riboHMM_env.yaml

name: ribohmm
channels:
  - conda-forge
  - bioconda
  - r
  - defaults
dependencies:
  - bcftools=1.9=h4da6232_0
  - htslib=1.9=hc238db4_4
  - libdeflate=1.0=h470a237_0
  - pysam=0.15.1=py36h0380709_0
  - samtools=1.9=h8ee4bcc_1
  - blas=1.1=openblas
  - bzip2=1.0.6=h470a237_2
  - ca-certificates=2018.11.29=ha4d7672_0
  - certifi=2018.11.29=py36_1000
  - curl=7.62.0=h74213dd_0
  - cvxopt=1.2.0=py36_blas_openblash48ca908_203
  - cython=0.29.1=py36hfc679d8_0
  - dsdp=5.8=blas_openblash470a237_201
  - fftw=3.3.8=h470a237_1
  - glpk=4.65=h16a7912_1
  - gmp=6.1.2=hfc679d8_0
  - gsl=2.2.1=blas_openblas_4
  - krb5=1.16.2=hbb41f41_0
  - libcurl=7.62.0=hbdb9355_0
  - libedit=3.1.20170329=haf1bffa_1
  - libffi=3.2.1=hfc679d8_5
  - libgcc-ng=7.2.0=hdf63c60_3
  - libgfortran=3.0.0=1
  - libssh2=1.8.0=h5b517e9_3
  - libstdcxx-ng=7.2.0=hdf63c60_3
  - metis=5.1.0=hfc679d8_3
  - ncurses=6.1=hfc679d8_1
  - numpy=1.15.1=py36_blas_openblashd3ea46f_0
  - openblas=0.2.20=8
  - openssl=1.0.2p=h470a237_1
  - pip=18.1=py36_1000
  - python=3.6.7=h5001a0f_1
  - readline=7.0=haf1bffa_1
  - scipy=1.1.0=py36_blas_openblash7943236_201
  - setuptools=40.6.2=py36_0
  - sqlite=3.26.0=hb1c47c0_0
  - suitesparse=4.5.6=blas_openblash55dcaef_201
  - tbb=2019.2=h2d50403_0
  - tk=8.6.9=ha92aebf_0
  - wheel=0.32.3=py36_0
  - xz=5.2.4=h470a237_1
  - zlib=1.2.11=h470a237_3
  - pip:
    - yapf==0.25.0
prefix: /home/cmb-panasas2/skchoudh/software_frozen/anaconda27/envs/ribohmm