Created
September 30, 2019 20:32
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behavior only NWB file dev
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from allensdk.internal.api.mtrain_api import MtrainApi | |
from allensdk.internal.api.behavior_lims_api import BehaviorLimsApi | |
from allensdk.brain_observatory.behavior.behavior_session import BehaviorSession | |
from allensdk.brain_observatory.behavior.behavior_api.behavior_nwb_api import BehaviorNwbApi | |
bl_api = BehaviorLimsApi() | |
m_api = MtrainApi() | |
# Get a session: | |
labtracks_id_list = m_api.get_subjects() | |
foraging_id = m_api.get_behavior_training_df(LabTracks_ID=463810)['behavior_session_uuid'].values[0] | |
behavior_session_id = bl_api.foraging_id_to_behavior_session_id(foraging_id) | |
session = BehaviorSession.from_lims(behavior_session_id) | |
# Write a file: | |
BehaviorNwbApi('tmp.nwb').save(session) |
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