Created
November 11, 2013 21:21
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Error log from installing `pymc` on Mac OS 10.9
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| Last login: Mon Nov 11 08:29:55 on ttys009 | |
| Olgas-MacBook-Pro-1378:~ olga$ pip install pymc | |
| Downloading/unpacking pymc | |
| Downloading pymc-2.3.tar.gz (13.1MB): 13.1MB downloaded | |
| Running setup.py egg_info for package pymc | |
| build_src | |
| building extension "pymc.flib" sources | |
| f2py options: ['skip:ppnd7'] | |
| f2py:> build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c | |
| IOError: [Errno 2] No such file or directory: 'skip:ppnd7'. Skipping file "skip:ppnd7". | |
| updatevars:gradlike: attempt to change 'dimension(nx)' to 'dimension(na)'. Ignoring. | |
| updatevars:gradlike: attempt to change 'dimension(nx)' to 'dimension(nb)'. Ignoring. | |
| updatevars:gradlike: attempt to change 'dimension (nmu)' to 'dimension(nmu)'. Ignoring. | |
| updatevars:gradlike: attempt to change 'dimension (na)' to 'dimension(na)'. Ignoring. | |
| rmbadname1: Replacing "index" with "index_bn". | |
| updatevars: "character curterms(20)*24" is mapped to "character curterms(20,24)" | |
| updatevars: "character septerms(20)*24" is mapped to "character septerms(20,24)" | |
| updatevars: "character tokens(maxtok)*(*)" is mapped to "character tokens(maxtok,(*))" | |
| rmbadname1: Replacing "index" with "index_bn". | |
| rmbadname1: Replacing "len" with "len_bn". | |
| sortvarnames: failed to compute dependencies because of cyclic dependencies between x, nx | |
| sortvarnames: failed to compute dependencies because of cyclic dependencies between w, x, nx | |
| sortvarnames: failed to compute dependencies because of cyclic dependencies between n, nx, bin0, delta, x, d | |
| "object of type 'builtin_function_or_method' has no len()" in evaluating 'len(ord)' (available names: []) | |
| Reading fortran codes... | |
| Reading file 'pymc/flib.f' (format:fix,strict) | |
| Reading file 'pymc/histogram.f' (format:fix,strict) | |
| Reading file 'pymc/flib_blas.f' (format:fix,strict) | |
| Reading file 'pymc/blas_wrap.f' (format:fix,strict) | |
| Reading file 'pymc/math.f' (format:fix,strict) | |
| Reading file 'pymc/gibbsit.f' (format:fix,strict) | |
| Line #1125 in pymc/gibbsit.f:" DOUBLE PRECISION INTENT(CACHE,HIDE), DIMENSION(2*ITERACNT) :: WORK" | |
| updatevars: attempt to change the type of "work" ("integer") to "double precision". Ignoring. | |
| Post-processing... | |
| Block: flib | |
| Block: symmetrize | |
| Block: logsum | |
| Block: logsum_cpx | |
| Block: combinationln | |
| {'attrspec': ['intent(hide)']} | |
| In: :flib:pymc/flib.f:expand_triangular | |
| vars2fortran: No typespec for argument "nf". | |
| {'attrspec': ['intent(hide)']} | |
| In: :flib:pymc/flib.f:expand_triangular | |
| vars2fortran: No typespec for argument "n". | |
| Block: expand_triangular | |
| Block: mod_to_circle | |
| Block: standardize | |
| Block: gammln | |
| Block: mvgammln | |
| Block: factrl | |
| Block: factln | |
| Block: normcdf | |
| Block: sn_like | |
| Block: rskewnorm | |
| Block: uniform_like | |
| Block: uniform_grad_x | |
| Block: uniform_grad_l | |
| Block: uniform_grad_u | |
| Block: duniform_like | |
| Block: exponweib | |
| Block: exponweib_gx | |
| Block: exponweib_gl | |
| Block: exponweib_gk | |
| Block: exponweib_ga | |
| Block: exponweib_gs | |
| Block: exponweib_ppf | |
| Block: constrain | |
| Block: poisson | |
| Block: poisson_gmu | |
| Block: trpoisson | |
| Block: trpoisson_gmu | |
| Block: t | |
| Block: t_grad_x | |
| Block: t_grad_nu | |
| Block: chi2_grad_nu | |
| Block: nct | |
| Block: multinomial | |
| Block: weibull | |
| Block: weibull_gx | |
| Block: weibull_ga | |
| Block: weibull_gb | |
| Block: logistic | |
| Block: normal | |
| Block: normal_grad_tau | |
| Block: normal_grad_x | |
| Block: normal_grad_mu | |
| Block: hnormal | |
| Block: hnormal_gradx | |
| Block: hnormal_gradtau | |
| Block: lognormal | |
| Block: lognormal_gradx | |
| Block: lognormal_gradmu | |
| Block: lognormal_gradtau | |
| Block: arlognormal | |
| Block: gev | |
| Block: gev_ppf | |
| Block: gamma | |
| Block: gamma_grad_x | |
| Block: gamma_grad_alpha | |
| Block: gamma_grad_beta | |
| Block: igamma | |
| Block: igamma_grad_x | |
| Block: igamma_grad_alpha | |
| Block: igamma_grad_beta | |
| Block: hyperg | |
| Block: geometric | |
| Block: geometric_gp | |
| Block: dirichlet | |
| Block: cauchy | |
| Block: cauchy_grad_x | |
| Block: cauchy_grad_a | |
| Block: cauchy_grad_b | |
| Block: negbin | |
| Block: negbin2 | |
| Block: negbin2_gmu | |
| Block: negbin2_ga | |
| Block: binomial | |
| Block: binomial_gp | |
| Block: bernoulli | |
| Block: bern_grad_p | |
| Block: beta_like | |
| Block: beta_grad_x | |
| Block: beta_grad_a | |
| Block: beta_grad_b | |
| Block: betabin_like | |
| Block: betabin_ga | |
| Block: betabin_gb | |
| Block: mvhyperg | |
| Block: dirmultinom | |
| Block: wishart | |
| Block: trace | |
| Block: gamfun | |
| Block: gammds | |
| Block: psi | |
| Block: gser | |
| Block: gcf | |
| Block: gammq | |
| Block: trans | |
| Block: matmult | |
| Block: dtrm | |
| Block: elgs | |
| Block: bico | |
| Block: chol | |
| Block: hermpoly | |
| Block: set_uniform | |
| Block: categorical | |
| Block: rcat | |
| Block: logit | |
| Block: invlogit | |
| Block: stukel_logit | |
| Block: stukel_invlogit | |
| Block: vonmises | |
| Block: pareto | |
| Block: truncated_pareto | |
| Block: fixed_binsize | |
| Block: weighted_fixed_binsize | |
| Block: fixed_binsize_nd | |
| {'attrspec': ['dimension(n)']} | |
| In: :flib:pymc/histogram.f:qsorti | |
| vars2fortran: No typespec for argument "ord". | |
| Block: qsorti | |
| Block: checksymm | |
| Block: chol_mvnorm | |
| Block: cov_mvnorm | |
| Block: prec_mvnorm | |
| Block: blas_wishart | |
| Block: blas_wishart_cov | |
| {'attrspec': ['intent(hide)']} | |
| In: :flib:pymc/blas_wrap.f:dcopy_wrap | |
| vars2fortran: No typespec for argument "nx". | |
| Block: dcopy_wrap | |
| Block: dtrmm_wrap | |
| Block: dtrsm_wrap | |
| Block: dpotrf_wrap | |
| Block: dchdc_wrap | |
| Block: dpotrs_wrap | |
| Block: ppnd16 | |
| Block: calerf | |
| Block: derf | |
| Block: derfc | |
| Block: derfcx | |
| Block: gibbsit | |
| Block: matinput | |
| Block: vecinput | |
| Block: oneparse | |
| Block: gibbmain | |
| Block: empquant | |
| Block: dichot | |
| Block: thin | |
| Block: mctest | |
| Block: indtest | |
| Block: mcest | |
| Block: ppnd7 | |
| Block: ssort | |
| Post-processing (stage 2)... | |
| Building modules... | |
| Building module "flib"... | |
| Constructing wrapper function "symmetrize"... | |
| symmetrize(c,[cmin,cmax]) | |
| Constructing wrapper function "logsum"... | |
| s = logsum(x) | |
| Constructing wrapper function "logsum_cpx"... | |
| s = logsum_cpx(x) | |
| Creating wrapper for Fortran function "combinationln"("combinationln")... | |
| Constructing wrapper function "combinationln"... | |
| combinationln = combinationln(n,k) | |
| Constructing wrapper function "expand_triangular"... | |
| t = expand_triangular(d,f) | |
| Constructing wrapper function "mod_to_circle"... | |
| mx = mod_to_circle(x,u,l) | |
| Constructing wrapper function "standardize"... | |
| z = standardize(x,loc,scale) | |
| Creating wrapper for Fortran function "gammln"("gammln")... | |
| Constructing wrapper function "gammln"... | |
| gammln = gammln(xx) | |
| Creating wrapper for Fortran function "mvgammln"("mvgammln")... | |
| Constructing wrapper function "mvgammln"... | |
| mvgammln = mvgammln(x,k) | |
| Creating wrapper for Fortran function "factrl"("factrl")... | |
| Constructing wrapper function "factrl"... | |
| factrl = factrl(n) | |
| Creating wrapper for Fortran function "factln"("factln")... | |
| Constructing wrapper function "factln"... | |
| factln = factln(n) | |
| Constructing wrapper function "normcdf"... | |
| normcdf(x) | |
| Constructing wrapper function "sn_like"... | |
| like = sn_like(x,mu,tau,alph) | |
| Constructing wrapper function "rskewnorm"... | |
| x = rskewnorm(nx,mu,tau,alph,rn) | |
| Constructing wrapper function "uniform_like"... | |
| like = uniform_like(x,lower,upper) | |
| Constructing wrapper function "uniform_grad_x"... | |
| gradxlike = uniform_grad_x(x,lower,upper) | |
| Constructing wrapper function "uniform_grad_l"... | |
| gradllike = uniform_grad_l(x,lower,upper) | |
| Constructing wrapper function "uniform_grad_u"... | |
| gradulike = uniform_grad_u(x,lower,upper) | |
| Constructing wrapper function "duniform_like"... | |
| like = duniform_like(x,lower,upper) | |
| Constructing wrapper function "exponweib"... | |
| like = exponweib(x,a,c,loc,scale) | |
| Constructing wrapper function "exponweib_gx"... | |
| gradlike = exponweib_gx(x,alpha,k,loc,scale) | |
| Constructing wrapper function "exponweib_gl"... | |
| gradlike = exponweib_gl(x,alpha,k,loc,scale) | |
| Constructing wrapper function "exponweib_gk"... | |
| gradlike = exponweib_gk(x,alpha,k,loc,scale) | |
| Constructing wrapper function "exponweib_ga"... | |
| gradlike = exponweib_ga(x,alpha,k,loc,scale,[nk]) | |
| Constructing wrapper function "exponweib_gs"... | |
| gradlike = exponweib_gs(x,alpha,k,loc,scale) | |
| Constructing wrapper function "exponweib_ppf"... | |
| ppf = exponweib_ppf(q,a,c) | |
| Constructing wrapper function "constrain"... | |
| pass = constrain(x,a,b,allow_equal) | |
| Constructing wrapper function "poisson"... | |
| like = poisson(x,mu) | |
| Constructing wrapper function "poisson_gmu"... | |
| gradlike = poisson_gmu(x,mu) | |
| Constructing wrapper function "trpoisson"... | |
| like = trpoisson(x,mu,k) | |
| Constructing wrapper function "trpoisson_gmu"... | |
| gradlike = trpoisson_gmu(x,mu,k) | |
| Constructing wrapper function "t"... | |
| like = t(x,nu) | |
| Constructing wrapper function "t_grad_x"... | |
| gradlikex = t_grad_x(x,nu) | |
| Constructing wrapper function "t_grad_nu"... | |
| gradlikenu = t_grad_nu(x,nu) | |
| Constructing wrapper function "chi2_grad_nu"... | |
| gradlikenu = chi2_grad_nu(x,nu) | |
| Constructing wrapper function "nct"... | |
| like = nct(x,mu,lam,nu) | |
| Constructing wrapper function "multinomial"... | |
| like = multinomial(x,n,p) | |
| Constructing wrapper function "weibull"... | |
| like = weibull(x,alpha,beta) | |
| Constructing wrapper function "weibull_gx"... | |
| gradlike = weibull_gx(x,alpha,beta) | |
| Constructing wrapper function "weibull_ga"... | |
| gradlike = weibull_ga(x,alpha,beta) | |
| Constructing wrapper function "weibull_gb"... | |
| gradlike = weibull_gb(x,alpha,beta) | |
| Constructing wrapper function "logistic"... | |
| like = logistic(x,mu,tau) | |
| Constructing wrapper function "normal"... | |
| like = normal(x,mu,tau) | |
| Constructing wrapper function "normal_grad_tau"... | |
| grad_tau_like = normal_grad_tau(x,mu,tau) | |
| Constructing wrapper function "normal_grad_x"... | |
| grad_x_like = normal_grad_x(x,mu,tau) | |
