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@pwighton
Created December 7, 2021 20:43
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singularity run \
  --cleanenv \
  -B /autofs/cluster/gerenuk/pwighton/singularity-images/license.txt:/license.txt \
  -B /autofs/cluster/gerenuk/pwighton/fmriprep-singularity/ds003455:/data \
  --env FS_LICENSE='/license.txt' \
  /autofs/cluster/gerenuk/pwighton/singularity-images/fmriprep-20.2.0rc2.simg \
    /data \
    /data/derivatives2 \
    participant \
    --participant-label s001 \
    -w /data/work \
    --nthreads 4 \
    --fs-no-reconall \
    --output-space T1w
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