Restoring TensorFlow Models

_NOTICE.md

This gist has been superceded by Meta Graph functionality that has since been added to tensorflow core.

See: https://www.tensorflow.org/versions/master/api_docs/python/state_ops.html#exporting-and-importing-meta-graphs

The code remains posted for archival purposes only.

tf_restore_graph.py

"""
By default, TensorFlow's GraphDef only saves the graph architecture
(not the parameter values), while the Saver class only writes parameter
values to each checkpoint.

This code allows combining data from the GraphDef and a checkpoint file
to restore a functioning model.

Sample usage:
```
import tensorflow as tf
from tf_restore_graph import restore_graph
from tensorflow.python.summary.event_accumulator import EventAccumulator
sess = tf.InteractiveSession()
events = EventAccumulator('path-to-tfevents-file')
events.Reload()
(x,y), saver = restore_graph(
    events.Graph(),
    tf.train.get_checkpoint_state('checkpoint').model_checkpoint_path,
    return_elements=['x', 'y']
)
print(sess.run(y, feed_dict={x:1.0}))
```
"""

import tensorflow as tf
from tensorflow.python import ops
import random

class RestoredVariable(tf.Variable):
    """
    A variable restored from disk
    """
    def __init__(self, name, trainable=True, collections=None, graph=None):
        if graph is None:
            graph = tf.get_default_graph()

        if collections is None:
            collections = [ops.GraphKeys.VARIABLES]
        if trainable and ops.GraphKeys.TRAINABLE_VARIABLES not in collections:
            # pylint: disable=g-no-augmented-assignment
            #
            # Pylint wants us to write collections += [...TRAINABLE_VARIABLES] which
            # is not the same (it modifies the list in place.)  Here, we only want to
            # modify the value of the variable, not the list.
            collections = collections + [ops.GraphKeys.TRAINABLE_VARIABLES]
            # pylint: enable=g-no-augmented-assignment
        
        self._variable = graph.as_graph_element(name).outputs[0]
        self._snapshot = graph.as_graph_element(name + '/read').outputs[0]
        self._initializer_op = graph.as_graph_element(name + '/Assign')
        
        i_name = name + '/Initializer/'
        keys = [k for k in graph._nodes_by_name.keys() if k.startswith(i_name) and '/' not in k[len(i_name):] ]
        if len(keys) != 1:
            raise ValueError('Could not find initializer for variable', keys)
        
        self._initial_value = None #initial_value node

        for key in collections:
            graph.add_to_collection(key, self)
        self._save_slice_info = None
        
def restore_graph(graph_def, save_path=None,
                  saver_def=None,
                  input_map=None, return_elements=None, op_dict=None,
                  trainable=True, collections=None,
                 ):
    """
    Restore a graph from a GraphDef
    
    Args:
      graph_def: a GraphDef instance, representing the model architecture
      save_path: path where parameter values were saved
      saver_def: SaverDef for restoring the saver
      input_map, return_elements, op_dict: passed to tf.import_graph_def
      trainable: whether the restored variables should be marked as trainable
      collections: which collections to add the restored variables to
      
    Returns: (graph_elements, saver)
      graph_elements: The return value of tf.import_graph_def
      saver: The saver can be used to load further checkpoints
    """
    res = tf.import_graph_def(graph_def, name='', input_map=input_map, return_elements=return_elements, op_dict=op_dict)
    restored_vars = []
    for node in graph_def.node:
        if node.op == 'Variable':
            restored_vars.append(RestoredVariable(node.name, trainable=trainable, collections=collections))
    
    if saver_def is not None:
        saver = tf.train.Saver(saver_def, var_list=restored_vars)
    else:
        # Saver names must be unique, but we can't reuse the old saver variables without the saver_def
        # So we generate a random name, and hope the variable ordering and packing is deterministic and
        # unchanged since the checkpoint was saved
        saver = tf.train.Saver(var_list=restored_vars,
                               name='restored-' + ('%016x' % random.randrange(16**16)))
    
    if save_path is not None:
        saver.restore(tf.get_default_session(), save_path)
    
    return res, saver

Hi, thanks for the code. I am trying to retrieve variables of using a simple code. I created two python scripts ,save_model.py and restore_model.py in the same folder to save and retrieve the model respectively. I am able to save the model but unable to retrieve it. Could you please help me with it. Thanks.
save_model.py

import tensorflow as tf
v1 = tf.Variable(1.32, name="v1")
v2 = tf.Variable(1.33, name="v2")

init = tf.initialize_all_variables()

saver = tf.train.Saver()

with tf.Session() as sess:
 sess.run(init)
 print v2.eval(sess)
 save_path="model.ckpt"
 saver.save(sess,save_path)
 saver.restore(sess, save_path)
 print("Model restored.")

restore.py

import tensorflow as tf
v1 = tf.Variable(0, name="v1")
v2 = tf.Variable(0, name="v2")
saver = tf.train.Saver()
init = tf.initialize_all_variables()
with tf.Session() as sess:
  save_path="model.ckpt"
  saver.restore(sess, save_path)
  print("Model restored.")

@Vikramank
(I only saw this now because for some reason, I'm not subscribed to comments on my own gist)
Your problem is that restore.py initializes the variables to integer 0, not float 0.0. This makes them incapable of storing floats, so you can't load your checkpoint.

Hallo, many thanks for this!
I'm testing your script but always get an assertion error on events.Graph() !!
when using a normal tf.import_graph_def(graph_def, name='') causes raising the error "Could not find initializer for variable"
any ideas why?

@zaatko

It's not immediately clear to me what the issue is.

However, if you have a recent enough version of tensorflow, could you try out the API described here: https://www.tensorflow.org/versions/r0.9/how_tos/meta_graph/index.html

I haven't used it myself, but it does seem that graph restoration has finally made it into the official release.

It seems the way to go is rather the "freeze graph" approach, which seems available from 0.10.0.

---

I found the script trying to do the same actually (converting a training graph to a constant one). Several models shared for examples and tutorials (e.g. Inception's ZIP file) are binary of constants in the graph, and it is the only way (for now) to load them conveniently with the C++ API, to date.