| Constructing wrapper function "normal_grad_mu"... | |
| gradmulike = normal_grad_mu(x,mu,tau) | |
| Constructing wrapper function "hnormal"... | |
| like = hnormal(x,tau) | |
| Constructing wrapper function "hnormal_gradx"... | |
| gradlike = hnormal_gradx(x,tau) | |
| Constructing wrapper function "hnormal_gradtau"... | |
| gradlike = hnormal_gradtau(x,tau) | |
| Constructing wrapper function "lognormal"... | |
| like = lognormal(x,mu,tau) | |
| Constructing wrapper function "lognormal_gradx"... | |
| gradlike = lognormal_gradx(x,mu,tau) | |
| Constructing wrapper function "lognormal_gradmu"... | |
| gradlike = lognormal_gradmu(x,mu,tau) | |
| Constructing wrapper function "lognormal_gradtau"... | |
| gradlike = lognormal_gradtau(x,mu,tau) | |
| Constructing wrapper function "arlognormal"... | |
| like = arlognormal(x,mu,sigma,rho,beta) | |
| Constructing wrapper function "gev"... | |
| like = gev(x,xi,mu,sigma) | |
| Constructing wrapper function "gev_ppf"... | |
| ppf = gev_ppf(q,xi) | |
| Constructing wrapper function "gamma"... | |
| like = gamma(x,alpha,beta) | |
| Constructing wrapper function "gamma_grad_x"... | |
| gradxlike = gamma_grad_x(x,alpha,beta) | |
| Constructing wrapper function "gamma_grad_alpha"... | |
| gradalphalike = gamma_grad_alpha(x,alpha,beta) | |
| Constructing wrapper function "gamma_grad_beta"... | |
| gradbetalike = gamma_grad_beta(x,alpha,beta) | |
| Constructing wrapper function "igamma"... | |
| like = igamma(x,alpha,beta) | |
| Constructing wrapper function "igamma_grad_x"... | |
| gradxlike = igamma_grad_x(x,alpha,beta) | |
| Constructing wrapper function "igamma_grad_alpha"... | |
| gradalphalike = igamma_grad_alpha(x,alpha,beta) | |
| Constructing wrapper function "igamma_grad_beta"... | |
| gradbetalike = igamma_grad_beta(x,alpha,beta) | |
| Constructing wrapper function "hyperg"... | |
| like = hyperg(x,draws,success,total) | |
| Constructing wrapper function "geometric"... | |
| like = geometric(x,p) | |
| Constructing wrapper function "geometric_gp"... | |
| gradlike = geometric_gp(x,p) | |
| Constructing wrapper function "dirichlet"... | |
| like = dirichlet(x,theta) | |
| Constructing wrapper function "cauchy"... | |
| like = cauchy(x,alpha,beta) | |
| Constructing wrapper function "cauchy_grad_x"... | |
| gradlike = cauchy_grad_x(x,alpha,beta) | |
| Constructing wrapper function "cauchy_grad_a"... | |
| gradlike = cauchy_grad_a(x,alpha,beta) | |
| Constructing wrapper function "cauchy_grad_b"... | |
| gradlike = cauchy_grad_b(x,alpha,beta) | |
| Constructing wrapper function "negbin"... | |
| like = negbin(x,r,p) | |
| Constructing wrapper function "negbin2"... | |
| like = negbin2(x,mu,a) | |
| Constructing wrapper function "negbin2_gmu"... | |
| gradlike = negbin2_gmu(x,mu,alpha) | |
| Constructing wrapper function "negbin2_ga"... | |
| gradlike = negbin2_ga(x,mu,alpha) | |
| Constructing wrapper function "binomial"... | |
| like = binomial(x,n,p) | |
| Constructing wrapper function "binomial_gp"... | |
| gradlike = binomial_gp(x,n,p) | |
| Constructing wrapper function "bernoulli"... | |
| like = bernoulli(x,p) | |
| Constructing wrapper function "bern_grad_p"... | |
| grad_like = bern_grad_p(x,p) | |
| Constructing wrapper function "beta_like"... | |
| like = beta_like(x,alpha,beta) | |
| Constructing wrapper function "beta_grad_x"... | |
| gradlikex = beta_grad_x(x,alpha,beta) | |
| Constructing wrapper function "beta_grad_a"... | |
| gradlikea = beta_grad_a(x,alpha,beta) | |
| Constructing wrapper function "beta_grad_b"... | |
| gradlikeb = beta_grad_b(x,alpha,beta) | |
| Constructing wrapper function "betabin_like"... | |
| like = betabin_like(x,alpha,beta,n) | |
| Constructing wrapper function "betabin_ga"... | |
| gradlike = betabin_ga(x,alpha,beta,n) | |
| Constructing wrapper function "betabin_gb"... | |
| gradlike = betabin_gb(x,alpha,beta,n) | |
| Constructing wrapper function "mvhyperg"... | |
| like = mvhyperg(x,color) | |
| Constructing wrapper function "dirmultinom"... | |
| like = dirmultinom(x,theta) | |
| Constructing wrapper function "wishart"... | |
| like = wishart(x,n,sigma) | |
| Constructing wrapper function "trace"... | |
| trace(mat,tr,[k]) | |
| Constructing wrapper function "gamfun"... | |
| gx = gamfun(xx) | |
| Creating wrapper for Fortran function "gammds"("gammds")... | |
| Constructing wrapper function "gammds"... | |
| gammds = gammds(y,p,ifault) | |
| Creating wrapper for Fortran function "psi"("psi")... | |
| Constructing wrapper function "psi"... | |
| psi = psi(x) | |
| Constructing wrapper function "gser"... | |
| gser(gamser,a,x,gln) | |
| Constructing wrapper function "gcf"... | |
| gcf(gammcf,a,x,gln) | |
| Creating wrapper for Fortran function "gammq"("gammq")... | |
| Constructing wrapper function "gammq"... | |
| gammq = gammq(a,x) | |
| Constructing wrapper function "trans"... | |
| tmat = trans(mat) | |
| Constructing wrapper function "matmult"... | |
| prod = matmult(mat1,mat2) | |
| Constructing wrapper function "dtrm"... | |
| d = dtrm(a) | |
| Constructing wrapper function "elgs"... | |
| elgs(a,indx,[n]) | |
| Creating wrapper for Fortran function "bico"("bico")... | |
| Constructing wrapper function "bico"... | |
| bico = bico(n,k) | |
| Constructing wrapper function "chol"... | |
| c = chol(a,[n]) | |
| Constructing wrapper function "hermpoly"... | |
| cx = hermpoly(n,x) | |
| Constructing wrapper function "set_uniform"... | |
| set_uniform(seed1,seed2) | |
| Constructing wrapper function "categorical"... | |
| like = categorical(x,p) | |
| Constructing wrapper function "rcat"... | |
| s = rcat(p,rands) | |
| Constructing wrapper function "logit"... | |
| ltheta = logit(theta) | |
| Constructing wrapper function "invlogit"... | |
| theta = invlogit(ltheta) | |
| Constructing wrapper function "stukel_logit"... | |
| ltheta = stukel_logit(theta,a1,a2,[overwrite_theta]) | |
| Constructing wrapper function "stukel_invlogit"... | |
| theta = stukel_invlogit(ltheta,a1,a2,[overwrite_ltheta]) | |
| Constructing wrapper function "vonmises"... | |
| like = vonmises(x,mu,kappa) | |
| Constructing wrapper function "pareto"... | |
| like = pareto(x,alpha,m) | |
| Constructing wrapper function "truncated_pareto"... | |
| like = truncated_pareto(x,alpha,m,b) | |
| Constructing wrapper function "fixed_binsize"... | |
| h = fixed_binsize(x,bin0,delta,n) | |
| Constructing wrapper function "weighted_fixed_binsize"... | |
| h = weighted_fixed_binsize(x,w,bin0,delta,n) | |
| Constructing wrapper function "fixed_binsize_nd"... | |
| count = fixed_binsize_nd(x,bin0,delta,n,nc) | |
| Constructing wrapper function "qsorti"... | |
| qsorti(ord,a,[n]) | |
| Constructing wrapper function "checksymm"... | |
| cs = checksymm(x) | |
| Constructing wrapper function "chol_mvnorm"... | |
| like = chol_mvnorm(x,mu,sig,[overwrite_x,overwrite_mu]) | |
| Constructing wrapper function "cov_mvnorm"... | |
| like = cov_mvnorm(x,mu,c,[overwrite_x,overwrite_mu,overwrite_c]) | |
| Constructing wrapper function "prec_mvnorm"... | |
| like = prec_mvnorm(x,mu,tau,[overwrite_x,overwrite_mu,overwrite_tau]) | |
| Constructing wrapper function "blas_wishart"... | |
| like = blas_wishart(x,n,t,[overwrite_x,overwrite_t]) | |
| Constructing wrapper function "blas_wishart_cov"... | |
| like = blas_wishart_cov(x,n,v,[overwrite_x,overwrite_v]) | |
| Constructing wrapper function "dcopy_wrap"... | |
| dcopy_wrap(x,y) | |
| Constructing wrapper function "dtrmm_wrap"... | |
| dtrmm_wrap(a,b,side,transa,uplo,alpha) | |
| Constructing wrapper function "dtrsm_wrap"... | |
| dtrsm_wrap(a,b,side,transa,uplo,alpha) | |
| Constructing wrapper function "dpotrf_wrap"... | |
| info = dpotrf_wrap(a) | |
| Constructing wrapper function "dchdc_wrap"... | |
| piv,info = dchdc_wrap(a) | |
| Constructing wrapper function "dpotrs_wrap"... | |
| info = dpotrs_wrap(chol_fac,b,[uplo]) | |
| Creating wrapper for Fortran function "ppnd16"("ppnd16")... | |
| Constructing wrapper function "ppnd16"... | |
| ppnd16 = ppnd16(p,ifault) | |
| Constructing wrapper function "calerf"... | |
| calerf(arg,result,jint) | |
| Creating wrapper for Fortran function "derf"("derf")... | |
| Constructing wrapper function "derf"... | |
| derf = derf(x) | |
| Creating wrapper for Fortran function "derfc"("derfc")... | |
| Constructing wrapper function "derfc"... | |
| derfc = derfc(x) | |
| Creating wrapper for Fortran function "derfcx"("derfcx")... | |
| Constructing wrapper function "derfcx"... | |
| derfcx = derfcx(x) | |
| Constructing wrapper function "matinput"... | |
| matinput(uid,matout,rowused,colused,r15,[rowmax,colmax]) | |
| Constructing wrapper function "vecinput"... | |
| vecinput(uid,vecout,vecused,r15,[vecmax]) | |
| Constructing wrapper function "oneparse"... | |
| getarrdims:warning: assumed shape array, using 0 instead of '(*)' | |
| oneparse(instring,delimit,tokens,tokcnt,r15,[maxtok]) | |
| Constructing wrapper function "gibbmain"... | |
| nmin,kthin,nburn,nprec,kmind = gibbmain(original,q,r,s,epsilon) | |
| Creating wrapper for Fortran function "empquant"("empquant")... | |
| Constructing wrapper function "empquant"... | |
| getarrdims:warning: assumed shape array, using 0 instead of '*' | |
| empquant = empquant(data,q,work,[iteracnt]) | |
| Constructing wrapper function "dichot"... | |
| dichot(data,cutpt,zt,[iteracnt]) | |
| Constructing wrapper function "thin"... | |
| thin(series,kthin,result,thincnt,[iteracnt]) | |
| Constructing wrapper function "mctest"... | |
| mctest(data,g2,bic,[datacnt]) | |
| Constructing wrapper function "indtest"... | |
| indtest(data,g2,bic,[datacnt]) | |
| Constructing wrapper function "mcest"... | |
| mcest(data,alpha,beta,[datacnt]) | |
| Creating wrapper for Fortran function "ppnd7"("ppnd7")... | |
| Constructing wrapper function "ppnd7"... | |
| ppnd7 = ppnd7(p,ifault) | |
| Constructing wrapper function "ssort"... | |
| ssort(x,y,kflag,[n]) | |
| Constructing COMMON block support for "unif_seeds"... | |
| s1,s2 | |
| Wrote C/API module "flib" to file "build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c" | |
| Fortran 77 wrappers are saved to "build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.f" | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| adding 'build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.f' to sources. | |
| building extension "pymc.LazyFunction" sources | |
| building extension "pymc.Container_values" sources | |
| building extension "pymc.gp.linalg_utils" sources | |
| f2py options: [] | |
| f2py:> build/src.macosx-10.5-x86_64-2.7/pymc/gp/linalg_utilsmodule.c | |
| Reading fortran codes... | |
| Reading file 'pymc/gp/linalg_utils.f' (format:fix,strict) | |
| Reading file 'pymc/blas_wrap.f' (format:fix,strict) | |
| Post-processing... | |
| Block: linalg_utils | |
| Block: remove_duplicates | |
| Block: check_repeats | |
| Block: diag_call | |
| Block: cov_fun | |
| {'attrspec': ['intent(hide)']} | |
