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@njahn82
Created June 17, 2019 14:58
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kb wos second dataset
---
title: "Dataset two"
author: "Najko"
date: '2019-06-17'
output:
html_document:
keep_md: yes
---
```r
library(tidyverse)
library(rcrossref)
library(roadoi)
```
### Load data
```r
table_2 <- readr::read_csv("199_with_valid_non_duplicated_DOI_WOS_missing_from_Unpaywall_Crossref.csv")
```
### Check, which registration agency minted the DOI
```r
cr_agency <- purrr::map(table_2$DOI, rcrossref::cr_agency)
cr_agency_df <- tibble(doi = purrr::map_chr(cr_agency, c("DOI")),
agency = purrr::map_df(cr_agency, c("agency"))
)
cr_agency_df <- tibble(doi = cr_agency_df$doi,
doi_agency_id = cr_agency_df$agency$id,
doi_agency_label = cr_agency_df$agency$label)
cr_agency_df %>%
count(doi_agency_label)
#> # A tibble: 2 x 2
#> doi_agency_label n
#> <chr> <int>
#> 1 Crossref 195
#> 2 KISTI 4
```
### Check Crossref-registered DOIs if the publisher provided metadata to Crossref
```r
cr_works_df <- cr_agency_df %>%
filter(doi_agency_label == "Crossref") %>%
.$doi %>%
rcrossref::cr_works()
cr_works_df$data %>%
filter(!is.na(doi))
#> # A tibble: 195 x 34
#> alternative.id container.title created deposited published.online doi
#> <chr> <chr> <chr> <chr> <chr> <chr>
#> 1 su8040325 Sustainability 2016-0… 2018-03-… 2016-03-31 10.3…
#> 2 <NA> Journal of Env… 2011-0… 2019-06-… <NA> 10.3…
#> 3 <NA> World Journal … 2017-1… 2017-11-… <NA> 10.4…
#> 4 <NA> Rendiconti Lin… 2011-0… 2018-03-… <NA> 10.4…
#> 5 <NA> Folia Phoniatr… 2017-0… 2017-10-… 2017-06-29 10.1…
#> 6 <NA> Current Issues… 2018-0… 2018-10-… <NA> 10.1…
#> 7 10.3892/ol.20… Oncology Lette… 2016-0… 2018-01-… 2016-04-28 10.3…
#> 8 <NA> Dental Materia… 2016-0… 2017-06-… <NA> 10.4…
#> 9 <NA> Annals of Math… 2011-0… 2019-06-… 2011-07-01 10.4…
#> 10 <NA> Türkiye Fiziks… 2018-0… 2018-02-… 2016-12-19 10.5…
#> # … with 185 more rows, and 28 more variables: indexed <chr>, issn <chr>,
#> # issue <chr>, issued <chr>, member <chr>, page <chr>, prefix <chr>,
#> # publisher <chr>, reference.count <chr>, score <chr>, source <chr>,
#> # title <chr>, type <chr>, url <chr>, volume <chr>, author <list>,
#> # link <list>, license <list>, reference <list>, published.print <chr>,
#> # subject <chr>, update.policy <chr>, abstract <chr>, assertion <list>,
#> # archive <chr>, subtitle <chr>, isbn <chr>, funder <list>
```
### Check Unpaywall
```r
upywall <- cr_agency_df %>%
filter(doi_agency_label == "Crossref") %>%
.$doi %>%
roadoi::oadoi_fetch(email = "najko.jahn@gmail.com")
upywall
#> # A tibble: 195 x 16
#> doi best_oa_location oa_locations data_standard is_oa genre
#> <chr> <list> <list> <int> <lgl> <chr>
#> 1 10.3… <tibble [1 × 9]> <tibble [3 … 2 TRUE jour…
#> 2 10.3… <tibble [0 × 0]> <tibble [0 … 2 FALSE jour…
#> 3 10.4… <tibble [1 × 11… <tibble [2 … 2 TRUE jour…
#> 4 10.4… <tibble [1 × 8]> <tibble [1 … 2 TRUE jour…
#> 5 10.1… <tibble [0 × 0]> <tibble [0 … 2 FALSE jour…
#> 6 10.1… <tibble [1 × 9]> <tibble [2 … 2 TRUE jour…
#> 7 10.3… <tibble [1 × 8]> <tibble [3 … 2 TRUE jour…
#> 8 10.4… <tibble [1 × 8]> <tibble [1 … 2 TRUE jour…
#> 9 10.4… <tibble [1 × 8]> <tibble [3 … 2 TRUE jour…
#> 10 10.5… <tibble [1 × 7]> <tibble [1 … 2 TRUE jour…
#> # … with 185 more rows, and 10 more variables: journal_is_oa <lgl>,
#> # journal_is_in_doaj <lgl>, journal_issns <chr>, journal_name <chr>,
#> # publisher <chr>, title <chr>, year <chr>, updated <chr>,
#> # non_compliant <list>, authors <list>
```
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