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satra/environ_as_entities.provn

Created November 10, 2012 21:17
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Nipype PROV comparison
Raw
environ_as_entities.provn
bundle
prefix foaf <http://xmlns.com/foaf/0.1/>
prefix nipype <http://nipy.org/nipype/terms/0.6>
prefix dcterms <http://purl.org/dc/terms/>
activity(nipype:d21d596e2e0b11e2a1c714109fcf6ae7, 2012-11-14T03:31:39.567795, 2012-11-14T03:31:47.918502, [nipype:command="bet struct.nii /software/temp/nipype-tutorial/temp/provenance/struct_brain.nii.gz", prov:label="BET", prov:type='nipype:BET', nipype:working_directory="/software/temp/nipype-tutorial/temp/provenance", nipype:command_path="/usr/local/fsl/bin/bet", nipype:return_code=0, nipype:platform="Darwin-12.2.0-x86_64-i386-64bit", nipype:dependencies="/usr/local/fsl/bin/bet: is not an object file", nipype:duration="0.0" %% xsd:float, foaf:host="warpspeed.local"])
collection(nipype:d21e243a2e0b11e2914a14109fcf6ae7, [prov:type='nipype:environment'])
used(nipype:d21d596e2e0b11e2a1c714109fcf6ae7, nipype:d21e243a2e0b11e2914a14109fcf6ae7, -)
entity(nipype:d21e2aeb2e0b11e2884f14109fcf6ae7, [prov:type='nipype:environment', nipype:ANTSPATH="/software/ANTSbin/bf4d983/", prov:label="ANTSPATH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e2aeb2e0b11e2884f14109fcf6ae7)
entity(nipype:d21e2f7a2e0b11e29b0e14109fcf6ae7, [prov:type='nipype:environment', nipype:Apple_PubSub_Socket_Render="/tmp/launch-dRHB8R/Render", prov:label="Apple_PubSub_Socket_Render"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e2f7a2e0b11e29b0e14109fcf6ae7)
entity(nipype:d21e32d72e0b11e2ae2014109fcf6ae7, [prov:type='nipype:environment', nipype:Apple_Ubiquity_Message="/tmp/launch-1myPfP/Apple_Ubiquity_Message", prov:label="Apple_Ubiquity_Message"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e32d72e0b11e2ae2014109fcf6ae7)
entity(nipype:d21e36352e0b11e29ecf14109fcf6ae7, [prov:type='nipype:environment', nipype:CAMINOPATH="/software/camino/bin", prov:label="CAMINOPATH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e36352e0b11e29ecf14109fcf6ae7)
entity(nipype:d21e39682e0b11e2b66414109fcf6ae7, [prov:type='nipype:environment', nipype:CLASSPATH="/Users/satra/local/jar/MINE.jar:/Users/satra/local/jar/commons-io-2.3.jar", prov:label="CLASSPATH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e39682e0b11e2b66414109fcf6ae7)
entity(nipype:d21e3cba2e0b11e2999e14109fcf6ae7, [prov:type='nipype:environment', nipype:COMMAND_MODE="unix2003", prov:label="COMMAND_MODE"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e3cba2e0b11e2999e14109fcf6ae7)
entity(nipype:d21e401e2e0b11e2bb1314109fcf6ae7, [prov:type='nipype:environment', nipype:DISPLAY=":1", prov:label="DISPLAY"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e401e2e0b11e2bb1314109fcf6ae7)
entity(nipype:d21e43ca2e0b11e2997914109fcf6ae7, [prov:type='nipype:environment', nipype:DYLD_LIBRARY_PATH="/usr/local/cuda/lib:/usr/local/lib/vtk-5.10/", prov:label="DYLD_LIBRARY_PATH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e43ca2e0b11e2997914109fcf6ae7)