| In: :linalg_utils:pymc/gp/linalg_utils.f:basis_diag_call | |
| vars2fortran: No typespec for argument "nbas". | |
| Block: basis_diag_call | |
| Block: gp_array_logp | |
| Block: asqs | |
| {'attrspec': ['intent(hide)']} | |
| In: :linalg_utils:pymc/blas_wrap.f:dcopy_wrap | |
| vars2fortran: No typespec for argument "nx". | |
| Block: dcopy_wrap | |
| Block: dtrmm_wrap | |
| Block: dtrsm_wrap | |
| Block: dpotrf_wrap | |
| Block: dchdc_wrap | |
| Block: dpotrs_wrap | |
| Post-processing (stage 2)... | |
| Building modules... | |
| Constructing call-back function "cb_cov_fun_in_diag_call__user__routines" | |
| def cov_fun(xe): return q | |
| Building module "linalg_utils"... | |
| Constructing wrapper function "remove_duplicates"... | |
| nr,rf,rt,nu,xu,ui = remove_duplicates(x) | |
| Constructing wrapper function "check_repeats"... | |
| f,new_indices,n_new_indices = check_repeats(x,x_sofar,f_sofar) | |
| Constructing wrapper function "diag_call"... | |
| v = diag_call(x,cov_fun,[cov_fun_extra_args]) | |
| Constructing wrapper function "basis_diag_call"... | |
| v = basis_diag_call(basis_x) | |
| Constructing wrapper function "gp_array_logp"... | |
| like = gp_array_logp(x,mu,sig,[overwrite_x,overwrite_mu]) | |
| Constructing wrapper function "asqs"... | |
| asqs(c,s,[cmin,cmax]) | |
| Constructing wrapper function "dcopy_wrap"... | |
| dcopy_wrap(x,y) | |
| Constructing wrapper function "dtrmm_wrap"... | |
| dtrmm_wrap(a,b,side,transa,uplo,alpha) | |
| Constructing wrapper function "dtrsm_wrap"... | |
| dtrsm_wrap(a,b,side,transa,uplo,alpha) | |
| Constructing wrapper function "dpotrf_wrap"... | |
| info = dpotrf_wrap(a) | |
| Constructing wrapper function "dchdc_wrap"... | |
| piv,info = dchdc_wrap(a) | |
| Constructing wrapper function "dpotrs_wrap"... | |
| info = dpotrs_wrap(chol_fac,b,[uplo]) | |
| Wrote C/API module "linalg_utils" to file "build/src.macosx-10.5-x86_64-2.7/pymc/gp/linalg_utilsmodule.c" | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| building extension "pymc.gp.incomplete_chol" sources | |
| f2py options: [] | |
| f2py:> build/src.macosx-10.5-x86_64-2.7/pymc/gp/incomplete_cholmodule.c | |
| Reading fortran codes... | |
| Reading file 'pymc/gp/incomplete_chol.f' (format:fix,strict) | |
| Post-processing... | |
| Block: incomplete_chol | |
| Block: ichol_continue | |
| Block: rowfun | |
| Block: ichol | |
| Block: rowfun | |
| {'attrspec': ['intent(hide)']} | |
| In: :incomplete_chol:pymc/gp/incomplete_chol.f:ichol_basis | |
| vars2fortran: No typespec for argument "n_nug". | |
| Block: ichol_basis | |
| Block: ichol_full | |
| Post-processing (stage 2)... | |
| Building modules... | |
| Constructing call-back function "cb_rowfun_in_ichol_continue__user__routines" | |
| def rowfun(itot,x,rowvec): return | |
| Constructing call-back function "cb_rowfun_in_ichol__user__routines" | |
| def rowfun(i,x,rowvec): return | |
| Building module "incomplete_chol"... | |
| Constructing wrapper function "ichol_continue"... | |
| m,piv = ichol_continue(sig,diag,piv,reltol,x,rowfun,mold,[overwrite_x,rowfun_extra_args]) | |
| Constructing wrapper function "ichol"... | |
| sig,m,piv = ichol(diag,reltol,x,rowfun,rl,[overwrite_x,rowfun_extra_args]) | |
| Constructing wrapper function "ichol_basis"... | |
| sig,p,m = ichol_basis(basis,nug,reltol) | |
| Constructing wrapper function "ichol_full"... | |
| sig,m,p = ichol_full(c,reltol) | |
| Wrote C/API module "incomplete_chol" to file "build/src.macosx-10.5-x86_64-2.7/pymc/gp/incomplete_cholmodule.c" | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| building extension "pymc.gp.cov_funs.isotropic_cov_funs" sources | |
| f2py options: [] | |
| f2py:> build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/isotropic_cov_funsmodule.c | |
| Reading fortran codes... | |
| Reading file 'pymc/gp/cov_funs/isotropic_cov_funs.f' (format:fix,strict) | |
| Reading file 'blas/BLAS/dscal.f' (format:fix,strict) | |
| Post-processing... | |
| Block: isotropic_cov_funs | |
| Block: imul | |
| Block: symmetrize | |
| Block: matern | |
| Block: nsmatrn | |
| Block: stein_spatiotemporal | |
| Block: nsst | |
| Block: gaussian | |
| Block: exponential | |
| Block: brownian | |
| Block: frac_brownian | |
| Block: pow_exp | |
| Block: sphere | |
| Block: quadratic | |
| Block: dgamma | |
| Block: rkbesl | |
| Block: dscal | |
| Post-processing (stage 2)... | |
| Building modules... | |
| Building module "isotropic_cov_funs"... | |
| Constructing wrapper function "imul"... | |
| imul(c,a,[cmin,cmax,symm]) | |
| Constructing wrapper function "symmetrize"... | |
| symmetrize(c,[cmin,cmax]) | |
| Constructing wrapper function "matern"... | |
| matern(c,diff_degree,[cmin,cmax,symm]) | |
| Constructing wrapper function "nsmatrn"... | |
| nsmatrn(c,ddx,ddy,hx,hy,nmax,[cmin,cmax,symm]) | |
| Constructing wrapper function "stein_spatiotemporal"... | |
| stein_spatiotemporal(c,gt,origin_val,[cmin,cmax,symm]) | |
| Constructing wrapper function "nsst"... | |
| nsst(c,gt,origin_val,hx,hy,[cmin,cmax,symm]) | |
| Constructing wrapper function "gaussian"... | |
| gaussian(c,[cmin,cmax,symm]) | |
| Constructing wrapper function "exponential"... | |
| exponential(c,[cmin,cmax,symm]) | |
| Constructing wrapper function "brownian"... | |
| brownian(c,x,y,[cmin,cmax,symm]) | |
| Constructing wrapper function "frac_brownian"... | |
| frac_brownian(c,x,y,h,[cmin,cmax,symm]) | |
| Constructing wrapper function "pow_exp"... | |
| pow_exp(c,pow,[cmin,cmax,symm]) | |
| Constructing wrapper function "sphere"... | |
| sphere(c,[cmin,cmax,symm]) | |
| Constructing wrapper function "quadratic"... | |
| quadratic(c,phi,[cmin,cmax,symm]) | |
| Creating wrapper for Fortran function "dgamma"("dgamma")... | |
| Constructing wrapper function "dgamma"... | |
| dgamma = dgamma(x) | |
| Constructing wrapper function "rkbesl"... | |
| bk = rkbesl(x,alpha,nb,ize,ncalc) | |
| Constructing wrapper function "dscal"... | |
| getarrdims:warning: assumed shape array, using 0 instead of '*' | |
| dscal(n,da,dx,incx) | |
| Wrote C/API module "isotropic_cov_funs" to file "build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/isotropic_cov_funsmodule.c" | |
| Fortran 77 wrappers are saved to "build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f" | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| adding 'build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f' to sources. | |
| building extension "pymc.gp.cov_funs.distances" sources | |
| f2py options: [] | |
| f2py:> build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/distancesmodule.c | |
| Reading fortran codes... | |
| Reading file 'pymc/gp/cov_funs/distances.f' (format:fix,strict) | |
| Post-processing... | |
| Block: distances | |
| Block: euclidean | |
| Block: geographic | |
| Block: paniso_geo_rad | |
| Block: aniso_geo_rad | |
| Post-processing (stage 2)... | |
| Building modules... | |
| Building module "distances"... | |
| Constructing wrapper function "euclidean"... | |
| euclidean(d,x,y,[cmin,cmax,symm]) | |
| Constructing wrapper function "geographic"... | |
| geographic(d,x,y,[cmin,cmax,symm]) | |
| Constructing wrapper function "paniso_geo_rad"... | |
| paniso_geo_rad(d,x,y,ctrs,scals,[cmin,cmax,symm]) | |
| Constructing wrapper function "aniso_geo_rad"... | |
| aniso_geo_rad(d,x,y,inc,ecc,[cmin,cmax,symm]) | |
| Wrote C/API module "distances" to file "build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/distancesmodule.c" | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| build_src: building npy-pkg config files | |
| warning: no files found matching 'README.txt' | |
| warning: no files found matching 'INSTALL.txt' | |
| warning: no files found matching 'docs/UserGuide.pdf' | |
| Installing collected packages: pymc | |
| Running setup.py install for pymc | |
| unifing config_cc, config, build_clib, build_ext, build commands --compiler options | |
| unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options | |
| build_src | |
| building extension "pymc.flib" sources | |
| f2py options: ['skip:ppnd7'] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| adding 'build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.f' to sources. | |
| building extension "pymc.LazyFunction" sources | |
| building extension "pymc.Container_values" sources | |
| building extension "pymc.gp.linalg_utils" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| building extension "pymc.gp.incomplete_chol" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| building extension "pymc.gp.cov_funs.isotropic_cov_funs" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| adding 'build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f' to sources. | |
| building extension "pymc.gp.cov_funs.distances" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| build_src: building npy-pkg config files | |
| customize UnixCCompiler | |
| customize UnixCCompiler using build_ext | |
| customize Gnu95FCompiler | |
| Found executable /usr/local/bin/gfortran | |
| customize Gnu95FCompiler | |
| customize Gnu95FCompiler using build_ext | |
| building 'pymc.flib' extension | |
| compiling C sources | |
| C compiler: gcc -fno-strict-aliasing -I//anaconda/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/usr/local/opt/zlib/include | |
| compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.5-x86_64-2.7 -I//anaconda/lib/python2.7/site-packages/numpy/core/include -I//anaconda/include/python2.7 -c' | |
| extra options: '-msse3' | |
| gcc: cephes/i0.c | |
| gcc: cephes/c2f.c | |
| gcc: build/src.macosx-10.5-x86_64-2.7/fortranobject.c | |
| In file included from build/src.macosx-10.5-x86_64-2.7/fortranobject.c:2: | |
| In file included from build/src.macosx-10.5-x86_64-2.7/fortranobject.h:13: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:15: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1728: | |
| //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] | |
| #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/fortranobject.c:338:30: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] | |
| if ((fp->defs[i].func==NULL)) { | |
| ~~~~~~~~~~~~~~~~^~~~~~ | |
| build/src.macosx-10.5-x86_64-2.7/fortranobject.c:338:30: note: remove extraneous parentheses around the comparison to silence this warning | |
| if ((fp->defs[i].func==NULL)) { | |
| ~ ^ ~ | |
| build/src.macosx-10.5-x86_64-2.7/fortranobject.c:338:30: note: use '=' to turn this equality comparison into an assignment | |
| if ((fp->defs[i].func==NULL)) { | |
| ^~ | |
| = | |
| 2 warnings generated. | |
| gcc: build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c | |
| In file included from build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:18: | |
| In file included from build/src.macosx-10.5-x86_64-2.7/fortranobject.h:13: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:15: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1728: | |
| //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] | |
