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@richpsharp
Created March 13, 2020 19:09
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Build log from broken pgp build
root@6de621f3074a:/usr/local/pygeoprocessing# python setup.py install
running install
running bdist_egg
running egg_info
creating pygeoprocessing.egg-info
writing pygeoprocessing.egg-info/PKG-INFO
writing dependency_links to pygeoprocessing.egg-info/dependency_links.txt
writing requirements to pygeoprocessing.egg-info/requires.txt
writing top-level names to pygeoprocessing.egg-info/top_level.txt
writing manifest file 'pygeoprocessing.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.cpp' under directory 'src'
warning: no files found matching '*.pxd' under directory 'src'
writing manifest file 'pygeoprocessing.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib.linux-x86_64-3.6
creating build/lib.linux-x86_64-3.6/pygeoprocessing
copying src/pygeoprocessing/symbolic.py -> build/lib.linux-x86_64-3.6/pygeoprocessing
copying src/pygeoprocessing/__init__.py -> build/lib.linux-x86_64-3.6/pygeoprocessing
copying src/pygeoprocessing/geoprocessing.py -> build/lib.linux-x86_64-3.6/pygeoprocessing
creating build/lib.linux-x86_64-3.6/pygeoprocessing/routing
copying src/pygeoprocessing/routing/__init__.py -> build/lib.linux-x86_64-3.6/pygeoprocessing/routing
creating build/lib.linux-x86_64-3.6/pygeoprocessing/testing
copying src/pygeoprocessing/testing/__init__.py -> build/lib.linux-x86_64-3.6/pygeoprocessing/testing
copying src/pygeoprocessing/testing/utils.py -> build/lib.linux-x86_64-3.6/pygeoprocessing/testing
copying src/pygeoprocessing/testing/sampledata.py -> build/lib.linux-x86_64-3.6/pygeoprocessing/testing
copying src/pygeoprocessing/testing/scm.py -> build/lib.linux-x86_64-3.6/pygeoprocessing/testing
copying src/pygeoprocessing/testing/assertions.py -> build/lib.linux-x86_64-3.6/pygeoprocessing/testing
copying src/pygeoprocessing/FastFileIterator.h -> build/lib.linux-x86_64-3.6/pygeoprocessing
copying src/pygeoprocessing/geoprocessing_core.pyx -> build/lib.linux-x86_64-3.6/pygeoprocessing
copying src/pygeoprocessing/routing/LRUCache.h -> build/lib.linux-x86_64-3.6/pygeoprocessing/routing
copying src/pygeoprocessing/routing/routing.pyx -> build/lib.linux-x86_64-3.6/pygeoprocessing/routing
copying src/pygeoprocessing/routing/watershed.pyx -> build/lib.linux-x86_64-3.6/pygeoprocessing/routing
running build_ext
cythoning src/pygeoprocessing/routing/routing.pyx to src/pygeoprocessing/routing/routing.cpp
cythoning src/pygeoprocessing/routing/watershed.pyx to src/pygeoprocessing/routing/watershed.cpp
cythoning src/pygeoprocessing/geoprocessing_core.pyx to src/pygeoprocessing/geoprocessing_core.cpp
building 'pygeoprocessing.routing.routing' extension
creating build/temp.linux-x86_64-3.6
creating build/temp.linux-x86_64-3.6/src
creating build/temp.linux-x86_64-3.6/src/pygeoprocessing
creating build/temp.linux-x86_64-3.6/src/pygeoprocessing/routing
x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.6/dist-packages/numpy/core/include -Isrc/pygeoprocessing/routing -I/usr/include/python3.6m -c src/pygeoprocessing/routing/routing.cpp -o build/temp.linux-x86_64-3.6/src/pygeoprocessing/routing/routing.o
In file included from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832:0,
from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from src/pygeoprocessing/routing/routing.cpp:612:
/usr/local/lib/python3.6/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it with " \
^~~~~~~
x86_64-linux-gnu-gcc: internal compiler error: Killed (program cc1plus)
Please submit a full bug report,
with preprocessed source if appropriate.
See <file:///usr/share/doc/gcc-7/README.Bugs> for instructions.
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