nextflow_BKV_samtools_bam_mem_error

$ nextflow run nf-core/rnaseq -profile docker --aligner hisat2 -r 1.4.2 --reads 'data/*_{1,2}_10k.fastq' --reverseStranded --max_cpus 6 --max_memory 32 -c config_bkv.txt 
NOTE: Nextflow is not tested with Java 13.0.2 -- It's recommended the use of version 8 up to 12

N E X T F L O W  ~  version 20.01.0
Launching `nf-core/rnaseq` [nostalgic_solvay] - revision: 3b6df9bd10 [1.4.2]
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        ___     __   __   __   ___     /,-._.--~'
  |\ | |__  __ /  ` /  \ |__) |__         }  {
  | \| |       \__, \__/ |  \ |___     \`-._,-`-,
                                        `._,._,'
  nf-core/rnaseq v1.4.2
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Pipeline Release  : 1.4.2
Run Name          : nostalgic_solvay
Reads             : data/*_{1,2}_10k.fastq
Data Type         : Paired-End
Strandedness      : Reverse
Trimming          : 5'R1: 0 / 5'R2: 0 / 3'R1: 0 / 3'R2: 0 / NextSeq Trim: 0
Aligner           : HISAT2
Fasta Ref         : refs/bkv.fa
GTF Annotation    : refs/GCF_000837865.1_ViralProj14074_genomic.gtf
Remove Ribosomal RNA: false
Biotype GTF field : gene_biotype
Save prefs        : Ref Genome: No / Trimmed FastQ: No / Alignment intermediates: No
Max Resources     : 32 memory, 6 cpus, 10d time per job
Container         : docker - nfcore/rnaseq:1.4.2
Output dir        : ./results
Launch dir        : /Users/pgc92/projects/nextflow_nfcore_rnaseq/bkv
Working dir       : /Users/pgc92/projects/nextflow_nfcore_rnaseq/bkv/work
Script dir        : /Users/pgc92/.nextflow/assets/nf-core/rnaseq
User              : pgc92
Config Profile    : docker
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executor >  local (9)
[44/b80885] process > get_software_versions [100%] 1 of 1 ✔
[23/1028e5] process > makeBED12             [100%] 1 of 1 ✔
[ac/b75022] process > makeHisatSplicesites  [100%] 1 of 1 ✔
[4c/51c4d2] process > makeHISATindex        [100%] 1 of 1 ✔
[5c/15cd5a] process > fastqc                [100%] 1 of 1 ✔
[25/9537dc] process > trim_galore           [100%] 1 of 1 ✔
[dc/e167cc] process > hisat2Align           [100%] 1 of 1 ✔
[85/1b49a2] process > hisat2_sortOutput     [100%] 1 of 1, failed: 1 ✘
[-        ] process > rseqc                 -
[-        ] process > preseq                -
[-        ] process > markDuplicates        -
[-        ] process > qualimap              -
[-        ] process > dupradar              -
[-        ] process > featureCounts         -
[-        ] process > merge_featureCounts   -
[-        ] process > stringtieFPKM         -
[-        ] process > sample_correlation    -
[-        ] process > multiqc               -
[30/9d40a3] process > output_documentation  [100%] 1 of 1 ✔
[HISAT2 index build] Available memory: 32 B
[HISAT2 index build] Less than 200 GB available, so NOT using splice sites and exons in HISAT2 index.
[HISAT2 index build] Use --hisat_build_memory [small number] to skip this check.
[0;35m[nf-core/rnaseq] Pipeline completed with errors
WARN: To render the execution DAG in the required format it is required to install Graphviz -- See http://www.graphviz.org for more info.
Error executing process > 'hisat2_sortOutput (SRR11074361_1_10k)'

Caused by:
  Process `hisat2_sortOutput (SRR11074361_1_10k)` terminated with an error exit status (1)

Command executed:

  samtools sort \
      SRR11074361_1_10k.bam \
      -@ 4 -m-1499999992 \
      -o SRR11074361_1_10k.sorted.bam
  samtools index SRR11074361_1_10k.sorted.bam

Command exit status:
  1

Command output:
  (empty)

Command error:
  samtools sort: couldn't allocate memory for bam_mem

Work dir:
  /Users/pgc92/projects/nextflow_nfcore_rnaseq/bkv/work/85/1b49a27565635a24e82d8dd1a5d9e6

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`