| #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:16934:7: warning: array index 2 is past the end of the array (which contains 2 elements) [-Warray-bounds] | |
| d = shape(x,2); | |
| ^ ~ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:86:24: note: expanded from macro 'shape' | |
| #define shape(var,dim) var ## _Dims[dim] | |
| ^ | |
| <scratch space>:394:1: note: expanded from here | |
| x_Dims | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:16835:3: note: array 'x_Dims' declared here | |
| npy_intp x_Dims[2] = {-1, -1}; | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:181:12: warning: unused function 'f2py_size' [-Wunused-function] | |
| static int f2py_size(PyArrayObject* var, ...) | |
| ^ | |
| 3 warnings generated. | |
| gcc: cephes/chbevl.c | |
| compiling Fortran sources | |
| Fortran f77 compiler: /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops | |
| Fortran f90 compiler: /usr/local/bin/gfortran -Wall -fno-second-underscore -m64 -fPIC -O3 -funroll-loops | |
| Fortran fix compiler: /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -Wall -fno-second-underscore -m64 -fPIC -O3 -funroll-loops | |
| compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.5-x86_64-2.7 -I//anaconda/lib/python2.7/site-packages/numpy/core/include -I//anaconda/include/python2.7 -c' | |
| gfortran:f77: pymc/flib.f | |
| Warning: Nonconforming tab character in column 1 of line 509 | |
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| Warning: Nonconforming tab character in column 1 of line 2030 | |
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| Warning: Nonconforming tab character in column 1 of line 2079 | |
| Warning: Nonconforming tab character in column 1 of line 2080 | |
| Warning: Nonconforming tab character in column 1 of line 2168 | |
| Warning: Nonconforming tab character in column 1 of line 2174 | |
| Warning: Nonconforming tab character in column 1 of line 2218 | |
| Warning: Nonconforming tab character in column 1 of line 2224 | |
| Warning: Nonconforming tab character in column 1 of line 2339 | |
| Warning: Nonconforming tab character in column 1 of line 2395 | |
| Warning: Nonconforming tab character in column 1 of line 2692 | |
| Warning: Nonconforming tab character in column 1 of line 2693 | |
| Warning: Nonconforming tab character in column 1 of line 2694 | |
| Warning: Nonconforming tab character in column 1 of line 2696 | |
| Warning: Nonconforming tab character in column 1 of line 2697 | |
| Warning: Nonconforming tab character in column 1 of line 2756 | |
| Warning: Nonconforming tab character in column 1 of line 2820 | |
| Warning: Nonconforming tab character in column 1 of line 2881 | |
| Warning: Nonconforming tab character in column 1 of line 3191 | |
| Warning: Nonconforming tab character in column 1 of line 3192 | |
| Warning: Nonconforming tab character in column 1 of line 3656 | |
| Warning: Nonconforming tab character in column 1 of line 3657 | |
| Warning: Nonconforming tab character in column 1 of line 3658 | |
| Warning: Nonconforming tab character in column 1 of line 3660 | |
| Warning: Nonconforming tab character in column 1 of line 3661 | |
| Warning: Nonconforming tab character in column 1 of line 3662 | |
| Warning: Nonconforming tab character in column 1 of line 3664 | |
| Warning: Nonconforming tab character in column 1 of line 3665 | |
| Warning: Nonconforming tab character in column 1 of line 3666 | |
| Warning: Nonconforming tab character in column 1 of line 3716 | |
| Warning: Nonconforming tab character in column 1 of line 3717 | |
| Warning: Nonconforming tab character in column 1 of line 3718 | |
| Warning: Nonconforming tab character in column 1 of line 3720 | |
| Warning: Nonconforming tab character in column 1 of line 3721 | |
| Warning: Nonconforming tab character in column 1 of line 3722 | |
| Warning: Nonconforming tab character in column 1 of line 3724 | |
| Warning: Nonconforming tab character in column 1 of line 3725 | |
| Warning: Nonconforming tab character in column 1 of line 3726 | |
| Warning: Nonconforming tab character in column 1 of line 3732 | |
| Warning: Nonconforming tab character in column 1 of line 3846 | |
| Warning: Nonconforming tab character in column 1 of line 3847 | |
| Warning: Nonconforming tab character in column 1 of line 3849 | |
| Warning: Nonconforming tab character in column 1 of line 3851 | |
| Warning: Nonconforming tab character in column 1 of line 3875 | |
| Warning: Nonconforming tab character in column 1 of line 3876 | |
| Warning: Nonconforming tab character in column 1 of line 3877 | |
| Warning: Nonconforming tab character in column 1 of line 3878 | |
| Warning: Nonconforming tab character in column 1 of line 4276 | |
| Warning: Nonconforming tab character in column 1 of line 4277 | |
| Warning: Nonconforming tab character in column 1 of line 4278 | |
| Warning: Nonconforming tab character in column 1 of line 4280 | |
| Warning: Nonconforming tab character in column 1 of line 4281 | |
| Warning: Nonconforming tab character in column 1 of line 4282 | |
| Warning: Nonconforming tab character in column 1 of line 4284 | |
| Warning: Nonconforming tab character in column 1 of line 4285 | |
| Warning: Nonconforming tab character in column 1 of line 4286 | |
| Warning: Nonconforming tab character in column 1 of line 4288 | |
| Warning: Nonconforming tab character in column 1 of line 4289 | |
| Warning: Nonconforming tab character in column 1 of line 4290 | |
| Warning: Nonconforming tab character in column 1 of line 4342 | |
| Warning: Nonconforming tab character in column 1 of line 4343 | |
| Warning: Nonconforming tab character in column 1 of line 4344 | |
| Warning: Nonconforming tab character in column 1 of line 4346 | |
| Warning: Nonconforming tab character in column 1 of line 4347 | |
| Warning: Nonconforming tab character in column 1 of line 4348 | |
| Warning: Nonconforming tab character in column 1 of line 4350 | |
| Warning: Nonconforming tab character in column 1 of line 4351 | |
| Warning: Nonconforming tab character in column 1 of line 4352 | |
| Warning: Nonconforming tab character in column 1 of line 4354 | |
| Warning: Nonconforming tab character in column 1 of line 4355 | |
| Warning: Nonconforming tab character in column 1 of line 4356 | |
| Warning: Nonconforming tab character in column 1 of line 4620 | |
| Warning: Nonconforming tab character in column 1 of line 4622 | |
| Warning: Nonconforming tab character in column 1 of line 4623 | |
| Warning: Nonconforming tab character in column 1 of line 4624 | |
| Warning: Nonconforming tab character in column 1 of line 4626 | |
| Warning: Nonconforming tab character in column 1 of line 4628 | |
| Warning: Nonconforming tab character in column 1 of line 4630 | |
| Warning: Nonconforming tab character in column 1 of line 4632 | |
| Warning: Nonconforming tab character in column 1 of line 4633 | |
| Warning: Nonconforming tab character in column 1 of line 4634 | |
| Warning: Nonconforming tab character in column 1 of line 4635 | |
| Warning: Nonconforming tab character in column 1 of line 4637 | |
| Warning: Nonconforming tab character in column 1 of line 4638 | |
| Warning: Nonconforming tab character in column 1 of line 4639 | |
| Warning: Nonconforming tab character in column 1 of line 4640 | |
| Warning: Nonconforming tab character in column 1 of line 4642 | |
| Warning: Nonconforming tab character in column 1 of line 4643 | |
| Warning: Nonconforming tab character in column 1 of line 4644 | |
| Warning: Nonconforming tab character in column 1 of line 4645 | |
| Warning: Nonconforming tab character in column 1 of line 4646 | |
| pymc/flib.f:316.55: | |
| DOUBLE PRECISION mu_now, tau_now, alph_now, d_now, like | |
| 1 | |
| Warning: Unused variable 'd_now' declared at (1) | |
| pymc/flib.f:314.42: | |
| INTEGER i, nx, nalph, nmu, ntau, tnx | |
| 1 | |
| Warning: Unused variable 'tnx' declared at (1) | |
| pymc/flib.f:442.71: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'gradxlike' at (1) | |
| pymc/flib.f:461.40: | |
| DOUBLE PRECISION like, low, high | |
| 1 | |
| Warning: Unused variable 'high' declared at (1) | |
| pymc/flib.f:458.36: | |
| INTEGER n, nlower, nupper, i | |
| 1 | |
| Warning: Unused variable 'i' declared at (1) | |
| pymc/flib.f:461.29: | |
| DOUBLE PRECISION like, low, high | |
| 1 | |
| Warning: Unused variable 'like' declared at (1) | |
| pymc/flib.f:461.34: | |
| DOUBLE PRECISION like, low, high | |
| 1 | |
| Warning: Unused variable 'low' declared at (1) | |
| pymc/flib.f:442.39: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'lower' at (1) | |
| pymc/flib.f:442.45: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'upper' at (1) | |
| pymc/flib.f:442.33: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'x' at (1) | |
| pymc/flib.f:692.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:760.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:834.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:906.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:976.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:1186.29: | |
| DOUBLE PRECISION factln | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:1185.51: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact | |
| 1 | |
| Warning: Unused variable 'sumfact' declared at (1) | |
| pymc/flib.f:1185.27: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact | |
| 1 | |
| Warning: Unused variable 'sumx' declared at (1) | |
| pymc/flib.f:1300.55: | |
| DOUBLE PRECISION mu(nmu), gradlike(nmu),grad, cdf | |
| 1 | |
| Warning: Unused variable 'cdf' declared at (1) | |
| pymc/flib.f:1302.29: | |
| DOUBLE PRECISION factln, gammq | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:1302.36: | |
| DOUBLE PRECISION factln, gammq | |
| 1 | |
| Warning: Unused variable 'gammq' declared at (1) | |
| pymc/flib.f:1301.59: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact, sumcdf | |
| 1 | |
| Warning: Unused variable 'sumcdf' declared at (1) | |
| pymc/flib.f:1301.51: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact, sumcdf | |
| 1 | |
| Warning: Unused variable 'sumfact' declared at (1) | |
| pymc/flib.f:1301.27: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact, sumcdf | |
| 1 | |
| Warning: Unused variable 'sumx' declared at (1) | |
| pymc/flib.f:1402.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2154.40: | |
| DOUBLE PRECISION gradlike(n), grad | |
| 1 | |
| Warning: Unused variable 'grad' declared at (1) | |
| pymc/flib.f:2665.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2728.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2793.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2903.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2959.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3021.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3396.58: | |
| DOUBLE PRECISION gradlike(nx), atmp, btmp, PI, glike | |
| 1 | |
