | |
geno_file <- tempfile() | |
download.file( | |
"https://edmond.mpdl.mpg.de/imeji/file/d7/32/34/70-96ac-4a64-8eb2-c7d6db355d4a/0/original/77fa944dc4369018c6478dcec3f6ced6.txt?filename=Wang2019Caucasus.ind.txt", | |
destfile = ind_file | |
) | |
download.file( | |
"https://edmond.mpdl.mpg.de/imeji/file/ea/ea/02/b4-4124-43f4-a458-3cf728f8e7bc/0/original/2f35c3d890e8456ac634d18ee45e6c27.txt?filename=Wang2019Caucasus.geno.txt", |
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Sample1 [1100±30] | |
Sa2 [3200±50] | |
Sa3 [1400±20] | |
Sa4 [2000±30] | |
Sa6 [133413±70] | |
Sa7 [1300±30] | |
Sample9 [1300±50] | |
S8 [1600±30] |
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library(lambda.r) | |
FruitSet("LAS") %as% "LAS" | |
FruitSet("SAS") %as% "SAS" | |
FruitSet("OFS") %as% "OFS" | |
FruitSetList(...) %::% FruitSet... : FruitSetList | |
FruitSetList(...) %as% asFruitSetList(list(...)) | |
asFruitSetList(xs) %::% list : FruitSetList |
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# . . ... ........... . ... | |
#. ................. . .. ..... ...... ..... ....................... | |
# . .......... ... ... .......................... . | |
# ............. . ............................... | |
# ............ .. X .. X.... ................. | |
# ....... ..... .. ................... | |
# .. . ............ .... .......... | |
# . ............. . .. . | |
# ..... .......... .. . | |
# .......... ...... . .. |
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library(magrittr) | |
library(ggplot2) | |
library(rayshader) | |
#### get some point data of c14 dates from Switzerland (with c14bazAAR) #### | |
c14dates <- c14bazAAR::get_RADON() %>% | |
dplyr::filter( | |
country == "Switzerland", | |
culture == "Cortaillod" | |
) %>% |
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library(httr) | |
library(magrittr) | |
library(tidyverse) | |
clientlogin <- function(user, pw) { | |
# get login token | |
token <- httr::modify_url( | |
"http://127.0.0.1:8080/w/api.php", | |
query = list( | |
action = "login", |