Python Bootstrap

pyinit.sh

#!/bin/bash
os=`uname`

# Python
if [[ "$os" == 'Linux' ]]; then
    apt-get install -y python python-pip python-dev #python3 python3-pip python3-dev
elif [[ "$os" == 'Darwin' ]]; then
    brew install python
fi

pip2 install --upgrade pip
pip2 install --upgrade virtualenv
#pip3 install --upgrade pip
#pip3 install --upgrade virtualenv
 
## Science 
### General
pip2 install -U numpy scipy "ipython[notebook]" 
#pip3 install -U numpy scipy "ipython[notebook]"

## Vis
pip2 install -U bokeh plotly lightning-python
 
## Machine Learning & NLP
#pip3 install -U nltk scikit-learn
pip2 install -U nltk scikit-learn
 
### Network Tools
#### NetworkX & iGraph
pip2 install -U igraph networkx
#pip3 install -U igraph networkx


### graph-tool
if [[ "$os" == 'Linux' ]]; then
    echo "deb http://downloads.skewed.de/apt/"$(lsb_release -sc)" "$(lsb_release -sc)" universe" | tee -a /etc/apt/sources.list
    echo "deb-src http://downloads.skewed.de/apt/"$(lsb_release -sc)" "$(lsb_release -sc)" universe" | tee -a /etc/apt/sources.list
    apt-key adv --keyserver hkp://keyserver.ubuntu.com:80 --recv 98507F25
    apt-get update
    apt-get install -y python-graph-tool #python3-graph-tool
elif [[ "$os" == 'Darwin' ]]; then
    brew install graph-tool
fi