sirselim
/ CD19_MS_EWAS.csv
Created
October 7, 2018 21:48
Ugly R script to generate differential methylation circos plots
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| IlmnID Infinium_Design_Type Genome_Build CHR MAPINFO Probe_SNPs Probe_SNPs_10 UCSC_RefGene_Name ks.score ks.pval logP median_MS median_HC median_diff abs_median_diff adjP UCSC_RefGene_Group | |
| cg19159092 II 37 1 856059 rs28534711 FLJ39609 0.54 0.001401357 2.853451255 0.369697583 0.235456657 0.134 0.134 1 TSS1500 | |
| cg01394461 II 37 1 887576 NOC2L 0.58 0.000405656 3.391842167 0.605999215 0.765577211 -0.16 0.16 1 Body | |
| cg24004483 I 37 1 944783 0.42 0.029913567 1.524131795 0.421027063 0.567238531 -0.146 0.146 1 | |
| cg22627753 II 37 1 988623 AGRN 0.5 0.00432085 2.364430777 0.791366927 0.61083939 0.181 0.181 1 Body | |
| cg09864227 I 37 1 1008207 0.58 0.000405656 3.391842167 0.826697106 0.724967037 0.102 0.102 1 | |
| cg00300303 II 37 1 1067223 0.5 0.00432085 2.364430777 0.623355286 0.774244123 -0.151 0.151 1 | |
| cg15822328 II 37 1 1072197 0.5 0.00432085 2.364430777 0.431884651 0.270809266 0.161 0.161 1 | |
| cg08474826 II 37 1 1099630 0.42 0.029913567 1.524131795 0.587936074 0.446153689 0.142 0.142 1 | |
| cg06967105 II 37 1 1 |
tuffacton
/ streamlit_colab.ipynb
Last active
March 7, 2024 05:47
Colaboratory Notebook that hosts a streamlit app and creates an ngrok https tunnel for access.
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jduckles
/ textexpander.sh
Last active
June 27, 2024 13:14
Takes a URL and grabs the <title></title> contents to provide a Markdown Link using the title of the page. Used as a TextExpander Shortcut to paste links into Markdown Files with the page title as the link text.
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| #! /bin/bash | |
| # Python Script to pull down title of web page and enter it into a markdown snippet. | |
| ~/bin/url2mdlink.py %clipboard |