| Warning: Unused variable 'glike' declared at (1) | |
| pymc/flib.f:3646.37: | |
| DOUBLE PRECISION gammln, factln | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:3646.29: | |
| DOUBLE PRECISION gammln, factln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3706.37: | |
| DOUBLE PRECISION gammln, factln, psi | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:3706.29: | |
| DOUBLE PRECISION gammln, factln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3836.29: | |
| DOUBLE PRECISION factln | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:4039.26: | |
| DOUBLE PRECISION psi | |
| 1 | |
| Warning: Unused variable 'psi' declared at (1) | |
| pymc/flib.f:4266.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:4332.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:5184.35: | |
| DOUBLE PRECISION like, factln, infinity, sump | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:5186.23: | |
| INTEGER i,j,n_tmp | |
| 1 | |
| Warning: Unused variable 'n_tmp' declared at (1) | |
| pymc/flib.f:5434.26: | |
| DOUBLE PRECISION tmp | |
| 1 | |
| Warning: Unused variable 'tmp' declared at (1) | |
| pymc/flib.f:5488.25: | |
| DOUBLE PRECISION i0 | |
| 1 | |
| Warning: Unused variable 'i0' declared at (1) | |
| pymc/flib.f:5481.26: | |
| DOUBLE PRECISION tmp | |
| 1 | |
| Warning: Unused variable 'tmp' declared at (1) | |
| pymc/flib.f:5535.25: | |
| DOUBLE PRECISION i0 | |
| 1 | |
| Warning: Unused variable 'i0' declared at (1) | |
| pymc/flib.f:5528.26: | |
| DOUBLE PRECISION tmp | |
| 1 | |
| Warning: Unused variable 'tmp' declared at (1) | |
| pymc/flib.f: In function 'elgs': | |
| pymc/flib.f:4882:0: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized] | |
| pymc/flib.f: In function 'exponweib_gl': | |
| pymc/flib.f:778:0: warning: 'nc' may be used uninitialized in this function [-Wuninitialized] | |
| pymc/flib.f: In function 'exponweib_gs': | |
| pymc/flib.f:994:0: warning: 'nc' may be used uninitialized in this function [-Wuninitialized] | |
| gfortran:f77: pymc/histogram.f | |
| gfortran:f77: pymc/flib_blas.f | |
| pymc/flib_blas.f:202.25: | |
| DOUBLE PRECISION PI | |
| 1 | |
| Warning: Unused variable 'pi' declared at (1) | |
| gfortran:f77: pymc/blas_wrap.f | |
| gfortran:f77: pymc/math.f | |
| pymc/math.f:396.6: | |
| DOUBLE PRECISION FUNCTION DERF(X) | |
| 1 | |
| Warning: 'derf' declared at (1) is also the name of an intrinsic. It can only be called via an explicit interface or if declared EXTERNAL. | |
| pymc/math.f:417.6: | |
| DOUBLE PRECISION FUNCTION DERFC(X) | |
| 1 | |
| Warning: 'derfc' declared at (1) is also the name of an intrinsic. It can only be called via an explicit interface or if declared EXTERNAL. | |
| gfortran:f77: pymc/gibbsit.f | |
| pymc/gibbsit.f:2160.5: | |
| 215 IF (R .GT. .5898437) GO TO 220 | |
| 1 | |
| Warning: Label 215 at (1) defined but not used | |
| pymc/gibbsit.f:2077.5: | |
| 115 IF (R .GT. .5898437) GO TO 120 | |
| 1 | |
| Warning: Label 115 at (1) defined but not used | |
| pymc/gibbsit.f:2064.5: | |
| 15 IF (KFLAG.GE.1) GO TO 30 | |
| 1 | |
| Warning: Label 15 at (1) defined but not used | |
| pymc/gibbsit.f:1204.48: | |
| cutpt = empquant(original,iteracnt,qhat,work) | |
| 1 | |
| Warning: Type mismatch in argument 'work' at (1); passed INTEGER(4) to REAL(8) | |
| gfortran:f77: build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.f | |
| /usr/local/bin/gfortran -Wall -L/usr/local/opt/zlib/lib build/temp.macosx-10.5-x86_64-2.7/cephes/i0.o build/temp.macosx-10.5-x86_64-2.7/cephes/c2f.o build/temp.macosx-10.5-x86_64-2.7/cephes/chbevl.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/fortranobject.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib.o build/temp.macosx-10.5-x86_64-2.7/pymc/histogram.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib_blas.o build/temp.macosx-10.5-x86_64-2.7/pymc/blas_wrap.o build/temp.macosx-10.5-x86_64-2.7/pymc/math.o build/temp.macosx-10.5-x86_64-2.7/pymc/gibbsit.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.o -L/usr/local/Cellar/gfortran/4.7.2/gfortran/lib/gcc/x86_64-apple-darwin12.2.0/4.7.2 -lgfortran -o build/lib.macosx-10.5-x86_64-2.7/pymc/flib.so -Wl,-framework -Wl,Accelerate | |
| Undefined symbols for architecture x86_64: | |
| "_PyArg_ParseTupleAndKeywords", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyCObject_AsVoidPtr", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_AsVoidPtr in fortranobject.o | |
| "_PyCObject_FromVoidPtr", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| _F2PyCapsule_FromVoidPtr in fortranobject.o | |
| "_PyCObject_Type", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_Check in fortranobject.o | |
| "_PyComplex_FromDoubles", referenced from: | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| "_PyComplex_Type", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyDict_DelItemString", referenced from: | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_GetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| "_PyDict_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_SetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _PyFortranObject_New in fortranobject.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyErr_Clear", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyErr_Format", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyErr_NewException", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyErr_Occurred", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| ... | |
| "_PyErr_Print", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| "_PyErr_SetString", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyEval_RestoreThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyEval_SaveThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyExc_AttributeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyExc_ImportError", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyExc_MemoryError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| "_PyExc_RuntimeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyExc_TypeError", referenced from: | |
| _fortran_call in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyExc_ValueError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyFloat_Type", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyImport_ImportModule", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyMem_Free", referenced from: | |
| _fortran_dealloc in fortranobject.o | |
| "_PyModule_GetDict", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyNumber_Float", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyNumber_Int", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| "_PyObject_GetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _fortran_repr in fortranobject.o | |
| "_PyObject_IsTrue", referenced from: | |
| _f2py_rout_flib_constrain in flibmodule.o | |
| "_PyObject_SetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyObject_Str", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyObject_Type", referenced from: | |
| _array_from_pyobj in fortranobject.o | |
| "_PySequence_Check", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PySequence_GetItem", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyString_AsString", referenced from: | |
| _fortran_repr in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyString_ConcatAndDel", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_PyString_FromFormat", referenced from: | |
| _fortran_repr in fortranobject.o | |
| "_PyString_FromString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyType_IsSubtype", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyType_Type", referenced from: | |
| _initflib in flibmodule.o | |
| "_Py_BuildValue", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_Py_FindMethod", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_Py_InitModule4_64", referenced from: | |
| _initflib in flibmodule.o | |
| "__PyObject_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| "__Py_NoneStruct", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| ld: symbol(s) not found for architecture x86_64 | |
| collect2: error: ld returned 1 exit status | |
| Undefined symbols for architecture x86_64: | |
| "_PyArg_ParseTupleAndKeywords", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyCObject_AsVoidPtr", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_AsVoidPtr in fortranobject.o | |
| "_PyCObject_FromVoidPtr", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| _F2PyCapsule_FromVoidPtr in fortranobject.o | |
| "_PyCObject_Type", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_Check in fortranobject.o | |
| "_PyComplex_FromDoubles", referenced from: | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| "_PyComplex_Type", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyDict_DelItemString", referenced from: | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_GetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| "_PyDict_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_SetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _PyFortranObject_New in fortranobject.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyErr_Clear", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyErr_Format", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyErr_NewException", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyErr_Occurred", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| ... | |
| "_PyErr_Print", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| "_PyErr_SetString", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyEval_RestoreThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyEval_SaveThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyExc_AttributeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyExc_ImportError", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyExc_MemoryError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| "_PyExc_RuntimeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyExc_TypeError", referenced from: | |
| _fortran_call in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyExc_ValueError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyFloat_Type", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyImport_ImportModule", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyMem_Free", referenced from: | |
| _fortran_dealloc in fortranobject.o | |
| "_PyModule_GetDict", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyNumber_Float", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyNumber_Int", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| "_PyObject_GetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _fortran_repr in fortranobject.o | |
| "_PyObject_IsTrue", referenced from: | |
| _f2py_rout_flib_constrain in flibmodule.o | |
| "_PyObject_SetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyObject_Str", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyObject_Type", referenced from: | |
