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## Makefile for downloading the source code and building
## a binary package of R-INLA
##
## Run 'make' with no arguments for usage instructions
##
## This Makefile has been tested under Ubuntu 17.10
##
## Requirements:
##   mercurial
##   A full gcc/g++/gfortran installation

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#===============================================================================
# SuiteSparse_config.mk:  common configuration file for the SuiteSparse
#===============================================================================

# This file contains all configuration settings for all packages authored or
# co-authored by Tim Davis:
#
# Package Version       Description
# ------- -------       -----------
# AMD     1.2 or later  approximate minimum degree ordering

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/* ========================================================================== */
/* === Supernodal/cholmod_super_numeric ===================================== */
/* ========================================================================== */

/* -----------------------------------------------------------------------------
 * CHOLMOD/Supernodal Module.  Copyright (C) 2005-2006, Timothy A. Davis
 * The CHOLMOD/Supernodal Module is licensed under Version 2.0 of the GNU
 * General Public License.  See gpl.txt for a text of the license.
 * CHOLMOD is also available under other licenses; contact authors for details.
 * http://www.suitesparse.com

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/* ========================================================================== */
/* === Supernodal/cholmod_super_symbolic ==================================== */
/* ========================================================================== */

/* -----------------------------------------------------------------------------
 * CHOLMOD/Supernodal Module. Copyright (C) 2005-2006, Timothy A. Davis
 * The CHOLMOD/Supernodal Module is licensed under Version 2.0 of the GNU
 * General Public License.  See gpl.txt for a text of the license.
 * CHOLMOD is also available under other licenses; contact authors for details.
 * http://www.suitesparse.com

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## this script can be used to run really large models easily in order to test limits in SuiteSparse, Matrix, TMB, and INLA
## it loads simulated data created over all africa and all years

#############################################
## setup the environment for singularity R ##
#############################################

## Set core_repo location and tmb_repo loc
core_repo <- sprintf('/share/code/geospatial/lbd_core/')
tmb_repo  <- sprintf('/home/j/temp/azimmer/suitesparse_overloader')

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