entity(nipype:d21e46e32e0b11e2963d14109fcf6ae7, [prov:type='nipype:environment', nipype:FIX_VERTEX_AREA="", prov:label="FIX_VERTEX_AREA"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e46e32e0b11e2963d14109fcf6ae7)
entity(nipype:d21e4a172e0b11e2a3bf14109fcf6ae7, [prov:type='nipype:environment', nipype:FMRI_ANALYSIS_DIR="/Applications/freesurfer/fsfast", prov:label="FMRI_ANALYSIS_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e4a172e0b11e2a3bf14109fcf6ae7)
entity(nipype:d21e4d192e0b11e29bf214109fcf6ae7, [prov:type='nipype:environment', nipype:FREESURFER_HOME="/Applications/freesurfer", prov:label="FREESURFER_HOME"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e4d192e0b11e29bf214109fcf6ae7)
entity(nipype:d21e50402e0b11e29b6314109fcf6ae7, [prov:type='nipype:environment', nipype:FSFAST_HOME="/Applications/freesurfer/fsfast", prov:label="FSFAST_HOME"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e50402e0b11e29b6314109fcf6ae7)
entity(nipype:d21e53422e0b11e2af8614109fcf6ae7, [prov:type='nipype:environment', nipype:FSF_OUTPUT_FORMAT="nii.gz", prov:label="FSF_OUTPUT_FORMAT"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e53422e0b11e2af8614109fcf6ae7)
entity(nipype:d21e566e2e0b11e2be2014109fcf6ae7, [prov:type='nipype:environment', nipype:FSLCONFDIR="/usr/local/fsl/config", prov:label="FSLCONFDIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e566e2e0b11e2be2014109fcf6ae7)
entity(nipype:d21e59ab2e0b11e2aeb914109fcf6ae7, [prov:type='nipype:environment', nipype:FSLDIR="/usr/local/fsl", prov:label="FSLDIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e59ab2e0b11e2aeb914109fcf6ae7)
entity(nipype:d21e5cd72e0b11e2a57814109fcf6ae7, [prov:type='nipype:environment', nipype:FSLLOCKDIR="", prov:label="FSLLOCKDIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e5cd72e0b11e2a57814109fcf6ae7)
entity(nipype:d21e5fd92e0b11e2a1a314109fcf6ae7, [prov:type='nipype:environment', nipype:FSLMACHINELIST="", prov:label="FSLMACHINELIST"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e5fd92e0b11e2a1a314109fcf6ae7)
entity(nipype:d21e62ee2e0b11e2954514109fcf6ae7, [prov:type='nipype:environment', nipype:FSLMACHTYPE="apple-darwin11-gcc4.2", prov:label="FSLMACHTYPE"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e62ee2e0b11e2954514109fcf6ae7)
entity(nipype:d21e66542e0b11e2a0e214109fcf6ae7, [prov:type='nipype:environment', nipype:FSLMULTIFILEQUIT="TRUE", prov:label="FSLMULTIFILEQUIT"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e66542e0b11e2a0e214109fcf6ae7)
entity(nipype:d21e69572e0b11e28f6f14109fcf6ae7, [prov:type='nipype:environment', nipype:FSLOUTPUTTYPE="NIFTI_GZ", prov:label="FSLOUTPUTTYPE"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e69572e0b11e28f6f14109fcf6ae7)
entity(nipype:d21e6ca82e0b11e2842214109fcf6ae7, [prov:type='nipype:environment', nipype:FSLREMOTECALL="", prov:label="FSLREMOTECALL"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e6ca82e0b11e2842214109fcf6ae7)
entity(nipype:d21e739c2e0b11e28dd614109fcf6ae7, [prov:type='nipype:environment', nipype:FSLTCLSH="/usr/local/fsl/bin/fsltclsh", prov:label="FSLTCLSH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e739c2e0b11e28dd614109fcf6ae7)