| _array_from_pyobj in fortranobject.o | |
| "_PySequence_Check", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PySequence_GetItem", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyString_AsString", referenced from: | |
| _fortran_repr in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyString_ConcatAndDel", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_PyString_FromFormat", referenced from: | |
| _fortran_repr in fortranobject.o | |
| "_PyString_FromString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyType_IsSubtype", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyType_Type", referenced from: | |
| _initflib in flibmodule.o | |
| "_Py_BuildValue", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_Py_FindMethod", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_Py_InitModule4_64", referenced from: | |
| _initflib in flibmodule.o | |
| "__PyObject_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| "__Py_NoneStruct", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| ld: symbol(s) not found for architecture x86_64 | |
| collect2: error: ld returned 1 exit status | |
| error: Command "/usr/local/bin/gfortran -Wall -L/usr/local/opt/zlib/lib build/temp.macosx-10.5-x86_64-2.7/cephes/i0.o build/temp.macosx-10.5-x86_64-2.7/cephes/c2f.o build/temp.macosx-10.5-x86_64-2.7/cephes/chbevl.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/fortranobject.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib.o build/temp.macosx-10.5-x86_64-2.7/pymc/histogram.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib_blas.o build/temp.macosx-10.5-x86_64-2.7/pymc/blas_wrap.o build/temp.macosx-10.5-x86_64-2.7/pymc/math.o build/temp.macosx-10.5-x86_64-2.7/pymc/gibbsit.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.o -L/usr/local/Cellar/gfortran/4.7.2/gfortran/lib/gcc/x86_64-apple-darwin12.2.0/4.7.2 -lgfortran -o build/lib.macosx-10.5-x86_64-2.7/pymc/flib.so -Wl,-framework -Wl,Accelerate" failed with exit status 1 | |
| Complete output from command //anaconda/bin/python -c "import setuptools;__file__='/private/var/folders/6l/83vj6nxn6g1b6l2c9ycym4hc0000gn/T/pip_build_olga/pymc/setup.py';exec(compile(open(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /var/folders/6l/83vj6nxn6g1b6l2c9ycym4hc0000gn/T/pip-f6keEp-record/install-record.txt --single-version-externally-managed: | |
| running install | |
| running build | |
| running config_cc | |
| unifing config_cc, config, build_clib, build_ext, build commands --compiler options | |
| running config_fc | |
| unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options | |
| running build_src | |
| build_src | |
| building extension "pymc.flib" sources | |
| f2py options: ['skip:ppnd7'] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| adding 'build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.f' to sources. | |
| building extension "pymc.LazyFunction" sources | |
| building extension "pymc.Container_values" sources | |
| building extension "pymc.gp.linalg_utils" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| building extension "pymc.gp.incomplete_chol" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| building extension "pymc.gp.cov_funs.isotropic_cov_funs" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| adding 'build/src.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs/isotropic_cov_funs-f2pywrappers.f' to sources. | |
| building extension "pymc.gp.cov_funs.distances" sources | |
| f2py options: [] | |
| adding 'build/src.macosx-10.5-x86_64-2.7/fortranobject.c' to sources. | |
| adding 'build/src.macosx-10.5-x86_64-2.7' to include_dirs. | |
| build_src: building npy-pkg config files | |
| running build_py | |
| creating build/lib.macosx-10.5-x86_64-2.7 | |
| creating build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/calc_utils.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/CircularStochastic.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/CommonDeterministics.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/Container.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/datatypes.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/decorators.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/diagnostics.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/distributions.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/graph.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/InstantiationDecorators.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/Matplot.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/MCMC.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/Model.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/Node.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/NormalApproximation.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/NumpyDeterministics.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/progressbar.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/PyMCObjects.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/ScipyDistributions.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/six.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/StepMethods.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/threadpool.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| copying pymc/utils.py -> build/lib.macosx-10.5-x86_64-2.7/pymc | |
| creating build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/base.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/hdf5.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/hdf5ea.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/no_trace.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/pickle.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/ram.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/sqlite.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| copying pymc/database/txt.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/database | |
| creating build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/custom_step.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/disaster_model.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/disaster_model_gof.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/disaster_model_linear.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/disaster_model_missing.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/disaster_model_null.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/gelman_bioassay.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/melanoma.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/melanoma_data.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/weibull_fit.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| copying pymc/examples/zip.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples | |
| creating build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/basiscov.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/cov.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/covparams.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/MCMC.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/mean.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/mesh_choice.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/observation.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/PyMCmodel.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| copying pymc/examples/gp/realizations.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/examples/gp | |
| creating build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/objectmodel.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_adaptive.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_AM.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_basiscov.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_binary_step.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_container.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_convergence.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_cov.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_database.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_distributions.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_GP_MCMC.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_gradients.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_graph.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_instantiation.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_interactive.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_MCMCSampler.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_mean.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_missing.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_norm_approx.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_observation.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_realization.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_special_methods.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| copying pymc/tests/test_utils.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/tests | |
| creating build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/BasisCovariance.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/Covariance.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/FullRankCovariance.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/gp_submodel.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/gpplots.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/GPutils.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/Mean.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/NearlyFullRankCovariance.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/Realization.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| copying pymc/gp/step_methods.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp | |
| creating build/lib.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs | |
| copying pymc/gp/cov_funs/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs | |
| copying pymc/gp/cov_funs/bases.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs | |
| copying pymc/gp/cov_funs/brownian.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs | |
| copying pymc/gp/cov_funs/cov_utils.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs | |
| copying pymc/gp/cov_funs/nsmatern.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs | |
| copying pymc/gp/cov_funs/wrapped_distances.py -> build/lib.macosx-10.5-x86_64-2.7/pymc/gp/cov_funs | |
| running build_ext | |
| customize UnixCCompiler | |
| customize UnixCCompiler using build_ext | |
| customize Gnu95FCompiler | |
| Found executable /usr/local/bin/gfortran | |
| customize Gnu95FCompiler | |
| customize Gnu95FCompiler using build_ext | |
| building 'pymc.flib' extension | |
| compiling C sources | |
| C compiler: gcc -fno-strict-aliasing -I//anaconda/include -arch x86_64 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/usr/local/opt/zlib/include | |
| creating build/temp.macosx-10.5-x86_64-2.7 | |
