Created
August 13, 2016 15:44
-
-
Save seandavi/02baa017c34205327ac0dfeeb4a67860 to your computer and use it in GitHub Desktop.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
task fastqc { | |
File fastq | |
command { | |
fastqc ${fastq} | |
} | |
output { | |
Array[File] results = glob("*html") | |
} | |
runtime | |
{ | |
docker : "seandavi/fastqc" | |
memory: "2 GB" | |
defaultDisks: "local-disk 10 SSD" | |
} | |
} | |
workflow test { | |
call fastqc | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment