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@rwest
Created August 27, 2010 22:56
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2010-08-27 18:21:32,733 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ chemicalTagger
2010-08-27 18:21:32,733 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ Input directory: /Users/rwest/XCodeProjects/PeterMurrayRust/patentData/../patentData
2010-08-27 18:21:32,733 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ listing files to generate: chemicalTagger ..filter.. org.xmlcml.cml.crystaleye.util.CrystaleyeUtil$3@56a47241
2010-08-27 18:21:36,045 INFO org.xmlcml.cml.crystaleye.AbstractCrystaleyeVisitor @ found potential sources: 7085
2010-08-27 18:24:30,387 ERROR org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor @ Cannot parse with ANTLR:
org.antlr.runtime.tree.RewriteCardinalityException: rule oscarcm
at org.antlr.runtime.tree.RewriteRuleElementStream._next(RewriteRuleElementStream.java:165)
at org.antlr.runtime.tree.RewriteRuleElementStream.nextTree(RewriteRuleElementStream.java:145)
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.oscarCompound3(ChemicalChunkerParser.java:11430)
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.oscarCompound(ChemicalChunkerParser.java:10925)
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.noun(ChemicalChunkerParser.java:4657)
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.unmatchedTokens(ChemicalChunkerParser.java:998)
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.unmatchedPhrase(ChemicalChunkerParser.java:860)
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.sentences(ChemicalChunkerParser.java:536)
at uk.ac.cam.ch.wwmm.pregenerated.ChemicalChunkerParser.document(ChemicalChunkerParser.java:407)
at uk.ac.cam.ch.wwmm.chemicaltagger.ChemistrySentenceParser.parseTags(ChemistrySentenceParser.java:90)
at org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor.createTagged(ChemicalTaggerVisitor.java:95)
at org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor.createTagged(ChemicalTaggerVisitor.java:74)
at org.xmlcml.cml.crystaleye.supptext.ChemicalTaggerVisitor.createOutputDocument(ChemicalTaggerVisitor.java:39)
at org.xmlcml.cml.crystaleye.KillableThread.run(AbstractCrystaleyeVisitor.java:746)
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