| creating build/temp.macosx-10.5-x86_64-2.7/cephes | |
| creating build/temp.macosx-10.5-x86_64-2.7/build | |
| creating build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7 | |
| creating build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc | |
| compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.5-x86_64-2.7 -I//anaconda/lib/python2.7/site-packages/numpy/core/include -I//anaconda/include/python2.7 -c' | |
| extra options: '-msse3' | |
| gcc: cephes/i0.c | |
| gcc: cephes/c2f.c | |
| gcc: build/src.macosx-10.5-x86_64-2.7/fortranobject.c | |
| In file included from build/src.macosx-10.5-x86_64-2.7/fortranobject.c:2: | |
| In file included from build/src.macosx-10.5-x86_64-2.7/fortranobject.h:13: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:15: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1728: | |
| //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] | |
| #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/fortranobject.c:338:30: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] | |
| if ((fp->defs[i].func==NULL)) { | |
| ~~~~~~~~~~~~~~~~^~~~~~ | |
| build/src.macosx-10.5-x86_64-2.7/fortranobject.c:338:30: note: remove extraneous parentheses around the comparison to silence this warning | |
| if ((fp->defs[i].func==NULL)) { | |
| ~ ^ ~ | |
| build/src.macosx-10.5-x86_64-2.7/fortranobject.c:338:30: note: use '=' to turn this equality comparison into an assignment | |
| if ((fp->defs[i].func==NULL)) { | |
| ^~ | |
| = | |
| 2 warnings generated. | |
| gcc: build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c | |
| In file included from build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:18: | |
| In file included from build/src.macosx-10.5-x86_64-2.7/fortranobject.h:13: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:15: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: | |
| In file included from //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1728: | |
| //anaconda/lib/python2.7/site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] | |
| #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:16934:7: warning: array index 2 is past the end of the array (which contains 2 elements) [-Warray-bounds] | |
| d = shape(x,2); | |
| ^ ~ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:86:24: note: expanded from macro 'shape' | |
| #define shape(var,dim) var ## _Dims[dim] | |
| ^ | |
| <scratch space>:394:1: note: expanded from here | |
| x_Dims | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:16835:3: note: array 'x_Dims' declared here | |
| npy_intp x_Dims[2] = {-1, -1}; | |
| ^ | |
| build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.c:181:12: warning: unused function 'f2py_size' [-Wunused-function] | |
| static int f2py_size(PyArrayObject* var, ...) | |
| ^ | |
| 3 warnings generated. | |
| gcc: cephes/chbevl.c | |
| compiling Fortran sources | |
| Fortran f77 compiler: /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops | |
| Fortran f90 compiler: /usr/local/bin/gfortran -Wall -fno-second-underscore -m64 -fPIC -O3 -funroll-loops | |
| Fortran fix compiler: /usr/local/bin/gfortran -Wall -ffixed-form -fno-second-underscore -Wall -fno-second-underscore -m64 -fPIC -O3 -funroll-loops | |
| creating build/temp.macosx-10.5-x86_64-2.7/pymc | |
| compile options: '-DNO_ATLAS_INFO=3 -Ibuild/src.macosx-10.5-x86_64-2.7 -I//anaconda/lib/python2.7/site-packages/numpy/core/include -I//anaconda/include/python2.7 -c' | |
| gfortran:f77: pymc/flib.f | |
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| pymc/flib.f:316.55: | |
| DOUBLE PRECISION mu_now, tau_now, alph_now, d_now, like | |
| 1 | |
| Warning: Unused variable 'd_now' declared at (1) | |
| pymc/flib.f:314.42: | |
| INTEGER i, nx, nalph, nmu, ntau, tnx | |
| 1 | |
| Warning: Unused variable 'tnx' declared at (1) | |
| pymc/flib.f:442.71: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'gradxlike' at (1) | |
| pymc/flib.f:461.40: | |
| DOUBLE PRECISION like, low, high | |
| 1 | |
| Warning: Unused variable 'high' declared at (1) | |
| pymc/flib.f:458.36: | |
| INTEGER n, nlower, nupper, i | |
| 1 | |
| Warning: Unused variable 'i' declared at (1) | |
| pymc/flib.f:461.29: | |
| DOUBLE PRECISION like, low, high | |
| 1 | |
| Warning: Unused variable 'like' declared at (1) | |
| pymc/flib.f:461.34: | |
| DOUBLE PRECISION like, low, high | |
| 1 | |
| Warning: Unused variable 'low' declared at (1) | |
| pymc/flib.f:442.39: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'lower' at (1) | |
| pymc/flib.f:442.45: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'upper' at (1) | |
| pymc/flib.f:442.33: | |
| subroutine uniform_grad_x(x,lower,upper,n,nlower,nupper,gradxlike) | |
| 1 | |
| Warning: Unused dummy argument 'x' at (1) | |
| pymc/flib.f:692.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:760.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:834.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:906.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:976.41: | |
| DOUBLE PRECISION aa, cc, sigma, pdf | |
| 1 | |
| Warning: Unused variable 'pdf' declared at (1) | |
| pymc/flib.f:1186.29: | |
| DOUBLE PRECISION factln | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:1185.51: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact | |
| 1 | |
| Warning: Unused variable 'sumfact' declared at (1) | |
| pymc/flib.f:1185.27: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact | |
| 1 | |
| Warning: Unused variable 'sumx' declared at (1) | |
| pymc/flib.f:1300.55: | |
| DOUBLE PRECISION mu(nmu), gradlike(nmu),grad, cdf | |
| 1 | |
| Warning: Unused variable 'cdf' declared at (1) | |
| pymc/flib.f:1302.29: | |
| DOUBLE PRECISION factln, gammq | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:1302.36: | |
| DOUBLE PRECISION factln, gammq | |
| 1 | |
| Warning: Unused variable 'gammq' declared at (1) | |
| pymc/flib.f:1301.59: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact, sumcdf | |
| 1 | |
| Warning: Unused variable 'sumcdf' declared at (1) | |
| pymc/flib.f:1301.51: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact, sumcdf | |
| 1 | |
| Warning: Unused variable 'sumfact' declared at (1) | |
| pymc/flib.f:1301.27: | |
| DOUBLE PRECISION sumx, mut, infinity, sumfact, sumcdf | |
| 1 | |
| Warning: Unused variable 'sumx' declared at (1) | |
| pymc/flib.f:1402.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2154.40: | |
| DOUBLE PRECISION gradlike(n), grad | |
| 1 | |
| Warning: Unused variable 'grad' declared at (1) | |
| pymc/flib.f:2665.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2728.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2793.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2903.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:2959.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3021.29: | |
| DOUBLE PRECISION gammln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3396.58: | |
| DOUBLE PRECISION gradlike(nx), atmp, btmp, PI, glike | |
| 1 | |
| Warning: Unused variable 'glike' declared at (1) | |
| pymc/flib.f:3646.37: | |
| DOUBLE PRECISION gammln, factln | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:3646.29: | |
| DOUBLE PRECISION gammln, factln | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3706.37: | |
| DOUBLE PRECISION gammln, factln, psi | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:3706.29: | |
| DOUBLE PRECISION gammln, factln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:3836.29: | |
| DOUBLE PRECISION factln | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:4039.26: | |
| DOUBLE PRECISION psi | |
| 1 | |
| Warning: Unused variable 'psi' declared at (1) | |
| pymc/flib.f:4266.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:4332.29: | |
| DOUBLE PRECISION gammln, psi | |
| 1 | |
| Warning: Unused variable 'gammln' declared at (1) | |
| pymc/flib.f:5184.35: | |
| DOUBLE PRECISION like, factln, infinity, sump | |
| 1 | |
| Warning: Unused variable 'factln' declared at (1) | |
| pymc/flib.f:5186.23: | |
| INTEGER i,j,n_tmp | |
| 1 | |
| Warning: Unused variable 'n_tmp' declared at (1) | |
| pymc/flib.f:5434.26: | |
| DOUBLE PRECISION tmp | |
| 1 | |
| Warning: Unused variable 'tmp' declared at (1) | |
| pymc/flib.f:5488.25: | |
| DOUBLE PRECISION i0 | |
| 1 | |
| Warning: Unused variable 'i0' declared at (1) | |
| pymc/flib.f:5481.26: | |
| DOUBLE PRECISION tmp | |
| 1 | |
| Warning: Unused variable 'tmp' declared at (1) | |
| pymc/flib.f:5535.25: | |
| DOUBLE PRECISION i0 | |
| 1 | |
| Warning: Unused variable 'i0' declared at (1) | |
| pymc/flib.f:5528.26: | |
| DOUBLE PRECISION tmp | |
| 1 | |
| Warning: Unused variable 'tmp' declared at (1) | |
| pymc/flib.f: In function 'elgs': | |
| pymc/flib.f:4882:0: warning: 'k' may be used uninitialized in this function [-Wmaybe-uninitialized] | |
| pymc/flib.f: In function 'exponweib_gl': | |
| pymc/flib.f:778:0: warning: 'nc' may be used uninitialized in this function [-Wuninitialized] | |
| pymc/flib.f: In function 'exponweib_gs': | |
| pymc/flib.f:994:0: warning: 'nc' may be used uninitialized in this function [-Wuninitialized] | |
| gfortran:f77: pymc/histogram.f | |
| gfortran:f77: pymc/flib_blas.f | |
| pymc/flib_blas.f:202.25: | |
| DOUBLE PRECISION PI | |
| 1 | |
| Warning: Unused variable 'pi' declared at (1) | |
| gfortran:f77: pymc/blas_wrap.f | |
| gfortran:f77: pymc/math.f | |
| pymc/math.f:396.6: | |
| DOUBLE PRECISION FUNCTION DERF(X) | |
| 1 | |
| Warning: 'derf' declared at (1) is also the name of an intrinsic. It can only be called via an explicit interface or if declared EXTERNAL. | |
| pymc/math.f:417.6: | |
| DOUBLE PRECISION FUNCTION DERFC(X) | |
| 1 | |
| Warning: 'derfc' declared at (1) is also the name of an intrinsic. It can only be called via an explicit interface or if declared EXTERNAL. | |
| gfortran:f77: pymc/gibbsit.f | |
| pymc/gibbsit.f:2160.5: | |
| 215 IF (R .GT. .5898437) GO TO 220 | |
| 1 | |
| Warning: Label 215 at (1) defined but not used | |
| pymc/gibbsit.f:2077.5: | |
| 115 IF (R .GT. .5898437) GO TO 120 | |
| 1 | |
| Warning: Label 115 at (1) defined but not used | |
| pymc/gibbsit.f:2064.5: | |
| 15 IF (KFLAG.GE.1) GO TO 30 | |
| 1 | |
| Warning: Label 15 at (1) defined but not used | |
| pymc/gibbsit.f:1204.48: | |
| cutpt = empquant(original,iteracnt,qhat,work) | |
| 1 | |
| Warning: Type mismatch in argument 'work' at (1); passed INTEGER(4) to REAL(8) | |
| gfortran:f77: build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.f | |
| /usr/local/bin/gfortran -Wall -L/usr/local/opt/zlib/lib build/temp.macosx-10.5-x86_64-2.7/cephes/i0.o build/temp.macosx-10.5-x86_64-2.7/cephes/c2f.o build/temp.macosx-10.5-x86_64-2.7/cephes/chbevl.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/fortranobject.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib.o build/temp.macosx-10.5-x86_64-2.7/pymc/histogram.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib_blas.o build/temp.macosx-10.5-x86_64-2.7/pymc/blas_wrap.o build/temp.macosx-10.5-x86_64-2.7/pymc/math.o build/temp.macosx-10.5-x86_64-2.7/pymc/gibbsit.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.o -L/usr/local/Cellar/gfortran/4.7.2/gfortran/lib/gcc/x86_64-apple-darwin12.2.0/4.7.2 -lgfortran -o build/lib.macosx-10.5-x86_64-2.7/pymc/flib.so -Wl,-framework -Wl,Accelerate | |
