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Last active January 10, 2023 06:29
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Force-directed layout
Raw
.block
license: gpl-3.0
height: 600
Raw
README.md

A force-directed layout with a circular bounding box. This graph shows interactions between characters in the Les Miserables Stanford GraphBase dataset. The size of each node indicates the number of chapters the character appeared in.

A good force-directed layouts can be useful for understanding high-level network structure, identifying clusters and outliers, examining links that connect nodes, and following paths between nodes. However, when graphs are dense or very large, force-directed layouts can produce "hairball" visualizations that are difficult to read and understand.

Source for the parsed version of the data: https://github.com/rpgove/graphbase2json

Raw
index.html
<!DOCTYPE html>
<meta charset="utf-8">
<style>
.links line {
stroke: #999;
stroke-opacity: 0.6;
}
.nodes circle {
fill: #d62333;
stroke: #fff;
stroke-width: 2px;
}
</style>
<svg></svg>
<script src="https://d3js.org/d3.v4.min.js"></script>
<script>
var width = 960;
var height = 600;
var nodeRadius = d3.scaleSqrt().range([4, 10]);
var linkWidth = d3.scaleLinear().range([1, 2 * nodeRadius.range()[0]])
var padding = nodeRadius.range()[1] + 2;
var radius = Math.min(width - padding, height - padding)/2;
var drag = d3.drag()
.on('start', dragStart)
.on('drag', dragging)
.on('end', dragEnd);
var svg = d3.select('svg')
.attr('width', width)
.attr('height', height);
var forceSim = d3.forceSimulation()
.force('link', d3.forceLink().id(function(d) { return d.id; }))
.force('charge', d3.forceManyBody())
.force('center', d3.forceCenter(width/2, height/2));
d3.json('jean.json', function (error, graph) {
if (error) throw error;
// Make sure small nodes are drawn on top of larger nodes
graph.nodes.sort(function (a, b) { return b.chapters.length - a.chapters.length; });
nodeRadius.domain([graph.nodes[graph.nodes.length-1].chapters.length, graph.nodes[0].chapters.length]);
linkWidth.domain(d3.extent(graph.links, function (d) { return d.chapters.length; }));
var link = svg.append('g')
.attr('class', 'links')
.selectAll('line')
.data(graph.links)
.enter().append('line')
.attr('stroke-width', function (d) { return linkWidth(d.chapters.length); });
var node = svg.append('g')
.attr('class', 'nodes')
.selectAll('circle')
.data(graph.nodes)
.enter().append('circle')
.attr('r', function (d) { return nodeRadius(d.chapters.length); })
.call(drag);
node.append('title').text(function (d) { return d.name; });
forceSim.nodes(graph.nodes)
.on('tick', tick);
forceSim.force('link')
.links(graph.links)
function tick () {
link
.attr('x1', function (d) { return d.source.x; })
.attr('x2', function (d) { return d.target.x; })
.attr('y1', function (d) { return d.source.y; })
.attr('y2', function (d) { return d.target.y; });
node
