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@rmrao
Created June 1, 2026 18:08
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abng_106_targets.tsv
# ESMFold2 vs AlphaFold3 antibody/nanobody-antigen docking benchmark
# 106 targets (50 antibody + 56 nanobody), bound complexes from NooriFatima/AF3_AbNb_Benchmark
# (Hitawala & Gray 2024). PDB_short = crystal PDB + Fv-copy index.
PDB_short protein_type n_chains folded_len
7q6c_0 antibody 3 601
7so5_0 antibody 3 970
7t17_0 antibody 3 625
7t7b_0 antibody 3 628
7tow_0 antibody 3 465
7tow_1 antibody 3 472
7tp3_0 antibody 3 639
7u0a_0 antibody 3 451
7u5b_1 antibody 3 583
7unb_1 antibody 3 582
7uvf_1 antibody 3 540
7uvh_1 antibody 3 604
7vaz_0 antibody 3 438
7vux_0 antibody 3 551
7woa_0 antibody 3 1492
7woa_1 antibody 3 1492
7wti_0 antibody 3 1327
7wti_1 antibody 3 1327
7x6a_0 antibody 3 1323
7x8p_0 antibody 3 553
7xy8_1 antibody 3 532
7yds_0 antibody 3 551
7yru_0 antibody 3 508
7zwi_1 antibody 3 561
7zxu_0 antibody 3 622
8c3v_1 antibody 3 633
8cii_1 antibody 3 617
8cin_0 antibody 3 1493
8d36_0 antibody 3 444
8d47_1 antibody 3 456
8d9y_0 antibody 3 500
8d9z_0 antibody 3 508
8da0_0 antibody 3 513
8da0_1 antibody 3 464
8da1_0 antibody 3 514
8dad_0 antibody 3 424
8dg9_0 antibody 3 669
8e6j_0 antibody 3 617
8f6l_0 antibody 3 537
8g3p_0 antibody 3 628
8gzz_0 antibody 3 427
8hc3_1 antibody 3 1461
8heb_0 antibody 3 1258
8i5h_1 antibody 3 619
8i5h_2 antibody 3 619
8j7t_0 antibody 3 719
8qrg_0 antibody 3 621
8r1d_0 antibody 3 1292
8sdg_1 antibody 3 620
8tbq_1 antibody 3 546
7nxx_0 nanobody 2 289
7sp8_0 nanobody 2 624
7sqp_0 nanobody 2 498
7sqp_1 nanobody 2 495
7srk_1 nanobody 2 495
7tpr_0 nanobody 2 1270
7tpr_1 nanobody 2 1277
7unz_0 nanobody 2 386
7unz_1 nanobody 2 382
7vke_0 nanobody 2 380
7wn0_0 nanobody 2 494
7wn1_0 nanobody 2 493
7x2j_0 nanobody 2 323
7x2l_0 nanobody 2 315
7x2m_0 nanobody 2 320
7x7e_0 nanobody 2 324
7z1c_0 nanobody 2 321
7z1x_1 nanobody 2 508
7zk1_0 nanobody 2 370
7zk1_1 nanobody 2 364
7zkz_1 nanobody 2 353
7zml_0 nanobody 2 571
7zmm_0 nanobody 2 568
7zw1_0 nanobody 2 443
8b17_0 nanobody 2 578
8b8i_0 nanobody 2 135
8be2_0 nanobody 2 565
8c3l_0 nanobody 2 170
8c3l_1 nanobody 2 170
8ce4_0 nanobody 2 329
8cxn_1 nanobody 2 1226
8cxn_2 nanobody 2 1226
8cxq_0 nanobody 2 1222
8cy6_0 nanobody 2 1222
8cy7_2 nanobody 2 1171
8cy9_0 nanobody 2 1221
8cyb_0 nanobody 2 1228
8cyd_0 nanobody 2 1221
8dqu_0 nanobody 2 205
8eln_1 nanobody 2 415
8emz_0 nanobody 2 433
8en3_0 nanobody 2 431
8g74_0 nanobody 2 1186
8gni_0 nanobody 2 605
8h3x_0 nanobody 2 481
8h3y_1 nanobody 2 474
8h5u_0 nanobody 2 308
8hxq_0 nanobody 2 163
8ido_0 nanobody 2 336
8ont_0 nanobody 2 558
8opr_0 nanobody 2 771
8opr_1 nanobody 2 776
8oud_0 nanobody 2 531
8pyr_0 nanobody 2 378
8qf5_0 nanobody 2 190
8sk5_0 nanobody 2 327
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