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library(tidyverse) | |
library(scales) | |
# bc who column names are weird | |
parse_percentile <- function(x){ | |
x <- str_replace( x, "^P", "" ) | |
case_when( | |
x == "01" ~ .1, | |
x == "999" ~ 99.9, | |
TRUE ~ as.numeric(x) | |
) | |
} | |
url <- "http://www.who.int/childgrowth/standards/wfa_girls_p_exp.txt" | |
baby_girls_weight <- read_delim(url, delim = "\t" ) %>% | |
select( -(L:S) ) %>% | |
gather( percentile, weight, -Age) %>% | |
mutate( percentile = parse_percentile(percentile) ) | |
scale_color_gradient_mirror <- function (..., colors , | |
midpoint = 0, space = "Lab", na.value = "grey50", guide = "colourbar") { | |
cols <- c( head(colors, -1), tail( colors, 1), rev( head( colors, -1)) ) | |
continuous_scale("colour", "gradient2", | |
gradient_n_pal( cols ), | |
na.value = na.value, guide = guide, | |
..., rescaler = ggplot2:::mid_rescaler(mid = midpoint)) | |
} | |
ggplot( filter(baby_girls_weight, Age < 100) ) + | |
scale_color_gradient_mirror(midpoint=50, colors = c("pink", "purple", "blue") ) + | |
aes( Age, weight, color = percentile, group = percentile ) + | |
geom_line( ) + | |
xlab( "Days" ) + | |
ylab( "Weight (kg)") + | |
theme_light() + | |
geom_text( | |
data = filter(baby_girls_weight, Age == 100), | |
mapping = aes( Age + 2 , weight, label = percentile, color = NULL ), | |
size = 2 | |
) + | |
geom_text( | |
data = filter(baby_girls_weight, Age == 0), | |
mapping = aes( Age - 2 , weight, label = percentile, color = NULL ), | |
size = 2 | |
) + | |
guides(colour=FALSE) | |
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