Created
January 13, 2012 03:37
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Submitting BFAST via Condor on OSG
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universe=vanilla | |
executable=/home/oweidner/software/bfast/bin/bfast | |
transfer_executable=True | |
when_to_transfer_output = ON_EXIT | |
transfer_input_files=/home/oweidner/software/bfast/data/small/reference/hg_2122.fa,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.10.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.1.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.2.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.3.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.4.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.5.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.6.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.7.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.8.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.9.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.brg,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.nt.brg,/home/oweidner/software/bfast/data/small/reads_5K/reads.10.fastq | |
Arguments = match -r reads.10.fastq -A 1 -f hg_2122.fa | |
+Owner=Undefined | |
log=my_log.file | |
output=my_out.$(Cluster).$(Process) | |
error=my_err.$(Cluster).$(Process) | |
notification=Never | |
queue |
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