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import numpy as np | |
import warnings | |
from itertools import cycle, izip | |
from sklearn.utils import gen_even_slices | |
from sklearn.utils import shuffle | |
from sklearn.base import BaseEstimator | |
from sklearn.base import ClassifierMixin | |
from sklearn.preprocessing import LabelBinarizer |
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" VIM Configuration File | |
" Description: Optimized for C/C++ development, but useful also for other things. | |
" Author: Gerhard Gappmeier | |
" | |
" set UTF-8 encoding | |
set enc=utf-8 | |
set fenc=utf-8 | |
set termencoding=utf-8 | |
" disable vi compatibility (emulation of old bugs) |
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#!/usr/bin/env python | |
""" | |
simple example script for running and testing notebooks. | |
Usage: `ipnbdoctest.py foo.ipynb [bar.ipynb [...]]` | |
Each cell is submitted to the kernel, and the outputs are compared with those stored in the notebook. | |
""" | |
# License: Public Domain, but credit is nice (Min RK). |
#How to use blast from command-line, on Mac OS X.
Download executables (binary) of blast-commands for Mac OS X.
$ curl -O ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.2.28/ncbi-blast-2.2.28+.dmg
or
$ wget ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.2.28/ncbi-blast-2.2.28+.dmg
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###### | |
# author: Stefan McKinnon Edwards <[email protected]> | |
# id: $Id: qsub1.py 25 2013-04-12 11:06:47Z sme $ | |
# qsub-module; | |
# communicates with cluster-queueing system to retrieve information | |
# about the current job. | |
# The qsub commands do no exist on the nodes, so to retrieve the necessary information, | |
# we ssh the host and request the information from `qstat`. | |
# | |
# To use this module from a script running on a computation cluster, |
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# IPython magic to check for PEP8 compliance. | |
# Author: Juan Luis Cano <[email protected]> | |
"""IPython magic to check for PEP8 compliance. | |
To use it, type | |
```%load_ext pep8magic``` | |
and then |
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#!/usr/bin/python | |
# -*- coding: utf-8 -*- | |
import subprocess | |
__all__ = ["transform"] | |
__version__ = '0.3' | |
__author__ = 'Christoph Burgmer <[email protected]>' | |
__url__ = 'http://github.com/cburgmer/upsidedown' |
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import subprocess | |
process = subprocess.Popen(['git', 'rev-parse', 'HEAD'], shell=False, stdout=subprocess.PIPE) | |
git_head_hash = process.communicate()[0].strip() |
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