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CRAN dependencies for TwoSampleMR R package to install the binary packages on Ubuntu instead of compiling from source
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| #!/bin/bash | |
| sudo apt-get update -y && | |
| apt-get --with-new-pkgs upgrade -y && | |
| apt-get install -y gfortran \ | |
| libgmp-dev \ | |
| r-cran-ggplot2 \ | |
| r-cran-gridextra \ | |
| r-cran-cowplot \ | |
| r-cran-plyr \ | |
| r-cran-reshape2 \ | |
| r-cran-stringr \ | |
| r-cran-knitr \ | |
| r-cran-markdown \ | |
| r-cran-gtable \ | |
| r-cran-rmarkdown \ | |
| r-cran-mendelianrandomization \ | |
| r-cran-dplyr \ | |
| r-cran-psych \ | |
| r-cran-magrittr \ | |
| r-cran-car \ | |
| r-cran-randomforest \ | |
| r-cran-meta \ | |
| r-cran-data.table \ | |
| r-cran-glmnet \ | |
| r-cran-lattice \ | |
| r-cran-pbapply \ | |
| r-cran-mass \ | |
| r-cran-cairo \ | |
| r-cran-remotes && | |
| R -q -e "remotes::install_github('MRCIEU/TwoSampleMR')" |
Author
remlapmot
commented
Sep 8, 2021
- TwoSampleMR DESCRIPTION file is here
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