entity(nipype:d21e76bd2e0b11e2b6cd14109fcf6ae7, [prov:type='nipype:environment', nipype:FSLWISH="/usr/local/fsl/bin/fslwish", prov:label="FSLWISH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e76bd2e0b11e2b6cd14109fcf6ae7)
entity(nipype:d21e7a232e0b11e2b93414109fcf6ae7, [prov:type='nipype:environment', nipype:FSL_BIN="/usr/local/fsl/bin", prov:label="FSL_BIN"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e7a232e0b11e2b93414109fcf6ae7)
entity(nipype:d21e7d422e0b11e280ec14109fcf6ae7, [prov:type='nipype:environment', nipype:FSL_DIR="/usr/local/fsl", prov:label="FSL_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e7d422e0b11e280ec14109fcf6ae7)
entity(nipype:d21e80752e0b11e28f0114109fcf6ae7, [prov:type='nipype:environment', nipype:FS_OVERRIDE="0", prov:label="FS_OVERRIDE"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e80752e0b11e28f0114109fcf6ae7)
entity(nipype:d21e83782e0b11e290d014109fcf6ae7, [prov:type='nipype:environment', nipype:FUNCTIONALS_DIR="/Applications/freesurfer/sessions", prov:label="FUNCTIONALS_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e83782e0b11e290d014109fcf6ae7)
entity(nipype:d21e86a12e0b11e2b71214109fcf6ae7, [prov:type='nipype:environment', nipype:HOME="/Users/satra", prov:label="HOME"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e86a12e0b11e2b71214109fcf6ae7)
entity(nipype:d21e89a32e0b11e2835914109fcf6ae7, [prov:type='nipype:environment', nipype:LANG="en_US.UTF-8", prov:label="LANG"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e89a32e0b11e2835914109fcf6ae7)
entity(nipype:d21e8d142e0b11e285d714109fcf6ae7, [prov:type='nipype:environment', nipype:LOCAL_DIR="/Applications/freesurfer/local", prov:label="LOCAL_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e8d142e0b11e285d714109fcf6ae7)
entity(nipype:d21e900c2e0b11e2badd14109fcf6ae7, [prov:type='nipype:environment', nipype:LOGNAME="satra", prov:label="LOGNAME"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e900c2e0b11e2badd14109fcf6ae7)
entity(nipype:d21e932b2e0b11e285b614109fcf6ae7, [prov:type='nipype:environment', nipype:MINC_BIN_DIR="/Applications/freesurfer/mni/bin", prov:label="MINC_BIN_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e932b2e0b11e285b614109fcf6ae7)
entity(nipype:d21e964c2e0b11e2a42714109fcf6ae7, [prov:type='nipype:environment', nipype:MINC_LIB_DIR="/Applications/freesurfer/mni/lib", prov:label="MINC_LIB_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e964c2e0b11e2a42714109fcf6ae7)
entity(nipype:d21e994f2e0b11e285f214109fcf6ae7, [prov:type='nipype:environment', nipype:MKL_NUM_THREADS="4", prov:label="MKL_NUM_THREADS"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e994f2e0b11e285f214109fcf6ae7)
entity(nipype:d21e9c6e2e0b11e2a85014109fcf6ae7, [prov:type='nipype:environment', nipype:MNI_DATAPATH="/Applications/freesurfer/mni/data", prov:label="MNI_DATAPATH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e9c6e2e0b11e2a85014109fcf6ae7)
entity(nipype:d21e9fca2e0b11e28b9314109fcf6ae7, [prov:type='nipype:environment', nipype:MNI_DIR="/Applications/freesurfer/mni", prov:label="MNI_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21e9fca2e0b11e28b9314109fcf6ae7)
