Physically simulated mesh deformation. This file handles the mesh updates.

DeformableMesh.cs

using System.Collections;
using System.Collections.Generic;
using System.Linq;
using UnityEngine;

[RequireComponent(typeof(GeneratePlaneMesh))]
public class DeformableMesh : MonoBehaviour {

    public float maximumDepression;
    public List<Vector3> originalVertices;
    public List<Vector3> modifiedVertices;

    private GeneratePlaneMesh plane;

    public void MeshRegenerated()
    {
        plane = GetComponent<GeneratePlaneMesh>();
        plane.mesh.MarkDynamic();
        originalVertices = plane.mesh.vertices.ToList();
        modifiedVertices = plane.mesh.vertices.ToList();
        Debug.Log("Mesh Regenerated");
    }

    public void AddDepression(Vector3 depressionPoint, float radius)
    {
        var worldPos4 = this.transform.worldToLocalMatrix * depressionPoint;
        var worldPos = new Vector3(worldPos4.x, worldPos4.y, worldPos4.z);
        for (int i = 0; i < modifiedVertices.Count; ++i)
        {
            var distance = (worldPos - (modifiedVertices[i] + Vector3.down * maximumDepression)).magnitude;
            if (distance < radius)
            {
                var newVert = originalVertices[i] + Vector3.down * maximumDepression;
                modifiedVertices.RemoveAt(i);
                modifiedVertices.Insert(i, newVert);
            }
        }

        plane.mesh.SetVertices(modifiedVertices);
        Debug.Log("Mesh Depressed");
    }
}

I think will work better with tessellating terrain deformation shader , I saw something here: https://www.youtube.com/watch?v=UVA5e_Yz2w4

Why does Unity swear at [RequireComponent (typeof (GeneratePlaneMesh))]?

Why does Unity swear at [RequireComponent (typeof (GeneratePlaneMesh))]?

Hello,
you probably need this one too:
https://gist.github.com/runewake2/b382ecd3abc3a32b096d08cc69c541fb
It needs another class. Any mesh custom class would do the trick.