.attr('cx', function (d) {
var dist = Math.sqrt((d.x - width/2) * (d.x - width/2) + (d.y - height/2) * (d.y - height/2));
if (dist > radius)
d.x = width/2 + (d.x - width/2) * radius/dist;
return d.x;
})
.attr('cy', function (d) {
var dist = Math.sqrt((d.x - width/2) * (d.x - width/2) + (d.y - height/2) * (d.y - height/2));
if (dist > radius)
d.y = height/2 + (d.y - height/2) * radius/dist;
return d.y;
});
}
});
function dragStart (d) {
if (!d3.event.active) forceSim.alphaTarget(0.3).restart();
d.fx = d.x;
d.fy = d.y;
}
function dragging (d) {
d.fx = d3.event.x;
d.fy = d3.event.y;
}
function dragEnd (d) {
if (!d3.event.active) forceSim.alphaTarget(0);
d.fx = null;
d.fy = null;
}
</script>
Raw
jean.json
{"nodes": [{"id": "TH", "chapters": ["1.4.1", "3.8.9", "5.9.4", "2.2.2", "5.3.3", "3.8.18", "3.8.19", "2.5.10", "3.8.12", "3.8.16", "3.8.17", "2.3.8", "2.3.9", "1.4.3", "2.3.2", "2.3.10", "3.8.8", "5.3.8", "3.8.6", "3.8.7", "3.8.4", "4.6.3", "4.8.4", "2.1.19", "5.6.1", "3.8.21", "3.8.20"], "name": "Th\\'enardier"}, {"id": "MN", "chapters": ["3.2.6", "4.6.1"], "name": "Magnon"}, {"id": "FT", "chapters": ["1.3.3", "1.3.2", "1.3.7", "3.6.6", "1.3.4", "1.3.8"], "name": "F\\'elix Tholomy\\`es"}, {"id": "BA", "chapters": ["4.12.6", "4.12.4", "4.12.3", "3.4.4", "4.14.1", "4.14.3", "3.4.1", "4.11.4", "4.11.5"], "name": "Bahorel"}, {"id": "BB", "chapters": ["3.8.21", "4.6.3", "3.8.20", "3.7.3", "4.8.4"], "name": "Babet"}, {"id": "BL", "chapters": ["1.3.3", "1.3.2", "1.3.8", "1.3.6", "1.3.4"], "name": "Blacheville"}, {"id": "BM", "chapters": ["1.7.10", "1.7.9", "1.5.12"], "name": "Monsieur Bamatabois"}, {"id": "JV", "chapters": ["5.1.24", "5.5.5", "5.5.4", "5.5.7", "5.5.8", "1.5.13", "3.8.18", "3.8.19", "1.6.1", "2.5.10", "3.8.14", "1.8.4", "2.3.10", "5.8.1", "2.8.8", "5.8.2", "4.5.2", "5.8.3", "5.3.11", "2.8.9", "5.3.10", "2.8.7", "2.8.6", "2.8.4", "2.8.1", "1.8.1", "4.3.7", "4.3.4", "4.3.5", "5.6.2", "1.8.2", "4.3.1", "4.3.8", "2.3.8", "1.2.11", "5.6.3", "1.7.11", "5.9.2", "4.3.2", "4.15.1", "4.15.2", "4.15.3", "5.8.4", "3.6.1", "3.6.2", "2.5.8", "3.8.9", "2.5.6", "2.2.1", "2.5.7", "2.5.4", "1.6.2", "5.3.4", "2.5.9", "5.3.2", "1.2.9", "5.3.9", "1.5.6", "1.5.1", "1.5.3", "1.5.2", "2.4.3", "2.4.2", "2.4.1", "4.9.1", "2.4.5", "2.4.4", "1.7.9", "1.7.8", "1.7.7", "1.8.5", "1.7.5", "1.7.4", "1.7.3", "1.7.2", "1.7.1", "1.8.3", "1.2.10", "2.3.9", "1.2.12", "1.2.13", "5.1.19", "5.1.18", "5.9.3", "1.7.10", "5.1.11", "2.3.6", "2.3.7", "1.2.6", "1.2.7", "1.2.4", "1.2.5", "1.2.3", "3.8.8", "5.3.8", "5.3.7", "5.3.6", "5.3.5", "2.5.5", "2.5.2", "2.5.3", "5.3.1", "2.5.1", "1.2.1", "5.1.9", "5.1.4", "5.1.6", "4.4.1", "4.4.2", "5.7.1", "5.9.5", "3.8.21", "3.8.20"], "name": "Jean Valjean"}, {"id": "BO", "chapters": ["3.4.2", "4.12.6", "3.4.1", "4.12.3", "4.12.2", "3.4.4", "5.1.14", "5.1.7", "5.1.11", "5.1.2", "4.14.1", "4.14.3", "4.14.5", "5.1.21", "3.8.15", "5.1.18"], "name": "Bossuet (Lesgle)"}, {"id": "JP", "chapters": ["4.12.6", "4.14.3", "3.4.1", "4.12.3", "4.12.8"], "name": "Jean Prouvaire"}, {"id": "BJ", "chapters": ["4.6.3", "4.8.4"], "name": "Brujon"}, {"id": "DA", "chapters": ["1.3.3", "1.3.9", "1.3.8", "1.3.6", "1.3.4"], "name": "Dahlia"}, {"id": "BT", "chapters": ["3.3.1", "3.3.3"], "name": "Baroness of T--"}, {"id": "BU", "chapters": ["3.1.8", "3.8.22"], "name": "Madame Burgon"}, {"id": "EN", "chapters": ["4.12.7", "4.12.6", "4.12.5", "4.12.4", "4.12.3", "5.1.21", "5.1.22", "5.1.23", "4.12.8", "4.1.6", "4.14.1", "4.14.3", "4.14.5", "5.1.19", "5.1.18", "5.1.14", "5.1.17", "5.1.11", "5.1.13", "5.1.12", "3.4.3", "3.4.1", "5.1.9", "5.1.8", "3.4.5", "5.1.5", "5.1.4", "5.1.7", "5.1.6", "5.1.3", "5.1.2"], "name": "Enjolras"}, {"id": "SP", "chapters": ["1.8.5", "1.7.1"], "name": "Sister Perp\\'etue"}, {"id": "FE", "chapters": ["4.12.6", "3.4.1", "4.12.3", "5.1.18", "5.1.21", "5.1.2", "4.14.1"], "name": "Feuilly"}, {"id": "BR", "chapters": ["1.7.11", "1.7.10"], "name": "Brevet"}, {"id": "BS", "chapters": ["5.2.3", "5.2.4"], "name": "Bruneseau"}, {"id": "JD", "chapters": ["3.1.8"], "name": "Jondrette"}, {"id": "ZE", "chapters": ["1.3.3", "1.3.9", "1.3.8", "1.3.4"], "name": "Zephine"}, {"id": "LI", "chapters": ["1.3.3", "1.3.2", "1.3.8", "1.3.4"], "name": "Listolier"}, {"id": "JA", "chapters": ["4.12.7", "5.4.1", "1.5.13", "1.5.12", "1.6.2", "4.14.3", "4.14.5", "2.5.10", "1.8.5", "4.15.1", "1.8.3", "5.1.19", "5.1.18", "1.5.5", "1.5.6", "1.8.4", "5.3.9", "5.3.3", "2.4.5", "5.3.11", "5.3.10", "5.1.6", "3.8.21", "3.8.20"], "name": "Javert"}, {"id": "BZ", "chapters": ["5.5.1", "2.2.2"], "name": "Boulatruelle"}, {"id": "GR", "chapters": ["2.8.7", "2.8.5"], "name": "Gribier"}, {"id": "FV", "chapters": ["1.3.3", "1.3.9", "1.3.8", "1.3.6", "1.3.4"], "name": "Favourite"}, {"id": "TM", "chapters": ["2.3.8", "1.4.1", "1.4.3", "2.3.9", "2.3.2", "2.3.3", "2.3.4", "3.8.18", "3.8.19", "4.6.1", "3.8.7", "3.8.12", "3.8.21", "3.8.20", "3.8.16", "3.8.17"], "name": "Madame Th\\'enardier"}, {"id": "LL", "chapters": ["2.4.3", "2.5.10", "2.4.5", "2.4.4"], "name": "Old woman 2"}, {"id": "GP", "chapters": ["3.3.2", "2.1.19", "3.3.4"], "name": "George Pontmercy"}, {"id": "TS", "chapters": ["4.5.3", "4.15.1"], "name": "Toussaint"}, {"id": "EP", "chapters": ["2.3.8", "4.14.6", "4.2.3", "3.8.7", "4.9.2", "4.11.6", "4.2.4", "3.8.11", "4.8.3", "4.8.4", "3.8.16"], "name": "Eponine"}, {"id": "XB", "chapters": ["5.1.16", "4.6.2"], "name": "Child 2"}, {"id": "MV", "chapters": ["3.2.8"], "name": "Madamoiselle Vaubois"}, {"id": "FN", "chapters": ["1.4.1", "1.5.9", "1.5.8", "1.5.10", "1.5.13", "1.5.12", "1.3.3", "1.8.5", "1.6.1", "1.7.1", "1.3.4", "1.8.4", "1.7.6", "1.3.9", "1.3.8", "1.8.1", "1.8.2", "1.8.3"], "name": "Fantine"}, {"id": "LP", "chapters": ["4.1.4", "4.1.3"], "name": "Louis Philippe"}, {"id": "JU", "chapters": ["1.7.11", "1.7.9", "1.7.10"], "name": "Judge of