entity(nipype:d21ea3302e0b11e2bd0714109fcf6ae7, [prov:type='nipype:environment', nipype:MNI_PERL5LIB="/Applications/freesurfer/mni/lib/../System/Library/Perl/5.8.6", prov:label="MNI_PERL5LIB"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ea3302e0b11e2bd0714109fcf6ae7)
entity(nipype:d21ea66e2e0b11e2af1114109fcf6ae7, [prov:type='nipype:environment', nipype:OLDPWD="/software/temp/nipype-tutorial/temp", prov:label="OLDPWD"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ea66e2e0b11e2af1114109fcf6ae7)
entity(nipype:d21ea9e62e0b11e290f714109fcf6ae7, [prov:type='nipype:environment', nipype:OMP_NUM_THREADS="4", prov:label="OMP_NUM_THREADS"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ea9e62e0b11e290f714109fcf6ae7)
entity(nipype:d21eacae2e0b11e2b5e414109fcf6ae7, [prov:type='nipype:environment', nipype:OS="Darwin", prov:label="OS"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21eacae2e0b11e2b5e414109fcf6ae7)
entity(nipype:d21eafa62e0b11e28df714109fcf6ae7, [prov:type='nipype:environment', nipype:PATH="/software/virtualenvs.EPD/7.3/devpype/bin:/Library/Frameworks/EPD64.framework/Versions/Current/bin:/usr/local/fsl/bin:/usr/local/cuda/bin:/software/ANTSbin/bf4d983/:/software/camino/bin:/Users/satra/local/bin:/software/AFNI/:/Applications/freesurfer/bin:/Applications/freesurfer/fsfast/bin:/Applications/freesurfer/tktools:/usr/local/fsl/bin:/Applications/freesurfer/bin/freeview.app/Contents/MacOS/:/Applications/freesurfer/mni/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin:/usr/texbin", prov:label="PATH"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21eafa62e0b11e28df714109fcf6ae7)
entity(nipype:d21eb29e2e0b11e2b6aa14109fcf6ae7, [prov:type='nipype:environment', nipype:PERL5LIB="/Applications/freesurfer/mni/lib/../System/Library/Perl/5.8.6", prov:label="PERL5LIB"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21eb29e2e0b11e2b6aa14109fcf6ae7)
entity(nipype:d21eb5ab2e0b11e2939514109fcf6ae7, [prov:type='nipype:environment', nipype:PS1="(devpype)[\\u@\\h \\W$(__git_ps1 \" (%s)\")]\\$ ", prov:label="PS1"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21eb5ab2e0b11e2939514109fcf6ae7)
entity(nipype:d21eb8ab2e0b11e2a39814109fcf6ae7, [prov:type='nipype:environment', nipype:PWD="/software/temp/nipype-tutorial/temp/provenance", prov:label="PWD"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21eb8ab2e0b11e2a39814109fcf6ae7)
entity(nipype:d21ebb7d2e0b11e29c0e14109fcf6ae7, [prov:type='nipype:environment', nipype:SHELL="/bin/bash", prov:label="SHELL"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ebb7d2e0b11e29c0e14109fcf6ae7)
entity(nipype:d21ebea32e0b11e2aea514109fcf6ae7, [prov:type='nipype:environment', nipype:SHLVL="1", prov:label="SHLVL"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ebea32e0b11e2aea514109fcf6ae7)
entity(nipype:d21ec20a2e0b11e2810614109fcf6ae7, [prov:type='nipype:environment', nipype:SSH_AUTH_SOCK="/tmp/launch-coyBWu/Listeners", prov:label="SSH_AUTH_SOCK"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ec20a2e0b11e2810614109fcf6ae7)
