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| # Run model simulation with given values for: | |
| # initial cull, maintenance cull, cell target density, allocated budget, | |
| # area to cull, and "control area" (area for which proportional population is calculated) | |
| # (last two are kept separate for the spatial optimisation, where we may choose to cull a subset | |
| # of the target control area for efficiency) | |
| run.sim = function(curr.init.cull, curr.maint.cull, curr.target.density, budget, C.mask, ctrl.mask) | |
| { | |
| Nx = ncol(K); Ny = nrow(K); # gauge size of map | |
| IC = K # note - initial population is set to carrying capacity |
| ### Plot length summary | |
| data=read.csv("plotBAincr.csv",stringsAsFactors=F) | |
| data$Date.start=as.Date(data$Date.start) | |
| data$Date.end=as.Date(data$Date.end) | |
| plotlist=unique(data$Plot) | |
| out_frame=data.frame(Plot="",Date.start="",Date.end="",length=0,stringsAsFactors=F) |