Douai"}, {"id": "NP", "chapters": ["1.1.1", "2.1.10", "2.1.8", "2.1.9", "2.1.7", "2.1.4"], "name": "Napoleon"}, {"id": "TG", "chapters": ["3.5.6", "3.2.8", "3.3.7", "4.5.1"], "name": "Lieutenant Theodule Gillenormand"}, {"id": "PO", "chapters": ["1.8.5", "1.7.4"], "name": "Old woman 1"}, {"id": "PL", "chapters": ["4.9.3", "3.5.4", "4.4.2"], "name": "Mother Plutarch"}, {"id": "PG", "chapters": ["1.2.13"], "name": "Petit Gervais"}, {"id": "SS", "chapters": ["1.7.6", "1.8.1", "1.7.1", "1.8.5"], "name": "Sister Simplice"}, {"id": "GU", "chapters": ["3.8.21", "4.6.3", "3.8.20", "3.7.3", "4.8.4"], "name": "Gueulemer"}, {"id": "CH", "chapters": ["1.7.11", "1.7.9", "1.7.10"], "name": "Champmathieu"}, {"id": "CO", "chapters": ["5.9.5", "2.5.6", "2.4.2", "4.8.3", "2.5.5", "5.5.4", "5.5.6", "4.3.4", "5.7.1", "4.3.5", "5.6.2", "5.8.1", "5.8.2", "5.8.3", "4.15.1", "2.3.8", "5.9.4", "1.4.3", "5.9.1", "2.3.1", "2.3.3", "2.3.4", "2.3.5", "2.3.6", "2.3.7", "2.4.4", "3.8.8", "2.4.3", "2.5.7", "2.5.4", "4.8.2", "2.5.2", "2.5.3", "2.4.5", "2.5.1", "4.5.1", "4.5.2", "4.5.3", "4.5.5", "4.5.6", "2.4.1", "2.8.4", "4.4.1", "4.3.6", "4.3.7", "3.6.2", "3.6.3", "4.8.6", "3.6.6", "5.6.1", "3.6.8", "5.1.10", "3.6.1", "4.8.1", "4.3.8"], "name": "Cosette"}, {"id": "CN", "chapters": ["1.7.11", "1.7.10"], "name": "Chenildieu"}, {"id": "CM", "chapters": ["4.12.6", "4.1.6", "3.4.1", "5.1.8", "3.4.5", "5.1.4", "5.1.7", "4.12.8", "4.14.1", "4.14.3", "4.11.4", "4.11.5", "5.1.21", "4.14.5", "5.1.2", "5.1.17", "5.1.18"], "name": "Combeferre"}, {"id": "CL", "chapters": ["1.1.4"], "name": "Countess de L\\^o"}, {"id": "CC", "chapters": ["1.7.11", "1.7.10"], "name": "Cochepaille"}, {"id": "VI", "chapters": ["1.5.9", "1.5.8"], "name": "Madame Victurnien"}, {"id": "IS", "chapters": ["1.2.6"], "name": "Isabeau"}, {"id": "XA", "chapters": ["5.1.16", "4.6.2"], "name": "Child 1"}, {"id": "MG", "chapters": ["5.5.4", "3.5.6", "3.3.1", "5.6.2", "3.3.2", "3.3.5", "3.3.7", "3.3.8", "3.2.8", "4.8.7"], "name": "Madamoiselle Gillenormand"}, {"id": "HL", "chapters": ["4.12.4", "4.12.2", "4.12.1"], "name": "Madame Hucheloup"}, {"id": "GG", "chapters": ["1.1.10"], "name": "G--"}, {"id": "GE", "chapters": ["1.1.4"], "name": "G\\'eborand"}, {"id": "GA", "chapters": ["4.12.7", "4.12.4", "4.12.3", "5.1.8", "5.1.15", "5.1.7", "3.1.8", "5.1.11", "4.14.3", "4.14.1", "4.11.1", "4.11.2", "4.11.3", "4.11.4", "4.14.7", "4.15.4", "4.14.5", "4.6.3", "4.6.2", "4.15.2", "3.8.22"], "name": "Gavroche"}, {"id": "CR", "chapters": ["4.12.6", "4.12.5", "4.12.4", "4.12.3", "5.1.21", "4.1.6", "4.14.1", "4.14.3", "4.14.5", "3.8.15", "5.1.18", "5.1.15", "5.1.14", "5.1.17", "5.1.13", "4.11.4", "4.11.5", "4.11.6", "4.8.3", "4.9.2", "3.4.2", "3.4.3", "3.4.1", "3.4.6", "3.4.5", "5.1.7", "5.1.2"], "name": "Courfeyrac"}, {"id": "QU", "chapters": ["4.12.8", "3.8.21", "3.8.20", "3.7.3", "4.8.4"], "name": "Claquesous"}, {"id": "AZ", "chapters": ["2.3.8", "3.8.16", "5.6.1"], "name": "Anzelma"}, {"id": "CV", "chapters": ["1.1.7"], "name": "Cravatte"}, {"id": "GI", "chapters": ["3.2.4", "5.5.3", "5.3.12", "5.5.6", "3.5.6", "3.2.3", "5.6.2", "3.3.1", "3.2.5", "3.2.6", "3.2.7", "3.3.5", "3.3.4", "3.2.2", "5.6.1", "3.3.8", "3.2.1", "3.2.8", "4.8.7", "5.5.4"], "name": "Monsieur