entity(nipype:d21ec5352e0b11e2912114109fcf6ae7, [prov:type='nipype:environment', nipype:SUBJECTS_DIR="/Applications/freesurfer/subjects", prov:label="SUBJECTS_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ec5352e0b11e2912114109fcf6ae7)
entity(nipype:d21ec8422e0b11e2863814109fcf6ae7, [prov:type='nipype:environment', nipype:TERM="xterm-256color", prov:label="TERM"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ec8422e0b11e2863814109fcf6ae7)
entity(nipype:d21ecba82e0b11e2ae8914109fcf6ae7, [prov:type='nipype:environment', nipype:TERM_PROGRAM="Apple_Terminal", prov:label="TERM_PROGRAM"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ecba82e0b11e2ae8914109fcf6ae7)
entity(nipype:d21ecefa2e0b11e2908b14109fcf6ae7, [prov:type='nipype:environment', nipype:TERM_PROGRAM_VERSION="309", prov:label="TERM_PROGRAM_VERSION"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ecefa2e0b11e2908b14109fcf6ae7)
entity(nipype:d21ed22e2e0b11e2995014109fcf6ae7, [prov:type='nipype:environment', nipype:TERM_SESSION_ID="3106EB19-9EEE-4A50-89F0-CBD590E41054", prov:label="TERM_SESSION_ID"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ed22e2e0b11e2995014109fcf6ae7)
entity(nipype:d21ed5612e0b11e2866414109fcf6ae7, [prov:type='nipype:environment', nipype:TMPDIR="/var/folders/sm/488rz12j279_gyxrq7z971zw0000gn/T/", prov:label="TMPDIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ed5612e0b11e2866414109fcf6ae7)
entity(nipype:d21ed95c2e0b11e2952614109fcf6ae7, [prov:type='nipype:environment', nipype:USER="satra", prov:label="USER"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ed95c2e0b11e2952614109fcf6ae7)
entity(nipype:d21edc912e0b11e2880814109fcf6ae7, [prov:type='nipype:environment', nipype:VIRTUALENVWRAPPER_HOOK_DIR="/software/virtualenvs.EPD/7.3", prov:label="VIRTUALENVWRAPPER_HOOK_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21edc912e0b11e2880814109fcf6ae7)
entity(nipype:d21edfe32e0b11e286de14109fcf6ae7, [prov:type='nipype:environment', nipype:VIRTUALENVWRAPPER_LOG_DIR="/software/virtualenvs.EPD/7.3", prov:label="VIRTUALENVWRAPPER_LOG_DIR"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21edfe32e0b11e286de14109fcf6ae7)
entity(nipype:d21ee3192e0b11e2848b14109fcf6ae7, [prov:type='nipype:environment', nipype:VIRTUALENVWRAPPER_PROJECT_FILENAME=".project", prov:label="VIRTUALENVWRAPPER_PROJECT_FILENAME"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ee3192e0b11e2848b14109fcf6ae7)
entity(nipype:d21ee6232e0b11e2820e14109fcf6ae7, [prov:type='nipype:environment', nipype:VIRTUAL_ENV="/software/virtualenvs.EPD/7.3/devpype", prov:label="VIRTUAL_ENV"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ee6232e0b11e2820e14109fcf6ae7)
entity(nipype:d21ee94f2e0b11e280e514109fcf6ae7, [prov:type='nipype:environment', nipype:WORKON_HOME="/software/virtualenvs.EPD/7.3", prov:label="WORKON_HOME"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ee94f2e0b11e280e514109fcf6ae7)
entity(nipype:d21eecb32e0b11e2ba6214109fcf6ae7, [prov:type='nipype:environment', nipype:_="/software/virtualenvs.EPD/7.3/devpype/bin/ipython", prov:label="_"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21eecb32e0b11e2ba6214109fcf6ae7)
