Created
February 27, 2018 15:20
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Save nh13/3b750cd29d6258c2f1aecd03ea9c9f66 to your computer and use it in GitHub Desktop.
Demo Code for Callerpp: https://github.com/nh13/callerpp
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| >M1 | |
| CATAAAAGAACGTAGGTCGCCCGTCCGTAACCTGTCGGATCACCGGAAAGGACCCGTAAAGTGATAATGAT | |
| ATAAAGGCAGTCGCTCTGTAAGCTGTCGATTCACCGGAAAGATGGCGTTACCACGTAAAGTGATAATGATTAT | |
| ATCAAAGAACGTGTAGCCTGTCCGTAATCTAGCGCATTTCACACGAGACCCGCGTAATGGG | |
| CGTAAATAGGTAATGATTATCATTACATATCACAACTAGGGCCGTATTAATCATGATATCATCA | |
| GTCGCTAGAGGCATCGTGAGTCGCTTCCGTACCGCAAGGATGACGAGTCACTTAAAGTGATAAT | |
| CCGTAACCTTCATCGGATCACCGGAAAGGACCCGTAAATAGACCTGATTATCATCTACAT | |
| >M2 | |
| CATAAAAGAACGTAGGTCGCCCGTCCGTAACCTGTCGGATCACCGGAAAGGACCCGTAAAGTGATAATGAT | |
| ATAAAGGCAGTCGCTCTGTAAGCTGTCGATTCACCGGAAAGATGGCGTTACCACGTAAAGTGATAATGATTAT | |
| ATCAAAGAACGTGTAGCCTGTCCGTAATCTAGCGCATTTCACACGAGACCCGCGTAATGGG | |
| CGTAAATAGGTAATGATTATCATTACATATCACAACTAGGGCCGTATTAATCATGATATCATCA | |
| GTCGCTAGAGGCATCGTGAGTCGCTTCCGTACCGCAAGGATGACGAGTCACTTAAAGTGATAAT | |
| CCGTAACCTTCATCGGATCACCGGAAAGGACCCGTAAATAGACCTGATTATCATCTACAT | |
| >M3 | |
| CATAAAAGAACGTAGGTCGCCCGTCCGTAACCTGTCGGATCACCGGAAAGGACCCGTAAAGTGATAATGAT | |
| CATAAAAGAACGTAGGTCGCCCGTCCGTAACCTGTCGGATCACCGGAAAGGACCCGTAAAGTGAT | |
| CATAAAAGAACGTAGGTCGCCCGTCCGTAACCTGTCGGATCACCGGAAAGGACCCGTAAAGT | |
| CATAAAAGAACGTAGGTCGCCCGTCCGTAACCTGTCGGATCACCGGAAGACCCGTAAAGT |
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| #!/bin/bash | |
| set -exuo pipefail | |
| function demo_command() | |
| { local command=$1; | |
| clear | |
| echo -n "\$ " | |
| echo -n "$command" | pv -qL 15 | |
| sleep 1 | |
| echo ""; | |
| eval $command | |
| echo -n "\$ " | |
| sleep 3 | |
| } | |
| clear | |
| echo -n "\$ " | |
| sleep 10 | |
| demo_command "make" | |
| demo_command "./bin/callerpp -h" | |
| demo_command "cat input.fasta" | |
| demo_command "cat input.fasta | ./bin/callerpp" | |
| demo_command "cat input.fasta | ./bin/callerpp -m" | |
| demo_command "echo \"Enjoy!\"" |
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