Created
April 2, 2012 11:48
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Calling into R (Rlib.so/Rlib.dylib) from the D programming language
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/** | |
A minimal example to use the random number generator of R (calling into Rlib.so from D) | |
dmd test_rlib.d ; ./test_rlib | |
It is a copy of the C code I wrote for BioLib | |
Pjotr Prins, 2012 | |
See the latest version at | |
https://github.com/pjotrp/qtlHD/blob/master/src/D/test/rlib/test_rlib.d | |
*/ | |
module test.rlib.test_rlib; | |
import std.algorithm; | |
import std.range; | |
import std.c.stdio; | |
import std.stdio; | |
import std.string; | |
import std.conv; | |
import std.c.stdlib; | |
pragma(lib, "R"); | |
extern (C) void Rf_initEmbeddedR(size_t argc, char **argv); | |
extern (C) void Rf_endEmbeddedR(size_t); | |
extern (C) void R_SaveGlobalEnv(); | |
extern(C){ | |
double norm_rand(); | |
double unif_rand(); | |
double exp_rand(); | |
void GetRNGstate(); | |
void PutRNGstate(); | |
} | |
/** | |
* Initialize the R interpreter | |
*/ | |
void R_Init() { | |
version(darwin) { // OSX | |
string args[] = [ "BiolibEmbeddedR", "--gui=none", "--silent", "--no-environ", "--no-site-file", "--no-init-file"]; | |
} else { | |
string args[] = [ "BiolibEmbeddedR", "--gui=none", "--silent", "--no-environ"]; | |
} | |
char *argv[]; | |
argv.length = args.length; | |
foreach (i, s ; args) { | |
argv[i] = cast(char *)toStringz(args[i]); | |
} | |
auto argc = args.length; | |
writeln("Initialize embedded R (library)"); | |
version(darwin) { | |
setenv("R_HOME","/Library/Frameworks/R.framework/Resources/", 1); | |
} else version(linux) { | |
setenv("R_HOME","/usr/lib/R",1); | |
} else { | |
throw new Exception("Can not find R libraries on this system"); | |
} | |
Rf_initEmbeddedR(argc, argv.ptr); | |
} | |
void R_Close() { | |
writeln("Shutting down R"); | |
PutRNGstate(); | |
R_SaveGlobalEnv(); | |
Rf_endEmbeddedR(0); | |
} | |
int main() | |
{ | |
R_Init(); | |
// call an Rlib function | |
GetRNGstate(); | |
writeln(" - norm_rand: " ~ to!string(norm_rand())); | |
writeln(" - norm_rand: " ~ to!string(norm_rand())); | |
writeln(" - norm_rand: " ~ to!string(norm_rand())); | |
writeln(" - unif_rand: " ~ to!string(unif_rand())); | |
writeln(" - unif_rand: " ~ to!string(unif_rand())); | |
writeln(" - unif_rand: " ~ to!string(unif_rand())); | |
R_Close(); | |
return 0; | |
} |
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