Luke Esprit Gillenormand"}, {"id": "ME", "chapters": ["1.2.12", "1.1.2", "1.1.5", "1.1.4", "1.1.7", "1.1.6", "1.2.4", "1.2.5", "1.2.2", "1.2.3"], "name": "Madame Magloire"}, {"id": "JL", "chapters": ["1.2.1"], "name": "Jacquin Labarre"}, {"id": "FF", "chapters": ["1.5.6", "2.8.9", "2.8.8", "2.8.7", "1.5.7", "2.8.4", "2.8.3", "2.8.2", "2.8.1", "2.5.8", "2.5.9", "2.8.5"], "name": "Fauchelevent"}, {"id": "GT", "chapters": ["4.1.6", "3.4.1", "4.12.3", "4.12.2", "3.4.4", "5.1.23"], "name": "Grantaire"}, {"id": "MA", "chapters": ["4.13.3", "4.13.1", "5.1.21", "5.1.8", "5.1.24", "3.8.4", "5.3.7", "5.9.1", "5.6.2", "5.3.5", "5.6.1", "3.6.2", "4.3.6", "5.5.3", "5.5.2", "5.5.4", "5.5.7", "5.5.6", "5.5.8", "3.6.9", "5.7.1", "3.8.5", "5.3.2", "4.14.3", "3.3.2", "4.14.5", "4.14.4", "4.14.7", "4.14.6", "3.8.10", "3.3.5", "3.8.13", "3.8.14", "3.3.4", "5.9.5", "5.9.4", "5.1.19", "3.3.7", "5.3.1", "4.2.4", "4.8.6", "4.9.2", "3.4.6", "4.8.2", "3.8.11", "4.8.1", "5.3.6", "4.8.3", "5.3.4", "3.8.2", "3.8.3", "4.8.7", "3.8.1", "3.4.2", "3.4.3", "4.5.4", "5.3.12", "4.5.6", "3.4.5", "5.1.4", "3.5.3", "3.5.2", "3.5.1", "3.6.7", "3.3.1", "5.7.2", "4.2.1", "3.6.3", "3.6.4", "3.6.5", "3.6.6", "3.3.6", "3.6.8", "3.3.8", "3.6.1", "3.2.8", "3.3.3"], "name": "Marius"}, {"id": "MC", "chapters": ["1.1.4"], "name": "Marquis de Champtercier"}, {"id": "FA", "chapters": ["1.3.3", "1.3.2", "1.3.8", "1.3.4"], "name": "Fameuil"}, {"id": "MM", "chapters": ["4.2.3", "3.5.5", "3.5.4", "4.4.2", "4.14.1", "4.14.2", "3.3.5", "4.11.5", "4.9.3"], "name": "Monsieur Mabeuf"}, {"id": "MO", "chapters": ["4.8.4", "3.8.21", "4.6.2", "3.7.3", "4.4.2"], "name": "Montparnasse"}, {"id": "MB", "chapters": ["1.1.1", "1.1.2", "1.1.5", "1.1.4", "1.1.7", "1.1.9", "1.2.4", "1.2.2", "1.2.3"], "name": "Mademoiselle Baptistine"}, {"id": "MI", "chapters": ["2.8.3", "2.8.2", "2.6.7", "2.8.8"], "name": "Mother Innocent"}, {"id": "SN", "chapters": ["1.1.8", "1.1.14"], "name": "Count ***"}, {"id": "MT", "chapters": ["1.5.9", "1.5.10", "1.2.1"], "name": "Marguerite"}, {"id": "JO", "chapters": ["4.12.6", "3.4.1", "4.12.3", "4.12.2", "3.4.4", "5.1.21", "5.1.2", "4.14.1", "4.14.3"], "name": "Joly"}, {"id": "MP", "chapters": ["3.3.2", "3.2.8"], "name": "Madame Pontmercy"}, {"id": "MR", "chapters": ["1.2.1"], "name": "Madame de R--"}, {"id": "SC", "chapters": ["1.7.2"], "name": "Monsieur Scaufflaire"}, {"id": "MY", "chapters": ["1.1.1", "1.1.3", "1.1.2", "1.1.5", "1.1.4", "1.1.7", "1.1.6", "1.1.8", "1.2.12", "1.2.4", "1.2.5", "1.2.2", "1.2.3", "1.5.4", "1.1.11", "1.1.10", "1.1.13", "1.1.12", "1.1.14"], "name": "Monsieur Charles Fran\\c{c}ois Bienvenu 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