| Undefined symbols for architecture x86_64: | |
| "_PyArg_ParseTupleAndKeywords", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyCObject_AsVoidPtr", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_AsVoidPtr in fortranobject.o | |
| "_PyCObject_FromVoidPtr", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| _F2PyCapsule_FromVoidPtr in fortranobject.o | |
| "_PyCObject_Type", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_Check in fortranobject.o | |
| "_PyComplex_FromDoubles", referenced from: | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| "_PyComplex_Type", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyDict_DelItemString", referenced from: | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_GetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| "_PyDict_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_SetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _PyFortranObject_New in fortranobject.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyErr_Clear", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyErr_Format", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyErr_NewException", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyErr_Occurred", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| ... | |
| "_PyErr_Print", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| "_PyErr_SetString", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyEval_RestoreThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyEval_SaveThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyExc_AttributeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyExc_ImportError", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyExc_MemoryError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| "_PyExc_RuntimeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyExc_TypeError", referenced from: | |
| _fortran_call in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyExc_ValueError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyFloat_Type", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyImport_ImportModule", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyMem_Free", referenced from: | |
| _fortran_dealloc in fortranobject.o | |
| "_PyModule_GetDict", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyNumber_Float", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyNumber_Int", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| "_PyObject_GetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _fortran_repr in fortranobject.o | |
| "_PyObject_IsTrue", referenced from: | |
| _f2py_rout_flib_constrain in flibmodule.o | |
| "_PyObject_SetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyObject_Str", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyObject_Type", referenced from: | |
| _array_from_pyobj in fortranobject.o | |
| "_PySequence_Check", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PySequence_GetItem", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyString_AsString", referenced from: | |
| _fortran_repr in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyString_ConcatAndDel", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_PyString_FromFormat", referenced from: | |
| _fortran_repr in fortranobject.o | |
| "_PyString_FromString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyType_IsSubtype", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyType_Type", referenced from: | |
| _initflib in flibmodule.o | |
| "_Py_BuildValue", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_Py_FindMethod", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_Py_InitModule4_64", referenced from: | |
| _initflib in flibmodule.o | |
| "__PyObject_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| "__Py_NoneStruct", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| ld: symbol(s) not found for architecture x86_64 | |
| collect2: error: ld returned 1 exit status | |
| Undefined symbols for architecture x86_64: | |
| "_PyArg_ParseTupleAndKeywords", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyCObject_AsVoidPtr", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_AsVoidPtr in fortranobject.o | |
| "_PyCObject_FromVoidPtr", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| _F2PyCapsule_FromVoidPtr in fortranobject.o | |
| "_PyCObject_Type", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyCapsule_Check in fortranobject.o | |
| "_PyComplex_FromDoubles", referenced from: | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| "_PyComplex_Type", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyDict_DelItemString", referenced from: | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_GetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| "_PyDict_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyDict_SetItemString", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _PyFortranObject_New in fortranobject.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyErr_Clear", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyErr_Format", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyErr_NewException", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyErr_Occurred", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| ... | |
| "_PyErr_Print", referenced from: | |
| _initflib in flibmodule.o | |
| _F2PyDict_SetItemString in fortranobject.o | |
| "_PyErr_SetString", referenced from: | |
| _initflib in flibmodule.o | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_PyEval_RestoreThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyEval_SaveThread", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| _f2py_rout_flib_sn_like in flibmodule.o | |
| _f2py_rout_flib_rskewnorm in flibmodule.o | |
| ... | |
| "_PyExc_AttributeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_setattr in fortranobject.o | |
| "_PyExc_ImportError", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyExc_MemoryError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| "_PyExc_RuntimeError", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_call in fortranobject.o | |
| "_PyExc_TypeError", referenced from: | |
| _fortran_call in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyExc_ValueError", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyFloat_Type", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyImport_ImportModule", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyMem_Free", referenced from: | |
| _fortran_dealloc in fortranobject.o | |
| "_PyModule_GetDict", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyNumber_Float", referenced from: | |
| _double_from_pyobj in flibmodule.o | |
| "_PyNumber_Int", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| "_PyObject_GetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _fortran_repr in fortranobject.o | |
| "_PyObject_IsTrue", referenced from: | |
| _f2py_rout_flib_constrain in flibmodule.o | |
| "_PyObject_SetAttrString", referenced from: | |
| _initflib in flibmodule.o | |
| "_PyObject_Str", referenced from: | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyObject_Type", referenced from: | |
| _array_from_pyobj in fortranobject.o | |
| "_PySequence_Check", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PySequence_GetItem", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| "_PyString_AsString", referenced from: | |
| _fortran_repr in fortranobject.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyString_ConcatAndDel", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_PyString_FromFormat", referenced from: | |
| _fortran_repr in fortranobject.o | |
| "_PyString_FromString", referenced from: | |
| _initflib in flibmodule.o | |
| _fortran_getattr in fortranobject.o | |
| _fortran_repr in fortranobject.o | |
| "_PyType_IsSubtype", referenced from: | |
| _int_from_pyobj in flibmodule.o | |
| _double_from_pyobj in flibmodule.o | |
| _string_from_pyobj in flibmodule.o | |
| _array_from_pyobj in fortranobject.o | |
| "_PyType_Type", referenced from: | |
| _initflib in flibmodule.o | |
| "_Py_BuildValue", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| "_Py_FindMethod", referenced from: | |
| _fortran_getattr in fortranobject.o | |
| "_Py_InitModule4_64", referenced from: | |
| _initflib in flibmodule.o | |
| "__PyObject_New", referenced from: | |
| _PyFortranObject_New in fortranobject.o | |
| _PyFortranObject_NewAsAttr in fortranobject.o | |
| "__Py_NoneStruct", referenced from: | |
| _f2py_rout_flib_symmetrize in flibmodule.o | |
| _f2py_rout_flib_logsum in flibmodule.o | |
| _f2py_rout_flib_logsum_cpx in flibmodule.o | |
| _f2py_rout_flib_combinationln in flibmodule.o | |
| _f2py_rout_flib_expand_triangular in flibmodule.o | |
| _f2py_rout_flib_mod_to_circle in flibmodule.o | |
| _f2py_rout_flib_standardize in flibmodule.o | |
| ... | |
| ld: symbol(s) not found for architecture x86_64 | |
| collect2: error: ld returned 1 exit status | |
| error: Command "/usr/local/bin/gfortran -Wall -L/usr/local/opt/zlib/lib build/temp.macosx-10.5-x86_64-2.7/cephes/i0.o build/temp.macosx-10.5-x86_64-2.7/cephes/c2f.o build/temp.macosx-10.5-x86_64-2.7/cephes/chbevl.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flibmodule.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/fortranobject.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib.o build/temp.macosx-10.5-x86_64-2.7/pymc/histogram.o build/temp.macosx-10.5-x86_64-2.7/pymc/flib_blas.o build/temp.macosx-10.5-x86_64-2.7/pymc/blas_wrap.o build/temp.macosx-10.5-x86_64-2.7/pymc/math.o build/temp.macosx-10.5-x86_64-2.7/pymc/gibbsit.o build/temp.macosx-10.5-x86_64-2.7/build/src.macosx-10.5-x86_64-2.7/pymc/flib-f2pywrappers.o -L/usr/local/Cellar/gfortran/4.7.2/gfortran/lib/gcc/x86_64-apple-darwin12.2.0/4.7.2 -lgfortran -o build/lib.macosx-10.5-x86_64-2.7/pymc/flib.so -Wl,-framework -Wl,Accelerate" failed with exit status 1 | |
| ---------------------------------------- | |
| Cleaning up... | |
| Command //anaconda/bin/python -c "import setuptools;__file__='/private/var/folders/6l/83vj6nxn6g1b6l2c9ycym4hc0000gn/T/pip_build_olga/pymc/setup.py';exec(compile(open(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /var/folders/6l/83vj6nxn6g1b6l2c9ycym4hc0000gn/T/pip-f6keEp-record/install-record.txt --single-version-externally-managed failed with error code 1 in /private/var/folders/6l/83vj6nxn6g1b6l2c9ycym4hc0000gn/T/pip_build_olga/pymc | |
| Storing complete log in /Users/olga/.pip/pip.log | |
| Olgas-MacBook-Pro-1378:~ olga$ |
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