Sina Mansour L. sina-mansour

🧠

🤹🧠 Juggling brains!

Network science enthusiast studying connectomics

sina-mansour / blender_visualization_subcortex_with_glass_brain.py

Created October 21, 2024 08:22

	# Blender executed via:
	# PYTHONPATH=/home/sina/miniconda3/envs/blender_env/bin/python blender --python-use-system-env

	# Notes:
	# Setting up blender to use a conda virtualenv:
	# https://stackoverflow.com/questions/70639689/how-to-use-the-anaconda-environment-on-blender
	# Blender Python API:
	# https://docs.blender.org/api/current/info_quickstart.html
	# Blender Python tips and tricks:
	# https://docs.blender.org/api/current/info_tips_and_tricks.html

sina-mansour / blender_visualization_cloth_simulation.py

Created September 30, 2024 05:02

A blender 4.2 python script for cloth simulation along with a transparent brain surface rendered by cycles engine

	# Blender executed via:
	# PYTHONPATH=/home/sina/miniconda3/envs/blender_env/bin/python blender --python-use-system-env

	# Notes:
	# Setting up blender to use a conda virtualenv:
	# https://stackoverflow.com/questions/70639689/how-to-use-the-anaconda-environment-on-blender
	# Blender Python API:
	# https://docs.blender.org/api/current/info_quickstart.html
	# Blender Python tips and tricks:
	# https://docs.blender.org/api/current/info_tips_and_tricks.html

sina-mansour / blender_visualization.py

Created September 23, 2024 04:39

Example scripts linking Python and Blender for neuroimaging visualization

	import bpy
	import math
	import numpy as np
	import nibabel as nib
	import matplotlib.pyplot as plt
	from Connectome_Spatial_Smoothing import CSS as css
	from cerebro import cerebro_brain_utils as cbu
	from cerebro import cerebro_brain_viewer as cbv