my latexmk configuration

.latexmkrc

$pdflatex='pdflatex -interaction=nonstopmode';
$pdf_previewer = "start zathura";
$pdf_update_method=0;
$pdf_mode = 1;
$dvi_mode = 0;
$preview_continuous_mode = 1;



add_cus_dep('glo', 'gls', 0, 'run_makeglossaries');
add_cus_dep('acn', 'acr', 0, 'run_makeglossaries');

sub run_makeglossaries {
  if ( $silent ) {
    system "makeglossaries -q '$_[0]'";
  }
  else {
    system "makeglossaries '$_[0]'";
  };
}



push @generated_exts, 'glo', 'gls', 'glg';
push @generated_exts, 'acn', 'acr', 'alg';
$clean_ext .= ' %R.ist %R.xdy';