entity(nipype:d21ef1b32e0b11e296d814109fcf6ae7, [prov:type='nipype:environment', nipype:__CF_USER_TEXT_ENCODING="0x1F5:0:0", prov:label="__CF_USER_TEXT_ENCODING"])
hadMember(nipype:d21e243a2e0b11e2914a14109fcf6ae7, nipype:d21ef1b32e0b11e296d814109fcf6ae7)
collection(nipype:d21ef4472e0b11e2a59a14109fcf6ae7, [prov:type='nipype:inputs'])
used(nipype:d21d596e2e0b11e2a1c714109fcf6ae7, nipype:d21ef4472e0b11e2a59a14109fcf6ae7, -)
entity(nipype:d21ef91e2e0b11e28d2814109fcf6ae7, [prov:type='nipype:input', nipype:environ=""FSLOUTPUTTYPE": "NIFTI_GZ"", prov:label="environ"])
hadMember(nipype:d21ef4472e0b11e2a59a14109fcf6ae7, nipype:d21ef91e2e0b11e28d2814109fcf6ae7)
entity(nipype:d21efc8f2e0b11e2836414109fcf6ae7, [prov:type='nipype:input', nipype:ignore_exception="als", prov:label="ignore_exception"])
hadMember(nipype:d21ef4472e0b11e2a59a14109fcf6ae7, nipype:d21efc8f2e0b11e2836414109fcf6ae7)
entity(nipype:d21effb02e0b11e2888c14109fcf6ae7, [prov:type='nipype:input', nipype:in_file="struct.nii", prov:label="in_file"])
hadMember(nipype:d21ef4472e0b11e2a59a14109fcf6ae7, nipype:d21effb02e0b11e2888c14109fcf6ae7)
entity(nipype:d21f03472e0b11e2844514109fcf6ae7, [prov:type='nipype:input', nipype:output_type="NIFTI_GZ", prov:label="output_type"])
hadMember(nipype:d21ef4472e0b11e2a59a14109fcf6ae7, nipype:d21f03472e0b11e2844514109fcf6ae7)
collection(nipype:d21f065e2e0b11e2873a14109fcf6ae7, [prov:type='nipype:outputs'])
wasGeneratedBy(nipype:d21f065e2e0b11e2873a14109fcf6ae7, nipype:d21d596e2e0b11e2a1c714109fcf6ae7, -)
entity(nipype:d21f0ad92e0b11e2b1ee14109fcf6ae7, [prov:type='nipype:output', nipype:out_file="/software/temp/nipype-tutorial/temp/provenance/struct_brain.nii.gz", prov:label="out_file"])
hadMember(nipype:d21f065e2e0b11e2873a14109fcf6ae7, nipype:d21f0ad92e0b11e2b1ee14109fcf6ae7)
collection(nipype:d21f0d852e0b11e2bd8614109fcf6ae7, [prov:type='nipype:runtime'])
wasGeneratedBy(nipype:d21f0d852e0b11e2bd8614109fcf6ae7, nipype:d21d596e2e0b11e2a1c714109fcf6ae7, -)
agent(nipype:d21f10d42e0b11e2a6be14109fcf6ae7, [prov:type='prov:Person', foaf:name="satra", prov:label="satra"])
agent(nipype:d22ef2112e0b11e2b77b14109fcf6ae7, [nipype:scipy_version="0.10.1", nipype:networkx_version="1.7", prov:label="Nipype", prov:type='prov:SoftwareAgent', nipype:commit_hash="7015ffa263bb1d43895908e881299e37199f497f", nipype:pkg_path="/software/nipy-repo/nipype/nipype", nipype:sys_platform="darwin", nipype:numpy_version="1.6.1", nipype:traits_version="4.2.0", nipype:sys_executable="/software/virtualenvs.EPD/7.3/devpype/bin/python", foaf:name="Nipype", nipype:commit_source="repository", nipype:sys_version="2.7.3 |CUSTOM| (default, Apr 12 2012, 11:14:05) \n[GCC 4.0.1 (Apple Inc. build 5493)]", nipype:nibabel_version="1.4.0dev"])
wasAssociatedWith(nipype:d21d596e2e0b11e2a1c714109fcf6ae7, nipype:d21f10d42e0b11e2a6be14109fcf6ae7, -, [prov:Role="LoggedInUser"])
wasAssociatedWith(nipype:d21d596e2e0b11e2a1c714109fcf6ae7, nipype:d22ef2112e0b11e2b77b14109fcf6ae7, -, [prov:Role="Software"])
endBundle
Raw
environ_single_entity.provn
bundle
prefix foaf <http://xmlns.com/foaf/0.1/>
