Created
August 27, 2010 22:56
-
-
Save rwest/554340 to your computer and use it in GitHub Desktop.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
2010-08-27 18:21:32,733 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ chemicalTagger | |
2010-08-27 18:21:32,733 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ Input directory: /Users/rwest/XCodeProjects/PeterMurrayRust/patentData/../patentData | |
2010-08-27 18:21:32,733 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ listing files to generate: chemicalTagger ..filter.. org.xmlcml.cml.crystaleye.util.CrystaleyeUtil$3@56a47241 | |
2010-08-27 18:21:36,045 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ found potential sources: 7085 | |
2010-08-27 18:24:30,387 ERROR org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor @ Cannot parse with ANTLR: | |
org.antlr.runtime.tree.RewriteCardinalityException: rule oscarcm | |
at org.antlr.runtime.tree.RewriteRuleElementStream._next(RewriteRuleElementStream.java:165) | |
at org.antlr.runtime.tree.RewriteRuleElementStream.nextTree(RewriteRuleElementStream.java:145) | |
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.oscarCompound3(ChemicalChunkerParser.java:11430) | |
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.oscarCompound(ChemicalChunkerParser.java:10925) | |
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.noun(ChemicalChunkerParser.java:4657) | |
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.unmatchedTokens(ChemicalChunkerParser.java:998) | |
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.unmatchedPhrase(ChemicalChunkerParser.java:860) | |
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.sentences(ChemicalChunkerParser.java:536) | |
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.document(ChemicalChunkerParser.java:407) | |
at uk.ac.cam.ch.wwmm.chemicaltagger.ChemistrySentenceParser.parseTags(ChemistrySentenceParser.java:90) | |
at org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor.createTagged(ChemicalTaggerVisitor.java:95) | |
at org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor.createTagged(ChemicalTaggerVisitor.java:74) | |
at org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor.createOutputDocument(ChemicalTaggerVisitor.java:39) | |
at org.xmlcml.cml.crystaleye.KillableThread.run(AbstractCrystaleyeVisitor.java:746) | |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment