Wei Shen shenwei356

Configure Git to use a proxy

In Brief

You may need to configure a proxy server if you're having trouble cloning or fetching from a remote repository or getting an error like unable to access '...' Couldn't resolve host '...'.

Consider something like:

	#!/usr/bin/env perl
	#
	# rotates and (if necessary reverse complements) an assembly of a circular genome
	# so that it starts with the sequence having the best blast hit to a gene database,
	# e.g. dnaA
	#
	# depends on blastn being installed
	#
	# Example usage:
	# rotate_assembly.pl assembly.fasta dnaA.fa > rotated_assembly.fa

	#include "textflag.h"

	// func PospopcntMem(counts *[8]int32, buf []byte)
	TEXT ·PospopcntMem(SB),NOSPLIT,$0-32
	MOVQ counts+0(FP), DI
	MOVQ buf_base+8(FP), SI // SI = &buf[0]
	MOVQ buf_len+16(FP), CX // CX = len(buf)

	SUBQ $32, CX // pre-subtract 32 bit from CX
	JL scalar

	#define _XOPEN_SOURCE 700
	#include <stdio.h>
	#include <stdlib.h>
	#include <string.h>
	#include <time.h>

	extern void pospopcnt_reg(int accum[8], const char *buf, size_t len);
	extern void pospopcnt_mem(int accum[8], const char *buf, size_t len);

	extern void

	# Create `gh-pages` branch from scratch

	cd <dir>
	git init
	git remote add origin <url>
	git checkout --orphan gh-pages

	git add .
	git commit -m "build 1.0.0"
	git push origin gh-pages

	#!/bin/sh

	while read file; do
	if [[ $string =~ .=. ]]; then
	continue
	fi

	t=$(exiftool "$file" \
	\| grep "^Create Date" \| head -n 1 \
	\| sed -r "s/\s+/ /g" \| cut -d " " -f 4 \

	# ====================
	# Project Makefile
	# ====================
	# User Configuration {{{1
	# ====================

	# Major targets {{{2
	.PHONY: figs res
	figs:
	# [Partially redacted]

	<!DOCTYPE html>
	<html>
	<head>
	<meta http-equiv="content-type" content="text/html; charset=UTF-8">
	<title>Todo Vue.js Example</title>
	<link rel="stylesheet"
	type="text/css"
	href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.5/css/bootstrap.min.css">
	<script src="https://cdn.jsdelivr.net/vue/latest/vue.js"></script>
	<style type="text/css">

	package main

	import (
	"bufio"
	"encoding/csv"
	"encoding/json"
	"fmt"
	"io"
	"os"
	"path/filepath"

	<p>
	My programming language of preference is python for the simple reason that I feel I write better code faster with it then I do with other languages. However also has a lot of nice tricks and idioms to do things well. And partly as a reminder to myself to use them, and partly because I thought this might be of general interest I have put together this collection of some of my favourite idioms. I am also putting this on <a href="https://gist.github.com/codefisher/9d7993ddbf404c505128">gist.github.com</a> so that anyone that wants to contribute there own things can, and I will try and keep this post up to date.
	</p>

	<h2>enumerate</h2>

	<p>
	A fairly common thing to do is loop over a list while also keeping track of what index we are up to. Now we could use a <code>count</code> variable, but python gives us a nicer syntax for this with the <code>enumerate()</code> function.

	<script src="https://gist.github.com/codefisher/9d7993ddbf404c505128.js?file=enumerate.py"></script>