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April 18, 2021 12:09
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Sparse Interaction Terms for scikit-learn
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from sklearn.base import BaseEstimator, TransformerMixin | |
from scipy import sparse | |
from itertools import combinations | |
class SparseInteractions(BaseEstimator, TransformerMixin): | |
def __init__(self, degree=2, feature_name_separator="_"): | |
self.degree = degree | |
self.feature_name_separator = feature_name_separator | |
def fit(self, X, y=None): | |
return self | |
def transform(self, X): | |
if not sparse.isspmatrix_csc(X): | |
X = sparse.csc_matrix(X) | |
if hasattr(X, "columns"): | |
self.orig_col_names = X.columns | |
else: | |
self.orig_col_names = np.array([str(i) for i in range(X.shape[1])]) | |
spi = self._create_sparse_interactions(X) | |
return spi | |
def get_feature_names(self): | |
return self.feature_names | |
def _create_sparse_interactions(self, X): | |
out_mat = [] | |
self.feature_names = self.orig_col_names.tolist() | |
for sub_degree in range(2, self.degree + 1): | |
for col_ixs in combinations(range(X.shape[1]), sub_degree): | |
# add name for new column | |
name = self.feature_name_separator.join(self.orig_col_names[list(col_ixs)]) | |
self.feature_names.append(name) | |
# get column multiplications value | |
out = X[:, col_ixs[0]] | |
for j in col_ixs[1:]: | |
out = out.multiply(X[:, j]) | |
out_mat.append(out) | |
return sparse.hstack([X] + out_mat) | |
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Thanks for the code.
The script errors due to missing
import numpy as np
. Other than that the class has run fine in myPipeline
.