prefix nipype <http://nipy.org/nipype/terms/0.6>
prefix dcterms <http://purl.org/dc/terms/>
activity(84d6f2a82b7c11e2a42214109fcf6ae7, 2012-11-10T21:20:49.658592, 2012-11-10T21:20:57.914642, [nipype:command="bet struct.nii /software/temp/nipype-tutorial/temp/provenance/struct_brain.nii.gz", prov:label="BET", prov:type='nipype:BET', nipype:working_directory="/software/temp/nipype-tutorial/temp/provenance", nipype:return_code=0, nipype:duration=0.0, foaf:host="warpspeed.local"])
entity(84d7bb702b7c11e29fb514109fcf6ae7, [prov:type='nipype:environment', nipype:environ_json="{"FSLDIR": "/usr/local/fsl", "__CF_USER_TEXT_ENCODING": "0x1F5:0:0", "TERM_PROGRAM_VERSION": "309", "SUBJECTS_DIR": "/Applications/freesurfer/subjects", "FSLREMOTECALL": "", "USER": "satra", "FSL_BIN": "/usr/local/fsl/bin", "HOME": "/Users/satra", "PATH": "/software/virtualenvs.EPD/7.3/devpype/bin:/Library/Frameworks/EPD64.framework/Versions/Current/bin:/usr/local/fsl/bin:/usr/local/cuda/bin:/software/ANTSbin/bf4d983/:/software/camino/bin:/Users/satra/local/bin:/software/AFNI/:/Applications/freesurfer/bin:/Applications/freesurfer/fsfast/bin:/Applications/freesurfer/tktools:/usr/local/fsl/bin:/Applications/freesurfer/bin/freeview.app/Contents/MacOS/:/Applications/freesurfer/mni/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin:/usr/texbin", "PS1": "(devpype)[\\u@\\h \\W$(__git_ps1 \" (%s)\")]\\$ ", "DISPLAY": ":1", "TERM_PROGRAM": "Apple_Terminal", "LANG": "en_US.UTF-8", "FSLLOCKDIR": "", "TERM": "xterm-256color", "SHELL": "/bin/bash", "FMRI_ANALYSIS_DIR": "/Applications/freesurfer/fsfast", "FSF_OUTPUT_FORMAT": "nii.gz", "Apple_Ubiquity_Message": "/tmp/launch-1myPfP/Apple_Ubiquity_Message", "SHLVL": "1", "ANTSPATH": "/software/ANTSbin/bf4d983/", "PWD": "/software/temp/nipype-tutorial/temp/provenance", "FSLMACHINELIST": "", "FREESURFER_HOME": "/Applications/freesurfer", "TMPDIR": "/var/folders/sm/488rz12j279_gyxrq7z971zw0000gn/T/", "MNI_PERL5LIB": "/Applications/freesurfer/mni/lib/../System/Library/Perl/5.8.6", "FSLWISH": "/usr/local/fsl/bin/fslwish", "MKL_NUM_THREADS": "4", "WORKON_HOME": "/software/virtualenvs.EPD/7.3", "TERM_SESSION_ID": "3106EB19-9EEE-4A50-89F0-CBD590E41054", "MINC_BIN_DIR": "/Applications/freesurfer/mni/bin", "VIRTUALENVWRAPPER_PROJECT_FILENAME": ".project", "FSFAST_HOME": "/Applications/freesurfer/fsfast", "SSH_AUTH_SOCK": "/tmp/launch-coyBWu/Listeners", "CLASSPATH": "/Users/satra/local/jar/MINE.jar:/Users/satra/local/jar/commons-io-2.3.jar", "VIRTUAL_ENV": "/software/virtualenvs.EPD/7.3/devpype", "DYLD_LIBRARY_PATH": "/usr/local/cuda/lib:/usr/local/lib/vtk-5.10/", "Apple_PubSub_Socket_Render": "/tmp/launch-dRHB8R/Render", "MINC_LIB_DIR": "/Applications/freesurfer/mni/lib", "_": "/software/virtualenvs.EPD/7.3/devpype/bin/ipython", "VIRTUALENVWRAPPER_HOOK_DIR": "/software/virtualenvs.EPD/7.3", "FSLCONFDIR": "/usr/local/fsl/config", "PERL5LIB": "/Applications/freesurfer/mni/lib/../System/Library/Perl/5.8.6", "CAMINOPATH": "/software/camino/bin", "VIRTUALENVWRAPPER_LOG_DIR": "/software/virtualenvs.EPD/7.3", "OMP_NUM_THREADS": "4", "MNI_DIR": "/Applications/freesurfer/mni", "OLDPWD": "/software/temp/nipype-tutorial/temp", "FSLTCLSH": "/usr/local/fsl/bin/fsltclsh", "FIX_VERTEX_AREA": "", "MNI_DATAPATH": "/Applications/freesurfer/mni/data", "FSL_DIR": "/usr/local/fsl", "FSLMACHTYPE": "apple-darwin11-gcc4.2", "FSLOUTPUTTYPE": "NIFTI_GZ", "FSLMULTIFILEQUIT": "TRUE", "LOCAL_DIR": "/Applications/freesurfer/local", "LOGNAME": "satra", "COMMAND_MODE": "unix2003", "OS": "Darwin", "FUNCTIONALS_DIR": "/Applications/freesurfer/sessions", "FS_OVERRIDE": "0"}"])
used(84d6f2a82b7c11e2a42214109fcf6ae7, 84d7bb702b7c11e29fb514109fcf6ae7, -)
collection(84d7c4b02b7c11e28d1414109fcf6ae7, [prov:type='nipype:inputs'])
used(84d6f2a82b7c11e2a42214109fcf6ae7, 84d7c4b02b7c11e28d1414109fcf6ae7, -)
entity(84d7d1e62b7c11e2998b14109fcf6ae7, [prov:type='nipype:input', nipype:environ="{'FSLOUTPUTTYPE': 'NIFTI_GZ'}", prov:label="environ"])
memberOf(84d7c4b02b7c11e28d1414109fcf6ae7, 84d7d1e62b7c11e2998b14109fcf6ae7)
entity(84d7d5e12b7c11e2910f14109fcf6ae7, [prov:type='nipype:input', nipype:ignore_exception="False", prov:label="ignore_exception"])
memberOf(84d7c4b02b7c11e28d1414109fcf6ae7, 84d7d5e12b7c11e2910f14109fcf6ae7)
entity(84d7d95c2b7c11e2adaa14109fcf6ae7, [prov:type='nipype:input', nipype:in_file="struct.nii", prov:label="in_file"])
memberOf(84d7c4b02b7c11e28d1414109fcf6ae7, 84d7d95c2b7c11e2adaa14109fcf6ae7)
entity(84d7dc8f2b7c11e2a84714109fcf6ae7, [prov:type='nipype:input', nipype:output_type="NIFTI_GZ", prov:label="output_type"])
memberOf(84d7c4b02b7c11e28d1414109fcf6ae7, 84d7dc8f2b7c11e2a84714109fcf6ae7)
collection(84d7df732b7c11e2ba5e14109fcf6ae7, [prov:type='nipype:outputs'])
wasGeneratedBy(84d7df732b7c11e2ba5e14109fcf6ae7, 84d6f2a82b7c11e2a42214109fcf6ae7, -)
entity(84d7e3ab2b7c11e2b37614109fcf6ae7, [prov:type='nipype:output', nipype:out_file="/software/temp/nipype-tutorial/temp/provenance/struct_brain.nii.gz", prov:label="out_file"])
memberOf(84d7df732b7c11e2ba5e14109fcf6ae7, 84d7e3ab2b7c11e2b37614109fcf6ae7)
collection(84d7e6872b7c11e2b77814109fcf6ae7, [prov:type='nipype:runtime'])
wasGeneratedBy(84d7e6872b7c11e2b77814109fcf6ae7, 84d6f2a82b7c11e2a42214109fcf6ae7, -)
agent(84d7e98a2b7c11e2b0d114109fcf6ae7, [prov:type='prov:Person', foaf:name="satra", prov:label="satra"])
agent(84e634de2b7c11e2883114109fcf6ae7, [nipype:scipy_version="0.10.1", nipype:networkx_version="1.7", prov:label="Nipype", prov:type='prov:SoftwareAgent', nipype:commit_hash="6795d84", nipype:pkg_path="/software/nipy-repo/nipype/nipype", nipype:sys_platform="darwin", nipype:numpy_version="1.6.1", nipype:traits_version="4.2.0", nipype:sys_executable="/software/virtualenvs.EPD/7.3/devpype/bin/python", foaf:name="Nipype", nipype:commit_source="repository", nipype:sys_version="2.7.3 |CUSTOM| (default, Apr 12 2012, 11:14:05)
[GCC 4.0.1 (Apple Inc. build 5493)]", nipype:nibabel_version="1.4.0dev"])
wasAssociatedWith(84d6f2a82b7c11e2a42214109fcf6ae7, 84d7e98a2b7c11e2b0d114109fcf6ae7, -, [prov:Role="LoggedInUser"])
wasAssociatedWith(84d6f2a82b7c11e2a42214109fcf6ae7, 84e634de2b7c11e2883114109fcf6ae7, -, [prov:Role="Software"])
endBundle
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